Reprogramming energy system for growth and bioproduction from CO₂ and methanol in Escherichia coli
Open Access
- 26 September 2026
- journal article
- research article
- Published by Springer Nature in Nature Communications
- Vol. 17 (1) , 10231
Abstract
Microbial CO₂ assimilation provides a strategy for sustainable biomanufacturing. However, CO₂ reduction requires substantial energy input, while native energy systems are tightly regulated and extensively consumed by endogenous metabolism, limiting assimilation efficiency. Here, we design and construct an orthogonal energy system in Escherichia coli, achieving an intracellular NUDH concentration exceeding 7.0 mM and an NUDH/NUD⁺ ratio above 55. Subsequently, we design a CO₂-formate-acetyl-CoA-pyruvate-malate pathway and reprogram key enzymes for NUDH-dependent operation. Integration of the OES-driven CAM* pathway with a rationally rewired native electron transport chain supports growth of the engineered E. coli on CO₂ and methanol, with a doubling time of 8.6 ± 0.3 h and a maximum OD₆₀₀ of 37.5 ± 5.8. Moreover, the platform extends CO₂ assimilation to biosynthesis of multiple chemicals from distinct CAM* pathway nodes, including mevalonate, lactate, 2,3-butanediol, and succinate. Together, these results establish a framework for reprogramming microbial energy metabolism and expanding one-carbon biotransformation.Keywords
This publication has 86 references indexed in Scilit:
- Progress in one-carbon metabolism: Clostridium in green biomanufacturingFrontiers of Chemical Science and Engineering, 2025
- Light‐Driven Carbon Fixation Using Photosynthetic Organelles in Artificial Photosynthetic CellsAngewandte Chemie International Edition, 2025
- A review on recent advancements in biochemical fixation and transformation of CO2 into constructive productsBiochemical Engineering Journal, 2024
- L-lysine production by systems metabolic engineering of an NADPH auto-regulated Corynebacterium glutamicumBioresource Technology, 2023
- Evaluation and optimization of quantitative analysis of cofactors from yeast by liquid chromatography/mass spectrometryAnalytica Chimica Acta, 2022
- Quantification of NAD(P)H in cyanobacterial cells by a phenol extraction methodPhotosynthesis Research, 2021
- carba Nicotinamide Adenine Dinucleotide Phosphate: Robust Cofactor for Redox BiocatalysisAngewandte Chemie International Edition, 2021
- Redox cofactor engineering in industrial microorganisms: strategies, recent applications and future directionsJournal of Industrial Microbiology and Biotechnology, 2018
- Emissive Synthetic Cofactors: Enzymatic Interconversions of tzA Analogues of ATP, NAD+, NADH, NADP+, and NADPHAngewandte Chemie International Edition, 2017
- Mutations that alter the allosteric nature of cAMP receptor protein of Escherichia coli.The EMBO Journal, 1985