The complete mitochondrial genome of Pseudopimelodus schultzi Dahl 1955 (Siluriformes, Pseudopimelodidae) and its phylogenetic position within Pseudopimelodidae
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Open Access
- 1 August 2021
- journal article
- research article
- Published by Taylor & Francis in Mitochondrial DNA Part B
- Vol. 6 (8) , 2206-2208
Abstract
The complete mitochondrial DNA genome of Pseudopimelodus schultzi was first was determined in this study. The entire length of mitochondrial genome consists of 13 protein-codinggenes (PCG), 2 ribosomal RNA genes (rRNA), and 22 transfer RNA (tRNA) genes and control region. The nucleotide composition was made up of 32.2% A, 25.9% T, 26.7% C, and 15.2% G, respectively, indicating an A + T (58.1%)-rich feature. With the exception of 8 tRNA genes and NADH6, mitochondrial genes are encoded on the heavy strand, which was similar to that in other vertebrates. The results showed that the species of Pseudopimelodidae were gathered in the same branch. The phylogenies indicate monophyly of the genus Batrochoglanis, Batrochoglanis and Microglanis, respectively.Keywords
This publication has 9 references indexed in Scilit:
- MitoFish and MiFish Pipeline: A Mitochondrial Genome Database of Fish with an Analysis Pipeline for Environmental DNA MetabarcodingMolecular Biology and Evolution, 2018
- tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genesNucleic Acids Research, 2016
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger DatasetsMolecular Biology and Evolution, 2016
- Full-length transcriptome assembly from RNA-Seq data without a reference genomeNature Biotechnology, 2011
- A scalable, fully automated process for construction of sequence-ready human exome targeted capture librariesGenome Biology, 2011
- Automatic annotation of organellar genomes with DOGMABioinformatics, 2004
- Osteology and myology of the cephalic region and pectoral girdle of Batrochoglanis raninus, with a discussion on the synapomorphies and phylogenetic relationships of the Pseudopimelodinae and Pimelodidae (Teleostei: Siluriformes)Animal Biology, 2004
- Gladioglanis conquistador N. Sp. from Ecuador with Diagnoses of the Subfamilies Rhamdiinae Bleeker and Pseudopimelodinae N. Subf. (Siluriformes: Pimelodidae)Copeia, 1991