Mohammad Arafat Hussain
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Mohammad Arafat Hussain has a total of 100 co-authors. Here are the top co-authors by number of shared publications:
Ghassan Hamarneh
School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
7 shared publications- Yangming Ou
Boston Children’s Hospital, Boston, USA
6 shared publications Rafeef Abugharbieh
University of British Columbia
5 shared publicationsSoo Yeol Lee
Department of Biomedical Engineering, Kyung Hee University, 1 Seochun, Yongin-si, Gyeonggi-do 446-701, Republic of Korea
4 shared publications- Towhidul Islam
Department of Computer Science and Engineering, Northern University Bangladesh, Dhaka, Bangladesh
4 shared publications - Abdulla Al Shihab
Department of Electrical and Telecommunication Engineering, Daffodil International University, Dhaka, Bangladesh
3 shared publications
Latest Publications
- Open Access
- 6 February 2026
- Published by Springer Nature in Communications Medicine
- Vol. 6 (1)
Machine learning to infer neurocognitive testing scores among adolescents and young adults with congenital heart disease
Background Congenital heart disease (CHD) affects about 1% of births and is linked to differences in thinking and learning. Understanding how birth, genetic, clinical, and environmental factors together explain cognitive variability can inform monitoring and care. This study builds a multivariate model predicting cognition across multiple domains in adolescents and young adults with CHD. Methods We studied 89 adolescents and young adults (AYAs; mean age 16 years) with CHD who completed structural and diffusion MRI and fifteen neurocognitive tests across seven domains. Using an enhanced forward-inclusion and backward-elimination strategy with cross-validation, we built multivariate models incorporating biological, socioeconomic, clinical, genetic, and brain imaging features. Performance was evaluated using Pearson correlation (\(r\)) between observed and inferred scores, mean absolute error (MAE), and inverse inferability score (IIS). Results Here we show that models infer scores with moderate accuracy (\(r\) = 0.245–0.648; MAE = 1.6–12.0 points; mean MAE = 6.3). Highest correlations include Digit Span (\(r\) = 0.65; p < 0.001), Verbal Comprehension Index (\(r\) = 0.594; p < 0.001), and Matrix Reasoning (\(r\) = 0.574; p < 0.001). Domain ranking by IIS shows the best (lowest) scores for general intelligence (0.0886), followed by working memory (0.7100), and a higher (worse) score for perceptual reasoning (1.9199). Conclusions A multivariate approach combining brain imaging with genetic, clinical, and environmental factors provides clinically meaningful inference of individual cognitive performance in AYAs with CHD. These findings suggest complementary roles of brain, genetic, and contextual factors in shaping cognitive variability and motivate validation in larger cohorts.- 6 February 2026
- Published by Springer Nature in Communications Medicine
- Vol. 6 (1)
Open AccessMachine learning to infer neurocognitive testing scores among adolescents and young adults with congenital heart disease
Background Congenital heart disease (CHD) affects about 1% of births and is linked to differences in thinking and learning. Understanding how birth, genetic, clinical, and environmental factors together explain cognitive variability can inform monitoring and care. This study builds a multivariate model predicting cognition across multiple domains in adolescents and young adults with CHD. Methods We studied 89 adolescents and young adults (AYAs; mean age 16 years) with CHD who completed structural and diffusion MRI and fifteen neurocognitive tests across seven domains. Using an enhanced forward-inclusion and backward-elimination strategy with cross-validation, we built multivariate models incorporating biological, socioeconomic, clinical, genetic, and brain imaging features. Performance was evaluated using Pearson correlation (\(r\)) between observed and inferred scores, mean absolute error (MAE), and inverse inferability score (IIS). Results Here we show that models infer scores with moderate accuracy (\(r\) = 0.245–0.648; MAE = 1.6–12.0 points; mean MAE = 6.3). Highest correlations include Digit Span (\(r\) = 0.65; p < 0.001), Verbal Comprehension Index (\(r\) = 0.594; p < 0.001), and Matrix Reasoning (\(r\) = 0.574; p < 0.001). Domain ranking by IIS shows the best (lowest) scores for general intelligence (0.0886), followed by working memory (0.7100), and a higher (worse) score for perceptual reasoning (1.9199). Conclusions A multivariate approach combining brain imaging with genetic, clinical, and environmental factors provides clinically meaningful inference of individual cognitive performance in AYAs with CHD. These findings suggest complementary roles of brain, genetic, and contextual factors in shaping cognitive variability and motivate validation in larger cohorts. - Open Access
- 6 June 2025
- Published by Springer Nature in Research Square
Machine Learning to Infer Neurocognitive Testing Scores Among Adolescents and Young Adults with Congenital Heart Disease
Congenital heart disease (CHD) affects approximately 1% of newborns and is associated with an increased risk for neurodevelopmental impairments. Identification and characterization of the factors affecting neurocognitive outcomes in adolescents and young adults (AYAs) with CHD remains an important area of research. We have integrated demographic, parental, socioeconomic, genetic, and brain magnetic resonance imaging (MRI) features into multivariate machine learning to infer neuropsychological testing scores with an enhanced forward inclusion backward elimination (FIBE) technique. Across 89 participants (aged 7–30 years), we included 15 neurocognitive assessments in 7 domains, achieving Pearson’s correlations 𝑟 = 0.25−0.65 between actual and inferred scores. General intelligence, working memory, and processing speed were most inferable, with various MRI features, the loss-of-functon(LoF) genetic variants in genes associated with neurodevelopmental disorders or that function as chromatin modifiers, sex, and father’s education level as key joint covariates. In contrast, oral language and perceptual organization were the least inferable. These findings highlight the combinatorial effects of genetic and environmental factors on the individual variability in neurocognitive functions among AYAs with CHD. Given the small sample size and data heterogeneity, further investigation in large cohorts is needed.
- 6 June 2025
- Published by Springer Nature in Research Square
Open AccessMachine Learning to Infer Neurocognitive Testing Scores Among Adolescents and Young Adults with Congenital Heart Disease
Congenital heart disease (CHD) affects approximately 1% of newborns and is associated with an increased risk for neurodevelopmental impairments. Identification and characterization of the factors affecting neurocognitive outcomes in adolescents and young adults (AYAs) with CHD remains an important area of research. We have integrated demographic, parental, socioeconomic, genetic, and brain magnetic resonance imaging (MRI) features into multivariate machine learning to infer neuropsychological testing scores with an enhanced forward inclusion backward elimination (FIBE) technique. Across 89 participants (aged 7–30 years), we included 15 neurocognitive assessments in 7 domains, achieving Pearson’s correlations 𝑟 = 0.25−0.65 between actual and inferred scores. General intelligence, working memory, and processing speed were most inferable, with various MRI features, the loss-of-functon(LoF) genetic variants in genes associated with neurodevelopmental disorders or that function as chromatin modifiers, sex, and father’s education level as key joint covariates. In contrast, oral language and perceptual organization were the least inferable. These findings highlight the combinatorial effects of genetic and environmental factors on the individual variability in neurocognitive functions among AYAs with CHD. Given the small sample size and data heterogeneity, further investigation in large cohorts is needed.
- 5 April 2025
- Published by Springer Nature in Multimedia Tools and Applications
- Vol. 84 (33) , 41615-41669
Ultrasound-based AI for COVID-19 detection: a comprehensive review of public and private lung ultrasound datasets and studies
- 5 April 2025
- Published by Springer Nature in Multimedia Tools and Applications
- Vol. 84 (33) , 41615-41669
Ultrasound-based AI for COVID-19 detection: a comprehensive review of public and private lung ultrasound datasets and studies
- Open Access
- 8 November 2024
- Published by MDPI AG in Preprints.org
Ultrasound-Based AI for COVID-19 Detection: A Comprehensive Review of Public and Private Lung Ultrasound Datasets and Studies
The COVID-19 pandemic has affected millions of people globally, with respiratory organs being strongly affected in individuals with comorbidities. Medical imaging-based diagnosis and prognosis have become increasingly popular in clinical settings for detecting COVID-19 lung infections. Among various medical imaging modalities, ultrasound stands out as a low-cost, mobile, and radiation-safe imaging technology. In this comprehensive review, we focus on AI-driven studies utilizing lung ultrasound (LUS) for COVID-19 detection and analysis. We provide a detailed overview of both publicly available and private LUS datasets and categorize the AI studies according to the dataset they used. Additionally, we systematically analyzed and tabulated the studies across various dimensions, including data preprocessing methods, AI models, cross-validation techniques, and evaluation metrics. In total, we reviewed 60 articles, 41 of which utilized public datasets, while the remaining employed private data. Our findings suggest that ultrasound-based AI studies for COVID-19 detection have great potential for clinical use, especially for children and pregnant women. Our review also provides a useful summary for future researchers and clinicians who may be interested in the field.
- 8 November 2024
- Published by MDPI AG in Preprints.org
Open AccessUltrasound-Based AI for COVID-19 Detection: A Comprehensive Review of Public and Private Lung Ultrasound Datasets and Studies
The COVID-19 pandemic has affected millions of people globally, with respiratory organs being strongly affected in individuals with comorbidities. Medical imaging-based diagnosis and prognosis have become increasingly popular in clinical settings for detecting COVID-19 lung infections. Among various medical imaging modalities, ultrasound stands out as a low-cost, mobile, and radiation-safe imaging technology. In this comprehensive review, we focus on AI-driven studies utilizing lung ultrasound (LUS) for COVID-19 detection and analysis. We provide a detailed overview of both publicly available and private LUS datasets and categorize the AI studies according to the dataset they used. Additionally, we systematically analyzed and tabulated the studies across various dimensions, including data preprocessing methods, AI models, cross-validation techniques, and evaluation metrics. In total, we reviewed 60 articles, 41 of which utilized public datasets, while the remaining employed private data. Our findings suggest that ultrasound-based AI studies for COVID-19 detection have great potential for clinical use, especially for children and pregnant women. Our review also provides a useful summary for future researchers and clinicians who may be interested in the field.
- Open Access
Ultrasound-Based AI for COVID-19 Detection: A Comprehensive Review of Public and Private Lung Ultrasound Datasets and Studies
The COVID-19 pandemic has affected millions of people globally, with respiratory organs being strongly affected in individuals with comorbidities. Medical imaging-based diagnosis and prognosis have become increasingly popular in clinical settings for detecting COVID-19 lung infections. Among various medical imaging modalities, ultrasound stands out as a low-cost, mobile, and radiation-safe imaging technology. In this comprehensive review, we focus on AI-driven studies utilizing lung ultrasound (LUS) for COVID-19 detection and analysis. We provide a detailed overview of both publicly available and private LUS datasets and categorize the AI studies according to the dataset they used. Additionally, we systematically analyzed and tabulated the studies across various dimensions, including data preprocessing methods, AI models, cross-validation techniques, and evaluation metrics. In total, we reviewed 60 articles, 41 of which utilized public datasets, while the remaining employed private data. Our findings suggest that ultrasound-based AI studies for COVID-19 detection have great potential for clinical use, especially for children and pregnant women. Our review also provides a useful summary for future researchers and clinicians who may be interested in the field.
Open AccessUltrasound-Based AI for COVID-19 Detection: A Comprehensive Review of Public and Private Lung Ultrasound Datasets and Studies
The COVID-19 pandemic has affected millions of people globally, with respiratory organs being strongly affected in individuals with comorbidities. Medical imaging-based diagnosis and prognosis have become increasingly popular in clinical settings for detecting COVID-19 lung infections. Among various medical imaging modalities, ultrasound stands out as a low-cost, mobile, and radiation-safe imaging technology. In this comprehensive review, we focus on AI-driven studies utilizing lung ultrasound (LUS) for COVID-19 detection and analysis. We provide a detailed overview of both publicly available and private LUS datasets and categorize the AI studies according to the dataset they used. Additionally, we systematically analyzed and tabulated the studies across various dimensions, including data preprocessing methods, AI models, cross-validation techniques, and evaluation metrics. In total, we reviewed 60 articles, 41 of which utilized public datasets, while the remaining employed private data. Our findings suggest that ultrasound-based AI studies for COVID-19 detection have great potential for clinical use, especially for children and pregnant women. Our review also provides a useful summary for future researchers and clinicians who may be interested in the field.
- 18 October 2024
- Published by Springer Nature
- p. 35-47
RCT: Relational Connectivity Transformer for Enhanced Prediction of Absolute and Residual Intelligence
- 18 October 2024
- Published by Springer Nature
- p. 35-47
RCT: Relational Connectivity Transformer for Enhanced Prediction of Absolute and Residual Intelligence
- Open Access
- 9 May 2024
- Published by IOP Publishing in Medical Engineering & Physics
- Vol. 129 (1) , 104179
Patient's airway monitoring during cardiopulmonary resuscitation using deep networks
Cardiopulmonary resuscitation (CPR) is a crucial life-saving technique commonly administered to individuals experiencing cardiac arrest. Among the important aspects of CPR is ensuring the correct airway position of the patient, which is typically monitored by human tutors or supervisors. This study aims to utilize deep transfer learning for the detection of the patient's correct and incorrect airway position during cardiopulmonary resuscitation. To address the challenge of identifying the airway position, we curated a dataset consisting of 198 recorded video sequences, each lasting 6-8 s, showcasing both correct and incorrect airway positions during mouth-to-mouth breathing and breathing with an Ambu Bag. We employed six cutting-edge deep networks, namely DarkNet19, EfficientNetB0, GoogleNet, MobileNet-v2, ResNet50, and NasnetMobile. These networks were initially pre-trained on computer vision data and subsequently fine-tuned using the CPR dataset. The validation of the fine-tuned networks in detecting the patient's correct airway position during mouth-to-mouth breathing achieved impressive results, with the best sensitivity (98.8 %), specificity (100 %), and F-measure (97.2 %). Similarly, the detection of the patient's correct airway position during breathing with an Ambu Bag exhibited excellent performance, with the best sensitivity (100 %), specificity (99.8 %), and F-measure (99.7 %).
- 9 May 2024
- Published by IOP Publishing in Medical Engineering & Physics
- Vol. 129 (1) , 104179
Open AccessPatient's airway monitoring during cardiopulmonary resuscitation using deep networks
Cardiopulmonary resuscitation (CPR) is a crucial life-saving technique commonly administered to individuals experiencing cardiac arrest. Among the important aspects of CPR is ensuring the correct airway position of the patient, which is typically monitored by human tutors or supervisors. This study aims to utilize deep transfer learning for the detection of the patient's correct and incorrect airway position during cardiopulmonary resuscitation. To address the challenge of identifying the airway position, we curated a dataset consisting of 198 recorded video sequences, each lasting 6-8 s, showcasing both correct and incorrect airway positions during mouth-to-mouth breathing and breathing with an Ambu Bag. We employed six cutting-edge deep networks, namely DarkNet19, EfficientNetB0, GoogleNet, MobileNet-v2, ResNet50, and NasnetMobile. These networks were initially pre-trained on computer vision data and subsequently fine-tuned using the CPR dataset. The validation of the fine-tuned networks in detecting the patient's correct airway position during mouth-to-mouth breathing achieved impressive results, with the best sensitivity (98.8 %), specificity (100 %), and F-measure (97.2 %). Similarly, the detection of the patient's correct airway position during breathing with an Ambu Bag exhibited excellent performance, with the best sensitivity (100 %), specificity (99.8 %), and F-measure (99.7 %).
- Open Access
- 3 March 2023
- Published by MDPI AG in Preprints.org
Inferring Neurocognition and Intelligence using Brain MRI
Brain magnetic resonance imaging (MRI) offers a unique lens to study neuroanatomic support of human neurocognition and intelligence. A core mystery is the MRI explanation of individual differences in neurocognition and intelligence. The past four decades have seen great advancement in studying this century-long mystery, but the sample size and population-level studies limit the explanation at the individual level. The recent rise of big data and artificial intelligence offers novel opportunities. Yet, data sources, harmonization, study design, and interpretation need to be carefully considered. This review aims to summarize past work, discuss rising opportunities and challenges, and facilitate further investigations on machine intelligence inferring human intelligence.
- 3 March 2023
- Published by MDPI AG in Preprints.org
Open AccessInferring Neurocognition and Intelligence using Brain MRI
Brain magnetic resonance imaging (MRI) offers a unique lens to study neuroanatomic support of human neurocognition and intelligence. A core mystery is the MRI explanation of individual differences in neurocognition and intelligence. The past four decades have seen great advancement in studying this century-long mystery, but the sample size and population-level studies limit the explanation at the individual level. The recent rise of big data and artificial intelligence offers novel opportunities. Yet, data sources, harmonization, study design, and interpretation need to be carefully considered. This review aims to summarize past work, discuss rising opportunities and challenges, and facilitate further investigations on machine intelligence inferring human intelligence.
- Open Access
Can deep learning predict human intelligence from structural brain MRI?
Can brain structure predict human intelligence? T1-weighted structural brain magnetic resonance images (sMRI) have been correlated with intelligence. Nevertheless, population-level association does not fully account for individual variability in intelligence. To address this, individual prediction studies emerge recently. However, they are mostly on predicting fluid intelligence (the ability to solve new problems). Studies are lacking to predict crystallized intelligence (the ability to accumulate knowledge) or general intelligence (fluid and crystallized intelligence combined). This study tests whether deep learning of sMRI can predict an individual subject’s verbal, comprehensive, and full-scale intelligence quotients (VIQ, PIQ, FSIQ), which reflect both fluid and crystallized intelligence. We performed a comprehensive set of 432 experiments, using different input images, six deep learning models, and two outcome settings, on 850 autistic and healthy subjects 6-64 years of age. Results show promise with statistical significance, and also open up questions inviting further future studies.
Open AccessCan deep learning predict human intelligence from structural brain MRI?
Can brain structure predict human intelligence? T1-weighted structural brain magnetic resonance images (sMRI) have been correlated with intelligence. Nevertheless, population-level association does not fully account for individual variability in intelligence. To address this, individual prediction studies emerge recently. However, they are mostly on predicting fluid intelligence (the ability to solve new problems). Studies are lacking to predict crystallized intelligence (the ability to accumulate knowledge) or general intelligence (fluid and crystallized intelligence combined). This study tests whether deep learning of sMRI can predict an individual subject’s verbal, comprehensive, and full-scale intelligence quotients (VIQ, PIQ, FSIQ), which reflect both fluid and crystallized intelligence. We performed a comprehensive set of 432 experiments, using different input images, six deep learning models, and two outcome settings, on 850 autistic and healthy subjects 6-64 years of age. Results show promise with statistical significance, and also open up questions inviting further future studies.
- Open Access
Influence of Demographic, Socio-economic, and Brain Structural Factors on Adolescent Neurocognition: A Correlation Analysis in the ABCD Initiative
The Adolescent Brain Cognitive Development (ABCD) initiative is a longitudinal study aimed at characterizing brain development from childhood through adolescence and identifying key biological and environmental factors that influence this development. The study measures neurocognitive abilities across a multidimensional array of functions, with a focus on the critical period of adolescence during which physical and socio-emotional changes occur and the structure of the cortical and white matter changes. In this study, we perform a correlation analysis to examine the linear relation of adolescent neurocognition functions with the demographic, socio-economic, and magnetic resonance imaging-based brain structural factors. The overall goal is to obtain a comprehensive understanding of how natural and nurtural factors influence adolescent neurocognition. Our results on > 10,000 adolescents show many positive and negative statistical significance interrelations of different neurocognitive functions with the demographic, socioeconomic, and brain structural factors, and also open up questions inviting further future studies.
Open AccessInfluence of Demographic, Socio-economic, and Brain Structural Factors on Adolescent Neurocognition: A Correlation Analysis in the ABCD Initiative
The Adolescent Brain Cognitive Development (ABCD) initiative is a longitudinal study aimed at characterizing brain development from childhood through adolescence and identifying key biological and environmental factors that influence this development. The study measures neurocognitive abilities across a multidimensional array of functions, with a focus on the critical period of adolescence during which physical and socio-emotional changes occur and the structure of the cortical and white matter changes. In this study, we perform a correlation analysis to examine the linear relation of adolescent neurocognition functions with the demographic, socio-economic, and magnetic resonance imaging-based brain structural factors. The overall goal is to obtain a comprehensive understanding of how natural and nurtural factors influence adolescent neurocognition. Our results on > 10,000 adolescents show many positive and negative statistical significance interrelations of different neurocognitive functions with the demographic, socioeconomic, and brain structural factors, and also open up questions inviting further future studies.