Laura Yesenia Solís-Ramos

Cedrela odorata L. (Meliaceae), commonly known as Spanish cedar, is a timber species of high interest for mass propagation. However, there are factors that complicate this process, such as poor natural regeneration, rapid loss of seed viability, or slow growth. In this context, examining the rhizosphere microbiota of this species may help devise strategies to improve its establishment during early development. Thus, we conducted a meta-taxonomic analysis of the bacterial and fungal communities associated with the rhizosphere of seedlings and adults of C. odorata and the surrounding bulk soil. We found that the alpha diversity of the microbiota in the rhizosphere was not significantly different between adults, seedlings, and soil samples, whereas the beta diversity showed significant differences between soil and rhizosphere and between developmental stages. We identified several differential genera of bacteria and fungi, including nitrogen-fixing bacteria such as Bradyrhizobium and Pseudolabrys, that could play a beneficial role in the establishment and development of Spanish cedar. This is the first study that surveyed the microbiota associated with Spanish cedar, and the findings obtained may help guide further functional studies and to develop knowledge-based microbial inocula to improve the establishment of this species under field conditions.

Plant-growth-promoting rhizobacteria (PGPR) influence soil fertility, plant growth, tolerance to abiotic stress, resistance to herbivorous insects, and plant interactions with other organisms. While the effects of PGPR on plant growth, fruit yield, and induced defense responses have been extensively studied, the consistent positive outcomes have fueled rapid expansion in this research field. To evaluate PGPR impacts on plant growth and interactions with phytophagous insects, we conducted a systematic meta-analysis using publications from electronic databases (e.g., PubMed, Web of Science) that reported PGPR effects on plants and insects. Effects were categorized by plant family, PGPR genus, insect feeding guild, and insect–host specialization. Our analysis revealed that PGPR generally enhanced plant growth across most plant families; however, the magnitude and direction of these effects varied significantly among PGPR genera, indicating genus-specific interactions with host plants. When assessing PGPR-mediated reductions in phytophagous insects, we found that Pseudomonas, Rhizobium, and Bacillus exhibited the weakest negative effects on insect populations. PGPR significantly reduced both monophagous and polyphagous insects, with the most pronounced negative impacts on sucking insects (e.g., aphids, whiteflies). This study highlights critical patterns in PGPR-mediated plant growth promotion across taxa and the related differential effects on phytophagous insect activity. These insights advance our understanding of PGPR applications in agroecological production systems, particularly for integrated pest management and sustainable crop productivity.

Introduction: Arbuscular mycorrhizal fungi (AMF) play a pivotal role in plant nutrition and soil stability, also play an important role for sustainable agriculture and the restoration of degraded areas. In Costa Rica, research has been conducted on the diversity of AMF in select ecosystems. However, a comprehensive compilation of these studies is currently lacking. Objective: To compile an updated list of arbuscular mycorrhizal fungi (AMF) in Costa Rica, organised by vegetation types and life zones. This will facilitate a more comprehensive understanding of their diversity and serve as a foundation for future research in taxonomy, distribution, ecology and biotechnological applications. Methods: A comprehensive literature search was conducted in Google Scholar, Scopus and Web of Science, utilising Spanish and English terms related to arbuscular mycorrhizal fungi (AMF) and Costa Rica, spanning the period from 1971 to 2024. The selection criterion included studies that identified species based on morphological or molecular criteria. The following information was integrated into a database. Results: We compiled 57 studies published from 1975-2024 and after screening 549 initial records, 115 records corresponding to species level were confirmed. 60 AMF species belonging to five orders were identified, representing 16 % of the global diversity known as Glomeromycota. The families Glomeraceae (23 species) and Acaulosporaceae (19 species) were the best represented. Furthermore, it was observed that studies have been conducted in only four of the 12 life zones described for Costa Rica, and include agroecosystems and trap crops (consortia) or pure crops (monospecific). Conclusions: It is evident that there has been a degree of advancement in the comprehension of the ecology, diversity and distribution of AMF. Nevertheless, further ecological and taxonomic research is required, encompassing both morphological and molecular analyses, to facilitate the expansion of knowledge concerning the distribution and diversity of AMF in Costa Rica.

In vitro cultivation of arbuscular mycorrhizal fungi (AMF) is challenging due to their biotrophic symbiosis. The principal aim of this study was to demonstrate the effect of establishing in vitro dual cultures of arbuscular mycorrhizal fungi (AMF) inoculated on Swietenia macrophylla (mahogany) roots on plant growth. Furthermore, it was sought to demonstrate that plant colonization by Glomeromycota can be achieved with a replicable protocol. This study established monoxenic cultures of carrot (Daucus carota) Ri T-DNA ROC inoculated with Glomus sp. on two-compartment plates. At 75 days, hyphal growth reached 223.93 mm in the root compartment and 103.71 mm in the hyphal compartment. Spores produced in vitro measured 26.14 ± 1.70 µm, smaller than ex vitro spores (101.2 ± 4.22 µm). Rhodotorula mucilaginosa was isolated from cultures and appeared to stimulate hyphal growth and root–fungal contact. From these cultures, a dual culture of mahogany inoculated with Glomus sp. was established. No significant differences were observed between inoculated and non-inoculated plants in stem length, root length, root number, or leaf number at 30 days. Spore production ranged from 10,166 to 27,696 per plate, averaging 14,795 ± 3301, with hyphal lengths of 3655.46 ± 308.75 mm. Hyphal development included running and branching patterns, with solitary and clustered spores. Spore diameter averaged 27.68 ± 3.85 µm. Arbuscular colonization reached 41.49% at 30 days and 52.13% at 75 days, exceeding rates reported for other culture systems. Monoxenic cultures are a reliable, aseptic source of high-quality inoculum, supporting biofertilizer production and biotechnological applications. These methods provide valuable tools for studies involving AMF, such as those demonstrated with mahogany.

The nitrogen-fixing symbiosis with rhizobia significantly contributes to the successful establishment of legumes in tropical environments. Here, we explored the symbiotic interactions between legumes and rhizobia across 109 tropical species. We evaluated the presence of root nodules in 72 genera spanning four Fabaceae subfamilies, encompassing 53% of the genera in Costa Rica and approximately 9.4% globally. Our analysis revealed root nodules in 78% of the species belonging to Caesalpinioideae (67%) and Papilionoideae (84%). Also, we formulated a predictive model for nodulation in legumes, with fine-root color and flower symmetry as the main predictor criteria. Nodulating taxa consistently presented higher N levels in tissues, thinner roots, and a pronounced phylogenetic influence on nodulation. We also identified the bacterial genera associated with all nodulating legumes. Caesalpinioideae formed symbiotic relationships with ten rhizobial genera, whereas Papilionoideae were associated with only four. Bradyrhizobium emerged as the predominant symbiont in nodules, while Rhizobium, Mesorhizobium, Agrobacterium, Paraburkholderia, and Cupriavidus exhibited a more restricted host range. Furthermore, genomic analysis suggests that 15 out of the 22 sequenced rhizobial strains may represent novel species. Our study enhances the understanding of the different dimensions that comprise legume-rhizobia interactions, incorporating a diverse array of previously unexamined tropical forest legume taxa.

Arbuscular mycorrhizal fungi (AMF) provide benefits to host plants by enhancing nutrition and overall fitness. In this study, AMF species were isolated from the soil rhizosphere of Jatropha curcas and were identified and evaluated for their potential in fostering the development of Jatropha seedlings within a controlled greenhouse environment. The first experiment assessed the interplay between hydric stress and AMF inoculation on mycorrhizal colonization. The next experiment examined the impact of quercetin on mycorrhizal colonization. Out of 204 glomerospores corresponding to 28 species spanning 10 genera, Acaulospora (14) and Scutellospora (5) were the most abundant taxa. Six new records of AMF for Costa Rica are reported. Mycorrhizal colonization was observed in 43.2% of Jatropha plants (34.7% by AMF typical hyphae; arbuscules 8.9%; coils 5.6%; and vesicles 5.4%). Significant survival effects due to AMF inoculation under hydric stress were observed. On day 85, non-mycorrhizal plants subjected to hydric stress showed a mere 30% survival rate, whereas their mycorrhizal counterparts under hydric stress exhibited survival rates of 80% and 100% with and without irrigation, respectively. Furthermore, plants with irrigation and mycorrhizas showed greater hydric stress tolerance and superior growth. The inoculated plants, irrespective of irrigation, demonstrated mycorrhizal colonization rates of 63% and 72%, respectively. Quercetin did not affect Jatropha’s growth, but there were differences in AMF root colonization. In summary, these findings accentuate the viability of a native consortium in augmenting Jatropha survival, warranting consideration as a potent biofertilizer within greenhouse settings. The AMF described can be used for Jatropha propagation programs.

Somatic embryogenesis (SE) is one of the most important steps during regeneration, but the molecular mechanism of SE remains unclear for Cedrela odorata. SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE (SERK) is one of the genes associated with induction of SE and is considered a marker of cells competent to form somatic embryos. Our objective was to clone and characterize the SERK1 and SERK2 gene homologues and analyze their expression patterns during in vitro morphogenesis in Spanish cedar. CoSERK1 and CoSERK2 were isolated from cedar, both share domains characteristic of the SERK family, including leucine-rich repeats, a proline-rich motif, a transmembrane domain, and kinase domains. Embryogenic cultures were established from callus cultures induced on medium supplemented with 1 mg/L dicamba. Histological sections were studied to determine the embryogenic nature of the samples. The CoSERK1 gene was highly expressed during the acquisition of embryogenic competence. The expression level of SERK1 was lower in non-embryogenic tissues and organs than in embryogenic calli, and it was higher in 3-week old embryogenic calli. CoSERK2 gene was highly expressed in leaves and shoots but no difference in expression was obtained between somatic and embryogenic tissues. These results suggest that the expression of CoSERK1 is associated with somatic embryogenesis induction and could be used as a potential marker to monitor the transition from competent to embryogenic cells and tissues in Spanish cedar.