John P. Betjemann
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Research Interests
John P. Betjemann has a total of 43 co-authors. Here are the top co-authors by number of shared publications:
Daniel H. Lowenstein
Department of Neurology, University of California, San Francisco
2 shared publicationsJ. Claude Hemphill
Department of Neurology, University of California, San Francisco, San Francisco
2 shared publicationsS. Andrew Josephson
Department of Neurology, University of California, San Francisco
2 shared publicationsUrmimala Sarkar
Zuckerberg San Francisco General Hospital, Division of General Internal Medicine and Center for Vulnerable Populations, University of California, San Francisco, San Francisco
2 shared publications- Ari J. Green
Weill Institute for Neurosciences, Department of Neurology, University of California San Francisco (UCSF), San Francisco, CA, USA
1 shared publication - Ariane Soldatos
National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA
1 shared publication
Latest Publications
- Open Access
- 1 October 2020
- Published by Elsevier in Epilepsy & Behavior
- Vol. 111, 107261
Polypharmacy in patients with epilepsy: A nationally representative cross-sectional study
- 1 October 2020
- Published by Elsevier in Epilepsy & Behavior
- Vol. 111, 107261
Open AccessPolypharmacy in patients with epilepsy: A nationally representative cross-sectional study
- 1 April 2020
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 77 (4) , 526-+
We Dropped the Reflex Hammer on Hypertension 20 Years Ago—Reply
In Reply We thank Estol for his interest in our Viewpoint1 discussing the call for neurologists to accept the challenge of diagnosing and managing hypertension to prevent neurologic disease. We applaud their efforts to study hypertension within their health system, in particular the effort made to change the culture of young neurologists by educating them on the importance of measuring blood pressure. Identify all potential conflicts of interest that might be relevant to your comment. Conflicts of interest comprise financial interests, activities, and relationships within the past 3 years including but not limited to employment, affiliation, grants or funding, consultancies, honoraria or payment, speaker's bureaus, stock ownership or options, expert testimony, royalties, donation of medical equipment, or patents planned, pending, or issued. Err on the side of full disclosure. If you have no conflicts of interest, check "No potential conflicts of interest" in the box below. The information will be posted with your response. Not all submitted comments are published. Please see our commenting policy for details.
- 1 April 2020
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 77 (4) , 526-+
We Dropped the Reflex Hammer on Hypertension 20 Years Ago—Reply
In Reply We thank Estol for his interest in our Viewpoint1 discussing the call for neurologists to accept the challenge of diagnosing and managing hypertension to prevent neurologic disease. We applaud their efforts to study hypertension within their health system, in particular the effort made to change the culture of young neurologists by educating them on the importance of measuring blood pressure. Identify all potential conflicts of interest that might be relevant to your comment. Conflicts of interest comprise financial interests, activities, and relationships within the past 3 years including but not limited to employment, affiliation, grants or funding, consultancies, honoraria or payment, speaker's bureaus, stock ownership or options, expert testimony, royalties, donation of medical equipment, or patents planned, pending, or issued. Err on the side of full disclosure. If you have no conflicts of interest, check "No potential conflicts of interest" in the box below. The information will be posted with your response. Not all submitted comments are published. Please see our commenting policy for details.
- 1 November 2019
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 76 (11) , 1277-1278
Time for Neurologists to Drop the Reflex Hammer on Hypertension
This Viewpoint advocates for neurologists to address hypertension, including providing preventive care.
- 1 November 2019
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 76 (11) , 1277-1278
Time for Neurologists to Drop the Reflex Hammer on Hypertension
This Viewpoint advocates for neurologists to address hypertension, including providing preventive care.
- Open Access
- 26 March 2019
- Published by American Medical Association (AMA) in JAMA
- Vol. 321 (12) , 1216-1217
Emergency Medical Services Protocols for Generalized Convulsive Status Epilepticus
Multiple forms of status epilepticus exist (absence, focal, nonconvulsive) but generalized convulsive status epilepticus is most common and represents a neurological emergency. Two double-blind, randomized clinical trials (published 2001 and 2012) demonstrated the efficacy of benzodiazepines for the prehospital treatment of generalized convulsive status epilepticus.1,2
- 26 March 2019
- Published by American Medical Association (AMA) in JAMA
- Vol. 321 (12) , 1216-1217
Open AccessEmergency Medical Services Protocols for Generalized Convulsive Status Epilepticus
Multiple forms of status epilepticus exist (absence, focal, nonconvulsive) but generalized convulsive status epilepticus is most common and represents a neurological emergency. Two double-blind, randomized clinical trials (published 2001 and 2012) demonstrated the efficacy of benzodiazepines for the prehospital treatment of generalized convulsive status epilepticus.1,2
- Open Access
Metagenomics for chronic meningitis: clarifying interpretation and diagnosis
Importance: Identifying infectious causes of subacute and chronic meningitis can be challenging. Enhanced, unbiased diagnostic approaches are needed. Objective: To present a case series of patients with diagnostically challenging subacute and chronic meningitis in whom metagenomic next-generation sequencing (mNGS) of cerebrospinal fluid (CSF), supported by a statistical framework generated from mNGS sequencing of non-infectious patients and environmental controls, identified a pathogen. Design: Case series. Using mNGS data from the CSF of 94 non-infectious neuroinflammatory cases and 24 water and reagent controls, we developed and implemented a weighted scoring metric based on z-scores at the species and genus level for both nucleotide and protein databases to prioritize and rank mNGS results. We performed mNGS on total RNA extracted from CSF of patients with subacute or chronic meningitis and highlight seven cases representing a diverse array of pathogens. Setting: A multi-center study of mNGS pathogen discovery in patients with suspected neuroinflammatory conditions. Participants: Patients with diagnostically challenging subacute or chronic meningitis enrolled in a research study of mNGS performed on CSF. Intervention: mNGS was performed on total RNA extracted from CSF (0.25-0.5 mL). A weighted z-score was used to filter out environmental contaminants and facilitate efficient data triage and analysis. Main Outcomes: 1) Pathogens identified by mNGS and 2) ability of a statistical model to prioritize, rank, and simplify mNGS results. Results: mNGS identified parasitic worms, fungi and viruses in seven subjects: Taenia solium (n=2), Cryptococcus neoformans , human immunodeficiency virus-1, Aspergillus oryzae , Histoplasma capsulatum , and Candida dubliniensis . Evaluating mNGS data with a weighted z-score based scoring algorithm effectively separated bona fide pathogen sequences from spurious environmental sequences. Conclusions and Relevance: mNGS of CSF identified a diversity of microbial pathogens in patients with diagnostically challenging subacute or chronic meningitis, including a case of subarachnoid neurocysticercosis that defied diagnosis for one year, the first case of CNS vasculitis caused by Aspergillus oryzae , and the fourth reported case of Candida dubliniensis meningitis. Filtering metagenomic data with a scoring algorithm greatly clarified data interpretation and highlights the difficulties attributing biological significance to organisms that may be present in control samples used for metagenomic sequencing studies. Key Points: Question: How can metagenomic next-generation sequencing of cerebrospinal fluid be leveraged to aid in the diagnosis of patients with subacute or chronic meningitis? Findings: Metagenomic next-generation sequencing identified parasitic worms, fungi and viruses in a case series of seven subjects. A database of water-only and healthy patient controls enabled application of a z-score based scoring algorithm to effectively separate bona fide pathogen sequences from spurious environmental sequences. Meaning: Our scoring algorithm greatly simplified data interpretation in a series of patients with a wide range of challenging infectious causes of subacute or chronic meningitis identified by metagenomic next-generation sequencing.
Open AccessMetagenomics for chronic meningitis: clarifying interpretation and diagnosis
Importance: Identifying infectious causes of subacute and chronic meningitis can be challenging. Enhanced, unbiased diagnostic approaches are needed. Objective: To present a case series of patients with diagnostically challenging subacute and chronic meningitis in whom metagenomic next-generation sequencing (mNGS) of cerebrospinal fluid (CSF), supported by a statistical framework generated from mNGS sequencing of non-infectious patients and environmental controls, identified a pathogen. Design: Case series. Using mNGS data from the CSF of 94 non-infectious neuroinflammatory cases and 24 water and reagent controls, we developed and implemented a weighted scoring metric based on z-scores at the species and genus level for both nucleotide and protein databases to prioritize and rank mNGS results. We performed mNGS on total RNA extracted from CSF of patients with subacute or chronic meningitis and highlight seven cases representing a diverse array of pathogens. Setting: A multi-center study of mNGS pathogen discovery in patients with suspected neuroinflammatory conditions. Participants: Patients with diagnostically challenging subacute or chronic meningitis enrolled in a research study of mNGS performed on CSF. Intervention: mNGS was performed on total RNA extracted from CSF (0.25-0.5 mL). A weighted z-score was used to filter out environmental contaminants and facilitate efficient data triage and analysis. Main Outcomes: 1) Pathogens identified by mNGS and 2) ability of a statistical model to prioritize, rank, and simplify mNGS results. Results: mNGS identified parasitic worms, fungi and viruses in seven subjects: Taenia solium (n=2), Cryptococcus neoformans , human immunodeficiency virus-1, Aspergillus oryzae , Histoplasma capsulatum , and Candida dubliniensis . Evaluating mNGS data with a weighted z-score based scoring algorithm effectively separated bona fide pathogen sequences from spurious environmental sequences. Conclusions and Relevance: mNGS of CSF identified a diversity of microbial pathogens in patients with diagnostically challenging subacute or chronic meningitis, including a case of subarachnoid neurocysticercosis that defied diagnosis for one year, the first case of CNS vasculitis caused by Aspergillus oryzae , and the fourth reported case of Candida dubliniensis meningitis. Filtering metagenomic data with a scoring algorithm greatly clarified data interpretation and highlights the difficulties attributing biological significance to organisms that may be present in control samples used for metagenomic sequencing studies. Key Points: Question: How can metagenomic next-generation sequencing of cerebrospinal fluid be leveraged to aid in the diagnosis of patients with subacute or chronic meningitis? Findings: Metagenomic next-generation sequencing identified parasitic worms, fungi and viruses in a case series of seven subjects. A database of water-only and healthy patient controls enabled application of a z-score based scoring algorithm to effectively separate bona fide pathogen sequences from spurious environmental sequences. Meaning: Our scoring algorithm greatly simplified data interpretation in a series of patients with a wide range of challenging infectious causes of subacute or chronic meningitis identified by metagenomic next-generation sequencing.
- Top Cited Papers
- 1 June 2015
- Published by Elsevier in The Lancet Neurology
- Vol. 14 (6) , 615-624
Status epilepticus in adults
- 1 June 2015
- Published by Elsevier in The Lancet Neurology
- Vol. 14 (6) , 615-624
Top Cited PapersStatus epilepticus in adults
- Open Access
- 1 June 2015
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 72 (6) , 650-655
Trends in Status Epilepticus—Related Hospitalizations and Mortality
Status epilepticus represents a relatively common neurologic emergency, with an annual incidence ranging from 10 to 41 per 100 000 persons.1-5 Generalized convulsive status epilepticus is both the most serious and most common type of status epilepticus, representing 45% to 74% of cases.2,5 As many as 30% of patients ultimately diagnosed as having epilepsy will initially present with status epilepticus.2,6 While the overall case fatality associated with status epilepticus approaches 20%, an individual’s mortality risk depends largely on the underlying etiology; acute symptomatic causes (eg, ischemic stroke, intracerebral hemorrhage, acute traumatic brain injury, and hypoxic and anoxic brain injury) are associated with a higher case fatality than are more chronic etiologies (eg, alcohol abuse, preexisting epilepsy, and remote effects of stroke and trauma).4,7-11
- 1 June 2015
- Published by American Medical Association (AMA) in JAMA Neurology
- Vol. 72 (6) , 650-655
Open AccessTrends in Status Epilepticus—Related Hospitalizations and Mortality
Status epilepticus represents a relatively common neurologic emergency, with an annual incidence ranging from 10 to 41 per 100 000 persons.1-5 Generalized convulsive status epilepticus is both the most serious and most common type of status epilepticus, representing 45% to 74% of cases.2,5 As many as 30% of patients ultimately diagnosed as having epilepsy will initially present with status epilepticus.2,6 While the overall case fatality associated with status epilepticus approaches 20%, an individual’s mortality risk depends largely on the underlying etiology; acute symptomatic causes (eg, ischemic stroke, intracerebral hemorrhage, acute traumatic brain injury, and hypoxic and anoxic brain injury) are associated with a higher case fatality than are more chronic etiologies (eg, alcohol abuse, preexisting epilepsy, and remote effects of stroke and trauma).4,7-11