Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins
Authors:
- Mark R. BleackleyMBMark R. Bleackley
- Shaily VasaSVShaily Vasa
- Peta J. HarveyPHPeta J. Harvey
- Thomas M. A. ShafeeTSThomas M. A. Shafee
- Bomai K. KerengaBKBomai K. Kerenga
- Tatiana P. Soares da CostaTatiana P. Soares da Costa
- David J. CraikDCDavid J. Craik
- Rohan G. T. LoweRLRohan G. T. Lowe
- Marilyn A. AndersonMAMarilyn A. Anderson
Open Access
- 24 August 2020
- journal article
- research article
- Published by MDPI AG in Journal of Fungi
- Vol. 6 (3) , 145
Abstract
Plant defensins are best known for their antifungal activity and contribution to the plant immune system. The defining feature of plant defensins is their three-dimensional structure known as the cysteine stabilized alpha-beta motif. This protein fold is remarkably tolerant to sequence variation with only the eight cysteines that contribute to the stabilizing disulfide bonds absolutely conserved across the family. Mature defensins are typically 46–50 amino acids in length and are enriched in lysine and/or arginine residues. Examination of a database of approximately 1200 defensin sequences revealed a subset of defensin sequences that were extended in length and were enriched in histidine residues leading to their classification as histidine-rich defensins (HRDs). Using these initial HRD sequences as a query, a search of the available sequence databases identified over 750 HRDs in solanaceous plants and 20 in brassicas. Histidine residues are known to contribute to metal binding functions in proteins leading to the hypothesis that HRDs would have metal binding properties. A selection of the HRD sequences were recombinantly expressed and purified and their antifungal and metal binding activity was characterized. Of the four HRDs that were successfully expressed all displayed some level of metal binding and two of four had antifungal activity. Structural characterization of the other HRDs identified a novel pattern of disulfide linkages in one of the HRDs that is predicted to also occur in HRDs with similar cysteine spacing. Metal binding by HRDs represents a specialization of the plant defensin fold outside of antifungal activity.Keywords
Funding Information
- Australian Research Council (FL150100146, DE190100806)
This publication has 52 references indexed in Scilit:
- Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networksJournal of Biomolecular NMR, 2013
- De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamianaPLOS ONE, 2013
- Properties and mechanisms of action of naturally occurring antifungal peptidesCellular and Molecular Life Sciences, 2013
- Dimerization of Plant Defensin NaD1 Enhances Its Antifungal ActivityJournal of Biological Chemistry, 2012
- phangorn: phylogenetic analysis in RBioinformatics, 2010
- MolProbity: all-atom structure validation for macromolecular crystallographyActa Crystallographica Section D Structural Biology, 2009
- Version 1.2 of the Crystallography and NMR systemNature Protocols, 2007
- The SWISS-MODEL workspace: a web-based environment for protein structure homology modellingBioinformatics, 2005
- Metal binding by citrus dehydrin with histidine-rich domainsJournal of Experimental Botany, 2005
- Zinc and copper bind to unique sites of histatin 5FEBS Letters, 2001