Tobias Ekholm
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Tobias Ekholm has a total of 21 co-authors. Here are the top co-authors by number of shared publications:
- Pietro Longhi
Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
11 shared publications - Ivan Smith
University of Cambridge
6 shared publications - Piotr Kucharski
Institute of Mathematics, University of Warsaw, Warsaw, Poland
6 shared publications - Vivek Shende
Center for Quantum Mathematics, Syddansk Univ., Campusvej 55 5230 Odense, Denmark
6 shared publications - Sunghyuk Park
Department of Mathematics, Harvard University, Cambridge, USA
3 shared publications - Angus Gruen
Division of Physics, Mathematics and Astronomy California Institute of Technology 1200 E. California Blvd. 91125 Pasadena CA USA
2 shared publications
Latest Publications
- Open Access
- 28 October 2026
- Published by Springer Nature in Communications in Mathematical Physics
- Vol. 407 (12) , 258
The Worldsheet Skein D-module and Basic Curves on Lagrangian Fillings of the Hopf Link Conormal
HOMFLYPT polynomials of knots in the 3-sphere in symmetric representations satisfy recursion relations. Their geometric origin is holomorphic curves at infinity on knot conormals that determine a D -module with characteristic variety the Legendrian knot conormal augmention variety and with the recursion relations as operator polynomial generators [1, 2]. We consider skein lifts of recursions and D -modules corresponding to skein valued open curve counts [3] that encode HOMFLYPT polynomials colored by arbitrary partitions. We define a worldsheet skein module which is the universal target for skein curve counts and a corresponding D -module. We then consider the concrete example of the Legendrian conormal of the Hopf link. We show that the worldsheet skein D -module for the Hopf link conormal is generated by three operator polynomials that annihilate the skein valued partition function for any choice of Lagrangian filling and recursively determine it uniquely. We find Lagrangian fillings for any point in the augmentation variety and show that their skein valued partition functions admit quiver-like expansions where all holomorphic curves are generated by a small number of basic holomorphic disks and annuli and their multiple covers.
- 28 October 2026
- Published by Springer Nature in Communications in Mathematical Physics
- Vol. 407 (12) , 258
Open AccessThe Worldsheet Skein D-module and Basic Curves on Lagrangian Fillings of the Hopf Link Conormal
HOMFLYPT polynomials of knots in the 3-sphere in symmetric representations satisfy recursion relations. Their geometric origin is holomorphic curves at infinity on knot conormals that determine a D -module with characteristic variety the Legendrian knot conormal augmention variety and with the recursion relations as operator polynomial generators [1, 2]. We consider skein lifts of recursions and D -modules corresponding to skein valued open curve counts [3] that encode HOMFLYPT polynomials colored by arbitrary partitions. We define a worldsheet skein module which is the universal target for skein curve counts and a corresponding D -module. We then consider the concrete example of the Legendrian conormal of the Hopf link. We show that the worldsheet skein D -module for the Hopf link conormal is generated by three operator polynomials that annihilate the skein valued partition function for any choice of Lagrangian filling and recursively determine it uniquely. We find Lagrangian fillings for any point in the augmentation variety and show that their skein valued partition functions admit quiver-like expansions where all holomorphic curves are generated by a small number of basic holomorphic disks and annuli and their multiple covers.
- 23 September 2026
- Published by MathDoc/Centre Mersenne in Publications mathématiques de l'IHÉS
- p. 1-62
Skeins on branes
We study 1-parameter families of holomorphic curves with Lagrangian boundary in Calabi–Yau 3-folds. We show that the expected codimension one phenomena can be organized to match the HOMFLYPT skein relations from quantum topology. It follows that counting holomorphic curves by the class of their boundaries in the skein module of the Lagrangian gives a deformation invariant result. This is a mathematically rigorous incarnation of Witten’s assertion that boundaries of open topological strings create line defects in Chern–Simons theory [42]. Using this theory, we rigorously establish the following prediction of Ooguri and Vafa: the coefficients of the HOMFLYPT polynomial of a link in the three-sphere count the holomorphic curves in the resolved conifold, with boundary on (a push-off of) the link conormal.
- 23 September 2026
- Published by MathDoc/Centre Mersenne in Publications mathématiques de l'IHÉS
- p. 1-62
Skeins on branes
We study 1-parameter families of holomorphic curves with Lagrangian boundary in Calabi–Yau 3-folds. We show that the expected codimension one phenomena can be organized to match the HOMFLYPT skein relations from quantum topology. It follows that counting holomorphic curves by the class of their boundaries in the skein module of the Lagrangian gives a deformation invariant result. This is a mathematically rigorous incarnation of Witten’s assertion that boundaries of open topological strings create line defects in Chern–Simons theory [42]. Using this theory, we rigorously establish the following prediction of Ooguri and Vafa: the coefficients of the HOMFLYPT polynomial of a link in the three-sphere count the holomorphic curves in the resolved conifold, with boundary on (a push-off of) the link conormal.
- Open Access
Open strings on knot complements
Using skein valued holomorphic curve counting techniques, we give a flow loop formula for the skein valued partition function of the Lagrangian knot complement of a fibered knot (of the $A$-model open topological strings with Lagrangian $A$-branes wrapping the complement) in the cotangent bundle of the three-sphere and in the resolved conifold. For torus knots we show that the partition function in the cotangent bundle localizes on two or three holomorphic annuli and give a corresponding generalized quiver structure for the partition function in the resolved conifold. We connect the formula to the augmentation curve, the representation variety of the knot contact homology algebra of the knot, generated by Reeb chords of its Legendrian conormal and with differential given by holomorphic disks interpolating between words of Reeb chords. The curve admits a quantization as a $q$-difference equation for the generating function of symmetrically colored HOMFLYPT-polynomials of the knot or, geometrically, for the $U(1)$-partition function of the knot conormal. For $(2,2p+1)$-torus knots we show that, after a change of variables, the partition function of the knot complement also satisfies this $q$-difference equation. This gives another geometrically defined coordinate chart for the $D$-module defined by the quantized augmentation polynomial.
Open AccessOpen strings on knot complements
Using skein valued holomorphic curve counting techniques, we give a flow loop formula for the skein valued partition function of the Lagrangian knot complement of a fibered knot (of the $A$-model open topological strings with Lagrangian $A$-branes wrapping the complement) in the cotangent bundle of the three-sphere and in the resolved conifold. For torus knots we show that the partition function in the cotangent bundle localizes on two or three holomorphic annuli and give a corresponding generalized quiver structure for the partition function in the resolved conifold. We connect the formula to the augmentation curve, the representation variety of the knot contact homology algebra of the knot, generated by Reeb chords of its Legendrian conormal and with differential given by holomorphic disks interpolating between words of Reeb chords. The curve admits a quantization as a $q$-difference equation for the generating function of symmetrically colored HOMFLYPT-polynomials of the knot or, geometrically, for the $U(1)$-partition function of the knot conormal. For $(2,2p+1)$-torus knots we show that, after a change of variables, the partition function of the knot complement also satisfies this $q$-difference equation. This gives another geometrically defined coordinate chart for the $D$-module defined by the quantized augmentation polynomial.
- Open Access
- 12 December 2025
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 122 (50)
Colored HOMFLYPT counts holomorphic curves
Given a link in the three-sphere, its Lagrangian conormal can be transplanted to the “resolved conifold,” which is a certain noncompact Calabi–Yau threefold. Here we show that, as predicted by Ooguri and Vafa using string theoretic arguments, the count of all holomorphic curves in the resolved conifold ending on this Lagrangian is, appropriately understood, the collection of the HOMFLYPT invariants of all colorings of the link. This generalizes our previous work, Skeins on branes, arXiv:1901.08027, which identified a curve count that captures the uncolored case. The main ingredient in the present work is a skein-valued multiple cover formula for an isolated embedded annulus.
- 12 December 2025
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 122 (50)
Open AccessColored HOMFLYPT counts holomorphic curves
Given a link in the three-sphere, its Lagrangian conormal can be transplanted to the “resolved conifold,” which is a certain noncompact Calabi–Yau threefold. Here we show that, as predicted by Ooguri and Vafa using string theoretic arguments, the count of all holomorphic curves in the resolved conifold ending on this Lagrangian is, appropriately understood, the collection of the HOMFLYPT invariants of all colorings of the link. This generalizes our previous work, Skeins on branes, arXiv:1901.08027, which identified a curve count that captures the uncolored case. The main ingredient in the present work is a skein-valued multiple cover formula for an isolated embedded annulus.
- Open Access
Skein traces from curve counting
Given a 3-manifold $M$, and a branched cover arising from the projection of a Lagrangian 3-manifold $L$ in the cotangent bundle of $M$ to the zero-section, we define a map from the skein of $M$ to the skein of $L$, via the skein-valued counting of holomorphic curves. When $M$ and $L$ are products of surfaces and intervals, we show that wall crossings in the space of the branched covers obey a skein-valued lift of the Kontsevich-Soibelman wall-crossing formula. Holomorphic curves in cotangent bundles correspond to Morse flow graphs; in the case of branched double covers, this allows us to give an explicit formula for the the skein trace. After specializing to the case where $M$ is a surface times an interval, and additionally specializing the HOMFLYPT skein to the $\mathfrak{gl}(2)$ skein on $M$ and the $\mathfrak{gl}(1)$ skein on $L$, we recover an existing prescription of Neitzke and Yan.Open AccessSkein traces from curve counting
Given a 3-manifold $M$, and a branched cover arising from the projection of a Lagrangian 3-manifold $L$ in the cotangent bundle of $M$ to the zero-section, we define a map from the skein of $M$ to the skein of $L$, via the skein-valued counting of holomorphic curves. When $M$ and $L$ are products of surfaces and intervals, we show that wall crossings in the space of the branched covers obey a skein-valued lift of the Kontsevich-Soibelman wall-crossing formula. Holomorphic curves in cotangent bundles correspond to Morse flow graphs; in the case of branched double covers, this allows us to give an explicit formula for the the skein trace. After specializing to the case where $M$ is a surface times an interval, and additionally specializing the HOMFLYPT skein to the $\mathfrak{gl}(2)$ skein on $M$ and the $\mathfrak{gl}(1)$ skein on $L$, we recover an existing prescription of Neitzke and Yan. - Open Access
The skein valued mirror of the topological vertex
We count holomorphic curves in complex 3-space with boundaries on three special Lagrangian solid tori. The count is valued in the HOMFLYPT skein module of the union of the tori. Using 1-parameter families of curves at infinity, we derive three skein valued operator equations which must annihilate the count, and which dequantize to a mirror of the geometry. We show algebraically that the resulting equations determine the count uniquely, and that the result agrees with the topological vertex from topological string theory.
Open AccessThe skein valued mirror of the topological vertex
We count holomorphic curves in complex 3-space with boundaries on three special Lagrangian solid tori. The count is valued in the HOMFLYPT skein module of the union of the tori. Using 1-parameter families of curves at infinity, we derive three skein valued operator equations which must annihilate the count, and which dequantize to a mirror of the geometry. We show algebraically that the resulting equations determine the count uniquely, and that the result agrees with the topological vertex from topological string theory.
- Open Access
Legendrian surgery
This is an overview paper that describes Eliashberg's Legendrian surgery approach to wrapped Floer cohomology and use it to derive the basic relations between various holomorphic curve theories with additional algebraic constructions. We also give a brief discussion of further results that use the surgery perspective, e.g., for holomorphic curve invariants of singular Legendrians and Lagrangians.
Open AccessLegendrian surgery
This is an overview paper that describes Eliashberg's Legendrian surgery approach to wrapped Floer cohomology and use it to derive the basic relations between various holomorphic curve theories with additional algebraic constructions. We also give a brief discussion of further results that use the surgery perspective, e.g., for holomorphic curve invariants of singular Legendrians and Lagrangians.
- Open Access
The worldsheet skein D-module and basic curves on Lagrangian fillings of the Hopf link conormal
HOMFLYPT polynomials of knots in the 3-sphere in symmetric representations satisfy recursion relations. Their geometric origin is holomorphic curves at infinity on knot conormals that determine a $D$-module with characteristic variety the Legendrian knot conormal augmention variety and with the recursion relations as operator polynomial generators [arXiv:1304.5778, arXiv:1803.04011]. We consider skein lifts of recursions and $D$-modules corresponding to skein valued open curve counts [arXiv:1901.08027] that encode HOMFLYPT polynomials colored by arbitrary partitions. We define a worldsheet skein module which is the universal target for skein curve counts and a corresponding $D$-module. We then consider the concrete example of the Legendrian conormal of the Hopf link. We show that the worldsheet skein $D$-module for the Hopf link conormal is generated by three operator polynomials that annihilate the skein valued partition function for any choice of Lagrangian filling and recursively determine it uniquely. We find Lagrangian fillings for any point in the augmentation variety and show that their skein valued partition functions admit quiver-like expansions where all holomorphic curves are generated by a small number of basic holomorphic disks and annuli and their multiple covers.
Open AccessThe worldsheet skein D-module and basic curves on Lagrangian fillings of the Hopf link conormal
HOMFLYPT polynomials of knots in the 3-sphere in symmetric representations satisfy recursion relations. Their geometric origin is holomorphic curves at infinity on knot conormals that determine a $D$-module with characteristic variety the Legendrian knot conormal augmention variety and with the recursion relations as operator polynomial generators [arXiv:1304.5778, arXiv:1803.04011]. We consider skein lifts of recursions and $D$-modules corresponding to skein valued open curve counts [arXiv:1901.08027] that encode HOMFLYPT polynomials colored by arbitrary partitions. We define a worldsheet skein module which is the universal target for skein curve counts and a corresponding $D$-module. We then consider the concrete example of the Legendrian conormal of the Hopf link. We show that the worldsheet skein $D$-module for the Hopf link conormal is generated by three operator polynomials that annihilate the skein valued partition function for any choice of Lagrangian filling and recursively determine it uniquely. We find Lagrangian fillings for any point in the augmentation variety and show that their skein valued partition functions admit quiver-like expansions where all holomorphic curves are generated by a small number of basic holomorphic disks and annuli and their multiple covers.
- Open Access
- 13 November 2023
- Published by Springer Nature in Letters in Mathematical Physics
- Vol. 113 (6) , 1-76
Knot homologies and generalized quiver partition functions
We introduce generalized quiver partition functions of a knot K and conjecture a relation to generating functions of symmetrically colored HOMFLY-PT polynomials and corresponding HOMFLY-PT homology Poincaré polynomials. We interpret quiver nodes as certain basic holomorphic disks in the resolved conifold, with boundary on the knot conormal $$L_K$$ , a positive multiple of a unique closed geodesic, and with their (infinitesimal) boundary linking density measured by the adjacency matrix of the generalized quiver. The basic holomorphic disks that are quiver nodes appear in a certain U(1)-symmetric configuration. We propose an extension of the quiver partition function to arbitrary, not U(1)-symmetric, configurations as a function with values in chain complexes. The chain complex differential is trivial at the U(1)-symmetric configuration, under deformations the complex changes, but its homology remains invariant. We also study recursion relations for the partition functions connected to knot homologies. We show that, after a suitable change of variables, any (generalized) quiver partition function satisfies the recursion relation of a single toric brane in $${\mathbb {C}}^3$$ .- 13 November 2023
- Published by Springer Nature in Letters in Mathematical Physics
- Vol. 113 (6) , 1-76
Open AccessKnot homologies and generalized quiver partition functions
We introduce generalized quiver partition functions of a knot K and conjecture a relation to generating functions of symmetrically colored HOMFLY-PT polynomials and corresponding HOMFLY-PT homology Poincaré polynomials. We interpret quiver nodes as certain basic holomorphic disks in the resolved conifold, with boundary on the knot conormal $$L_K$$ , a positive multiple of a unique closed geodesic, and with their (infinitesimal) boundary linking density measured by the adjacency matrix of the generalized quiver. The basic holomorphic disks that are quiver nodes appear in a certain U(1)-symmetric configuration. We propose an extension of the quiver partition function to arbitrary, not U(1)-symmetric, configurations as a function with values in chain complexes. The chain complex differential is trivial at the U(1)-symmetric configuration, under deformations the complex changes, but its homology remains invariant. We also study recursion relations for the partition functions connected to knot homologies. We show that, after a suitable change of variables, any (generalized) quiver partition function satisfies the recursion relation of a single toric brane in $${\mathbb {C}}^3$$ . - Top Cited PapersOpen Access
- 25 August 2023
- Published by Mathematical Sciences Publishers in Geometry & Topology
- Vol. 27 (6) , 2049-2179
Duality between Lagrangian and Legendrian invariants
- 25 August 2023
- Published by Mathematical Sciences Publishers in Geometry & Topology
- Vol. 27 (6) , 2049-2179
Top Cited PapersOpen AccessDuality between Lagrangian and Legendrian invariants