Clinical Versus Research Sequencing
Authors:
- 16 September 2016
- journal article
- review article
- Published by Cold Spring Harbor Laboratory in Cold Spring Harbor Perspectives in Medicine
- Vol. 6 (11) , a025809
Abstract
Historically, sequencing has been the key technology to assess variation in the genetic code, and has been widely accepted in clinical diagnostics of genetic disease. The advent of next-generation sequencing (NGS) methods increased the size of the analyzed target by several orders of magnitude, while at the same time drastically reducing the cost of sequencing. Current research allows sequencing of germline and tumor whole genomes. However, with the arrival of cutting-edge technology to the clinical diagnostic field, strict regulatory oversight is required to use the advances of the latest research when applied to routine clinical practice. We discuss the differences between sequencing in a research setting and sequencing in a clinical diagnostics setting, as applied to next-generation technology.Keywords
This publication has 36 references indexed in Scilit:
- The NIH genetic testing registry: a new, centralized database of genetic tests to enable access to comprehensive information and improve transparencyNucleic Acids Research, 2012
- Disease gene identification strategies for exome sequencingEuropean Journal of Human Genetics, 2012
- Accurate and comprehensive sequencing of personal genomesGenome Research, 2011
- Detection and quantification of rare mutations with massively parallel sequencingProceedings of the National Academy of Sciences, 2011
- Molecular Predictors of Response to Chemotherapy in Colorectal CancerThe Cancer Journal, 2011
- Genome-wide in situ exon capture for selective resequencingNature Genetics, 2007
- Direct selection of human genomic loci by microarray hybridizationNature Methods, 2007
- Multiplex amplification of large sets of human exonsNature Methods, 2007
- Microarray-based genomic selection for high-throughput resequencingNature Methods, 2007
- Multigene amplification and massively parallel sequencing for cancer mutation discoveryProceedings of the National Academy of Sciences, 2007