Epigenetic modifications of SOX2 enhancers, SRR1 and SRR2, correlate with in vitro neural differentiation
- 21 February 2008
- journal article
- research article
- Published by Wiley in Journal of Neuroscience Research
- Vol. 86 (8) , 1680-1693
Abstract
SOX2 is a key neurodevelopmental gene involved in maintaining the pluripotency of stem cells and proliferation of neural progenitors and astroglia. Two evolutionally conserved enhancers, SRR1 and SRR2, are involved in controlling SOX2 expression during neurodevelopment; however, the molecular mechanisms regulating their activity are not known. We have examined DNA methylation and histone H3 acetylation at both enhancers in NT2‐D1 progenitors, neurons and astrocytes, to establish the role of epigenetic mechanisms in cell‐type‐specific SOX2 expression. This study showed that 1) unmethylated DNA and acetylated histones at both enhancers correlated with a high level of SOX2 expression in proliferating neural progenitors and 2) reversible modifications of the SRR1 element were observed during gene reexpression in astrocytes, whereas permanent epigenetic marks on the SRR2 enhancer were seen in neurons where the gene was silenced. Taken together, these results are clear illustrations of cell‐type‐specific epigenomes and suggest mechanisms by which they may be created and maintained.Keywords
This publication has 55 references indexed in Scilit:
- Genomic DNA methylation: the mark and its mediatorsTrends in Biochemical Sciences, 2006
- Agonistic and Antagonistic Action of AP2, Msx2, Pax6, Prox1 and Six3 in the Regulation of Sox2 ExpressionOphthalmic Research, 2005
- S/MAR-binding properties of Sox2 and its involvement in apoptosis of human NT2 neural precursorsCell Death & Differentiation, 2005
- Effects of glutathione depletion on the viability of human NT2-derived neuronal and astroglial culturesNeuron Glia Biology, 2004
- Vertebrate neurogenesis is counteracted by Sox1–3 activityNature Neuroscience, 2003
- The UCSC Genome Browser DatabaseNucleic Acids Research, 2003
- Identification of Sox-2 regulatory region which is under the control of Oct-3/4-Sox-2 complexNucleic Acids Research, 2002
- The Human Genome Browser at UCSCGenome Research, 2002
- DNA methylation patterns and epigenetic memoryGenes & Development, 2002
- Astrogliosis in culture. IV. Effects of basic fibroblast growth factorJournal of Neuroscience Research, 1995