Timo T. Nieminen
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Research Interests
Timo T. Nieminen has a total of 24 co-authors. Here are the top co-authors by number of shared publications:
- Johanna Björkroth
Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland
5 shared publications - Elina Säde
Department of Food Hygiene and Environmental Health, University of Helsinki, Helsinki, Finland
3 shared publications A. Paloranta
Univ Helsinki, Dept Food Hyg & Environm Hlth, FIN-00014 Helsinki, Finland
2 shared publications- Kaisa Koskinen
DNA Sequencing and Genomics Laboratory, Institute of Biotechnology, University of Helsinki, Helsinki, Finland
2 shared publications L. Paulin
Univ Helsinki, Inst Biotechnol, DNA Sequencing & Genom Lab, FIN-00014 Helsinki, Finland
2 shared publicationsP. Auvinen
Univ Helsinki, Inst Biotechnol, DNA Sequencing & Genom Lab, FIN-00014 Helsinki, Finland
2 shared publications
Latest Publications
- 1 February 2016
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 218, 86-95
Volatile organic compounds and Photobacterium phosphoreum associated with spoilage of modified-atmosphere-packaged raw pork
- 1 February 2016
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 218, 86-95
Volatile organic compounds and Photobacterium phosphoreum associated with spoilage of modified-atmosphere-packaged raw pork
- 8 September 2015
- Published by Oxford University Press (OUP) in Journal of Applied Microbiology
- Vol. 119 (5) , 1310-1316
Packaging gas selects lactic acid bacterial communities on raw pork
To study the effect of different CO2-rich packaging atmospheres on the composition of lactic acid bacterial communities proliferating on raw pork. Raw pork loin was inoculated with a mixture of 14 lactic acid bacteria (LAB) strains previously associated with meat and packaged with four gas atmospheres: (i) 100% CO2 (ii) 80% N2 20% CO2 (iii) 80% N2, 20% CO2, 0·4% CO and (iv) 80% O2, 20% CO2. The colony counts of LAB, pH and composition of packaging gas were monitored every other day during the storage of 14 days at +6°C. The compositions of lactic acid bacterial communities on pork were evaluated after 7 days of storage with culture-independent, terminal restriction fragment length polymorphism analysis of 16S rRNA gene fragments. After 14 days of storage, the compositions of lactic acid bacterial communities were evaluated using identification of plate-grown LAB isolates by numerical ribopattern analysis. The results showed that (i) high concentration of CO2 in packaging atmosphere favoured Lactobacillus sp. (ii) high concentration of O2 favoured Leuconostoc spp. (iii) atmosphere with 80% N2, 20% CO2 favoured Lactococcus sp. The composition of modified packaging atmosphere is a major factor selecting lactic acid bacterial communities proliferating on raw meat. The study provides an explanation for the compositions of lactic bacterial communities on modified atmosphere packaged raw meat observed in other studies. The results should be considered when attempting to manipulate LAB communities in raw meat, e.g. by protective cultures.
- 8 September 2015
- Published by Oxford University Press (OUP) in Journal of Applied Microbiology
- Vol. 119 (5) , 1310-1316
Packaging gas selects lactic acid bacterial communities on raw pork
To study the effect of different CO2-rich packaging atmospheres on the composition of lactic acid bacterial communities proliferating on raw pork. Raw pork loin was inoculated with a mixture of 14 lactic acid bacteria (LAB) strains previously associated with meat and packaged with four gas atmospheres: (i) 100% CO2 (ii) 80% N2 20% CO2 (iii) 80% N2, 20% CO2, 0·4% CO and (iv) 80% O2, 20% CO2. The colony counts of LAB, pH and composition of packaging gas were monitored every other day during the storage of 14 days at +6°C. The compositions of lactic acid bacterial communities on pork were evaluated after 7 days of storage with culture-independent, terminal restriction fragment length polymorphism analysis of 16S rRNA gene fragments. After 14 days of storage, the compositions of lactic acid bacterial communities were evaluated using identification of plate-grown LAB isolates by numerical ribopattern analysis. The results showed that (i) high concentration of CO2 in packaging atmosphere favoured Lactobacillus sp. (ii) high concentration of O2 favoured Leuconostoc spp. (iii) atmosphere with 80% N2, 20% CO2 favoured Lactococcus sp. The composition of modified packaging atmosphere is a major factor selecting lactic acid bacterial communities proliferating on raw meat. The study provides an explanation for the compositions of lactic bacterial communities on modified atmosphere packaged raw meat observed in other studies. The results should be considered when attempting to manipulate LAB communities in raw meat, e.g. by protective cultures.
- Open Access
- 22 March 2013
- Published by Springer Nature in Acta Veterinaria Scandinavica
- Vol. 55 (1) , 26
Quantification of Mycobacterium avium subspecies in pig tissues by real-time quantitative PCR
Mycobacterioses in animals cause economical losses and certain Mycobacterium avium subspecies are regarded as potential zoonotic agents. The evaluation of the zoonotic risk caused by M. avium subspecies requires information about the quantities of Mycobacterium strains in infected animals. Because M. avium subspecies in pig tissues are difficult or even impossible to quantify by culturing, we tested the suitability of a culture-independent real-time quantitative PCR (qPCR) assay for this purpose.
- 22 March 2013
- Published by Springer Nature in Acta Veterinaria Scandinavica
- Vol. 55 (1) , 26
Open AccessQuantification of Mycobacterium avium subspecies in pig tissues by real-time quantitative PCR
Mycobacterioses in animals cause economical losses and certain Mycobacterium avium subspecies are regarded as potential zoonotic agents. The evaluation of the zoonotic risk caused by M. avium subspecies requires information about the quantities of Mycobacterium strains in infected animals. Because M. avium subspecies in pig tissues are difficult or even impossible to quantify by culturing, we tested the suitability of a culture-independent real-time quantitative PCR (qPCR) assay for this purpose.
- 1 July 2012
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 157 (2) , 142-149
Comparison of microbial communities in marinated and unmarinated broiler meat by metagenomics
- 1 July 2012
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 157 (2) , 142-149
Comparison of microbial communities in marinated and unmarinated broiler meat by metagenomics
- Open Access
- 1 January 2012
- Published by Frontiers Media SA in Frontiers in Microbiology
- Vol. 3
The effect of marination on lactic acid bacteria communities in raw broiler fillet strips
Marination with marinade containing salt, sugar, and acetic acid is commonly used in Finland to enhance the value of raw broiler meat. In this study, we investigated the effect of marination, marinade components and storage time on composition of bacterial communities in modified atmosphere-packaged (MAP) broiler fillet strips. The communities were characterized using two culture-independent methods: 16S rRNA gene fragment sequencing and terminal restriction fragment length polymorphism. In unmarinated broiler fillet strips, Lactococcus spp. and Carnobacterium spp. predominated at the early storage phase but were partially replaced by Lactobacillus spp. and Leuconostoc spp. when the chilled storage time was extended. In the marinated fillet strips, Lactobacillus spp. and Leuconostoc spp. predominated independent from the storage time. By mixing the different marinade components with broiler meat, we showed that marination changed the community composition and favored Leuconostoc spp. and Lactobacillus spp. by the combined effect of carbohydrates and acetic acid in marinade. Marination increased the maximum level of lactic acid bacteria in broiler meat and enhanced CO2 production and acidification of meat during the chilled storage. Accumulation of CO2 in package head-space due to the enhanced growth of Leuconostoc spp. in marinated meat may lead to bulging of packages, which is a spoilage defect frequently associated with marinated and MAP raw broiler preparations in Finland.
- 1 January 2012
- Published by Frontiers Media SA in Frontiers in Microbiology
- Vol. 3
Open AccessThe effect of marination on lactic acid bacteria communities in raw broiler fillet strips
Marination with marinade containing salt, sugar, and acetic acid is commonly used in Finland to enhance the value of raw broiler meat. In this study, we investigated the effect of marination, marinade components and storage time on composition of bacterial communities in modified atmosphere-packaged (MAP) broiler fillet strips. The communities were characterized using two culture-independent methods: 16S rRNA gene fragment sequencing and terminal restriction fragment length polymorphism. In unmarinated broiler fillet strips, Lactococcus spp. and Carnobacterium spp. predominated at the early storage phase but were partially replaced by Lactobacillus spp. and Leuconostoc spp. when the chilled storage time was extended. In the marinated fillet strips, Lactobacillus spp. and Leuconostoc spp. predominated independent from the storage time. By mixing the different marinade components with broiler meat, we showed that marination changed the community composition and favored Leuconostoc spp. and Lactobacillus spp. by the combined effect of carbohydrates and acetic acid in marinade. Marination increased the maximum level of lactic acid bacteria in broiler meat and enhanced CO2 production and acidification of meat during the chilled storage. Accumulation of CO2 in package head-space due to the enhanced growth of Leuconostoc spp. in marinated meat may lead to bulging of packages, which is a spoilage defect frequently associated with marinated and MAP raw broiler preparations in Finland.
- 1 January 2011
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 144 (3) , 360-366
Characterization of psychrotrophic bacterial communities in modified atmosphere-packed meat with terminal restriction fragment length polymorphism
- 1 January 2011
- Published by Elsevier in International Journal of Food Microbiology
- Vol. 144 (3) , 360-366
Characterization of psychrotrophic bacterial communities in modified atmosphere-packed meat with terminal restriction fragment length polymorphism