Ecological success in freshwater lakes: insights from novel cultivated lineages of the abundant Nanopelagicales order
Authors:
- Maria-Cecilia ChiriacMCMaria-Cecilia Chiriac
- Paul LayounPLPaul Layoun
- Clafy FernandesCFClafy Fernandes
- Tiberiu Szőke-NagyTSTiberiu Szőke-Nagy
- Vojtech KasalickyVKVojtech Kasalicky
- Yusuke OkazakiYOYusuke Okazaki
- Jason N. WoodhouseJWJason N. Woodhouse
- Hans-Peter GrossartHGHans-Peter Grossart
- Kasia PiwoszKasia Piwosz
- Petr ZnachorPZPetr Znachor
- Bettina SonntagBettina Sonntag
- Cristiana CallieriCCCristiana Callieri
Open Access
- 12 December 2025
- journal article
- research article
- Published by Springer Nature in Microbiome
- Vol. 14 (1)
Abstract
The order Nanopelagicales is the most abundant bacterioplankton lineage in freshwater lakes and exhibits typical streamlined genomic characteristiKeywords
Funding Information
- Grantová Agentura České Republiky (24-12912M)
- Grantová Agentura České Republiky (22-03662S)
- Grantová Agentura České Republiky (22-33245S)
- Grantová Agentura České Republiky (20-12496X)
- Grantová Agentura České Republiky (21-21990S)
- Grant Agency of the University of South Bohemia (022/2019/P)
- Grant Agency of the University of South Bohemia (017/2022/P)
- JST FOREST (JPMJFR2273)
- Japan Society for the Promotion of Science (25K18161)
- Leibniz-Institut für Gewässerökologie und Binnenfischerei (GR1540/37-1)
- European Regional Development Fund – the Operational Programme Competitiveness (KK.01.1.1.01.0003)
- Croatian Science Foundation (HRZZ IP-2020–02–9021)
- Ministerul Cercetării şi Inovării (760010/30.12.2022)
This publication has 124 references indexed in Scilit:
- High-throughput cultivation based on dilution-to-extinction with catalase supplementation and a case study of cultivating acI bacteria from Lake SoyangJournal of Microbiology, 2020
- Using SPAdes De Novo AssemblerCurrent Protocols in Bioinformatics, 2020
- BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome SequencesJournal of Molecular Biology, 2016
- Crystal structure and characterization of a novel l-serine ammonia-lyase from Rhizomucor mieheiBiochemical and Biophysical Research Communications, 2015
- Reductive activation of E. coli respiratory nitrate reductaseBiochimica et Biophysica Acta (BBA) - Bioenergetics, 2015
- Phylogeny-aware alignment with PRANK2013
- Glutathione transportersBiochimica et Biophysica Acta (BBA) - General Subjects, 2013
- Identification of genes encoding microbial glucuronoyl esterasesFEBS Letters, 2007
- Global metabolic response of Escherichia coli to gnd or zwf gene-knockout, based on 13 C-labeling experiments and the measurement of enzyme activitiesApplied Microbiology and Biotechnology, 2003
- Oligotrophy1981