Technology transfer from worms and flies to vertebrates: transposition-based genome manipulations and their future perspectives
Authors:
Open Access
- 31 October 2007
- journal article
- review article
- Published by Springer Nature in Genome Biology
- Vol. 8 (Suppl 1) , S1-19
Abstract
To meet the increasing demand of linking sequence information to gene function in vertebrate models, genetic modifications must be introduced and their effects analyzed in an easy, controlled, and scalable manner. In the mouse, only about 10% (estimate) of all genes have been knocked out, despite continuous methodologic improvement and extensive effort. Moreover, a large proportion of inactivated genes exhibit no obvious phenotypic alterations. Thus, in order to facilitate analysis of gene function, new genetic tools and strategies are currently under development in these model organisms. Loss of function and gain of function mutagenesis screens based on transposable elements have numerous advantages because they can be applied in vivo and are therefore phenotype driven, and molecular analysis of the mutations is straightforward. At present, laboratory harnessing of transposable elements is more extensive in invertebrate models, mostly because of their earlier discovery in these organisms. Transposons have already been found to facilitate functional genetics research greatly in lower metazoan models, and have been applied most comprehensively in Drosophila. However, transposon based genetic strategies were recently established in vertebrates, and current progress in this field indicates that transposable elements will indeed serve as indispensable tools in the genetic toolkit for vertebrate models. In this review we provide an overview of transposon based genetic modification techniques used in higher and lower metazoan model organisms, and we highlight some of the important general considerations concerning genetic applications of transposon systems.Keywords
This publication has 129 references indexed in Scilit:
- Target-site Preferences of Sleeping Beauty TransposonsJournal of Molecular Biology, 2005
- Targeted gene alteration in Caenorhabditis elegans by gene conversionNature Genetics, 2004
- Tol2 transposon‐mediated enhancer trap to identify developmentally regulated zebrafish genes in vivoDevelopmental Dynamics, 2004
- Checks and balancers: balancer chromosomes to facilitate genome annotationTrends in Genetics, 2004
- A protein trap strategy to detect GFP-tagged proteins expressed from their endogenous loci in DrosophilaProceedings of the National Academy of Sciences, 2001
- Engineering chromosomal rearrangements in miceNature Reviews Genetics, 2001
- Effective targeted gene ‘knockdown’ in zebrafishNature Genetics, 2000
- Sleeping Beauty , a wide host-range transposon vector for genetic transformation in vertebrates 1 1Edited by J. KarnJournal of Molecular Biology, 2000
- Autoregulation of mariner transposase activity by overproduction and dominant-negative complementationMolecular Biology and Evolution, 1996
- Variable Patterns of Transposition of the Maize Element Activator in Tobacco.The Plant Cell, 1991