Depletion and pair interactions of proteins in polymer solutions
- 15 April 2005
- journal article
- research article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 122 (15) , 154901
Abstract
We study the depletion, pair interaction, and phase behavioral characteristics of proteins in polymer solutions. We use a McMillan–Mayer-like approach [W. G. McMillan, Jr. and J. E. Mayer, J. Chem. Phys. 13, 276 (1945)] to suggest that the depletion characteristics should be studied at an effective polymer concentration which is a function of both the average polymer and the protein concentrations. In the protein limit, we show that the volume of the polymer depletion layers exceeds the size of the proteins, leading to effective polymer concentrations typically in the semidilute and concentrated regimes even when the average polymer concentrations are in the dilute regimes. We propose an approximate approach that accounts for the multibody depletion overlaps, and use an accurate numerical solution of polymer mean-field theory to address depletion characteristics in these regimes which are characterized by both the importance of polymer interactions as well as the curvature of the proteins relative to the correlation length of polymers. We show that the depletion characteristics of the protein-polymer mixture can be quite different when viewed in this framework, and this can have profound consequences for the phase behavior of the mixture. Our theoretical predictions for the phase diagram match semiquantitatively with published experimental results.Keywords
This publication has 61 references indexed in Scilit:
- Effect of Crowding on Protein–Protein Association Rates: Fundamental Differences between Low and High Mass Crowding AgentsJournal of Molecular Biology, 2004
- Influence of Polymer-Excluded Volume on the Phase-Behavior of Colloid-Polymer MixturesPhysical Review Letters, 2002
- Protein crystallization induced by polyethylene glycol: A model study using apoferritinThe Journal of Chemical Physics, 2002
- Structure of colloid-polymer suspensionsJournal of Physics: Condensed Matter, 2002
- Concentration Fluctuations in a Model Colloid−Polymer Suspension: Experimental Tests of Depletion TheoriesLangmuir, 2002
- Structure and thermodynamics of colloid-polymer mixtures: A macromolecular approachEurophysics Letters, 2000
- Interactions and phase transitions in protein solutionsCurrent Opinion in Colloid & Interface Science, 2000
- Protein−Macromolecule InteractionsMacromolecules, 1996
- Phase behavior of a model colloid-polymer mixturePhysical Review E, 1995
- Computer simulation of polymer-induced clustering of colloidsPhysical Review Letters, 1991