Zhanhui Qi

The shelled pteropod Creseis acicula is a marine pelagic shellfish widely distributed from temperate to tropical seas around the world. From June to July 2020, a C. acicula bloom first happened in the Daya Bay, southern China, and its density reached the highest value (5600 ind. m⁻³) ever recorded around the world. However, few studies have investigated the responses of bacterial communities to the C. acicula bloom. In the present study, we examined the community profiles of three communities of bacteria including the free-living and particle-attached bacteria in the blooming and reference waters, and bacteria attached to the whole body and shell of C. acicula using a high-throughput sequencing method. The results indicated that the C. acicula bloom had a greater impact on particle-attached bacteria than free-living bacteria. Among the bloom-sensitive particle-attached bacteria, the predominant bacterial phyla were Pseudomonadota, Bacteroidota and Verrucomicrobiota in the blooming areas, whereas they were Actinomycetota and Planctomycetota in the reference areas. Specifically, fecal bacteria Haloferula and Halioglobus spp. were significantly enriched in the blooming waters and accumulated on C. acicula shells. Conversely, the significantly lower relative abundance of Nocardioides sp. in the blooming area and accumulated on the whole body of C. acicula indicated their attachment to particles consumed by C. acicula. Overall, our results suggested that the C. acicula bloom influenced marine bacteria, particularly particle-attached bacteria, by increasing (e.g. providing shells and feces) or decreasing (e.g. filter-feeding the suspended particles) the abundance of available substances.

Mariculture of bivalves (e.g., mussels, scallops, and oysters) is developing rapidly in coastal waters. This process releases shell debris that can accumulate on the seabed under farms. The ecological consequences of shell accumulation on the bioturbation of benthic macrofauna, which play a key role in the biogeochemical processes of sediment, are not yet fully understood. Thus, it is necessary to quantify the shell debris that accumulated under bivalves farms and evaluate whether the shell debris hinders the burrowing capacity of macrofauna. Oysters are common bivalve species cultured worldwide. However, no data are available on shell accumulation due to oyster farming and its possible effects on the burrowing capacity of polychaetes. Thus, we conducted a preliminary study on shells debris accumulation under an oyster farm in Daya Bay, southern China, and assessed the effects of shell accumulation on the burrowing activity of the polychaete Perinereis aibuhitensis in a mesocosm experiment for 32 days. The results showed that oyster farming significantly (p < 0.05) increased the accumulation of shell debris under the farm. The amount of shell debris under oyster farm (6.0 ± 1.3 kg (dry weight (DW)) m^-2 or 130.0 ± 24.7 g (DW) kg^-1 dry sediment) was approximately two times that in a non-culture area (3.5 ± 0.9 kg (DW) m^-2 or 74.9 ± 10.5 g (DW) kg^-1 dry sediment). The presence of shell debris did not affect the survival of P. aibuhitensis in experiment, but the animals in sediment with shell added exhibited greater losses of body weight compared with those without, indicating that the presence of shell causes animals to expend more energy in burrowing. The numbers of burrowing holes were lower in sediment with shell debris added compared with those in sediment without shell addition throughout the experiment. Whereas, this does not due to the P. aibuhitensis in +Shell treatment were less active in terms of their burrowing activities. The lower numbers of holes in +Shell treatment was mainly due to P. aibuhitensis were unable to use surface areas where shells were present, the amount of area occupied by shell material physically prevented P. aibuhitensis from forming burrows in these locations. The hindering effects of shells on the burrowing activity of P. aibuhitensis would decrease as the shells degraded into debris. Therefore, we recommend using small shells when conducting “shell addition” bioremediation strategies to avoid the possible negative effects of shells on burrowing by polychaetes.

Benthic sediment bacteria are important drivers for material circulation and energy flow in aquatic ecosystem, and they are sensitive to environmental changes. Large scale suspended mariculture in coastal waters induces high organic loading to the sediment through biodeposition, and causes changes in sediment biogeochemical features. However, the impacts of mariculture on sediment bacterial communities are not fully understood. In the present study, sediment samples were collected from three coastal semi-enclosed bays of China, i.e., Sanggou Bay, Daya Bay, and Maniao Bay, where large scale mariculture were carried out since the 1980s. High-throughput sequencing was used to examine the spatial and seasonal variations of bacterial communities. The results indicated that the dominant phyla of three bays were Proteobacteria (39.18–47.21%), Bacteroidetes (9.91–19.25%), and Planctomycetes (7.12–13.88%). Spatial variations played a greater role in shaping the bacterial communities than seasonal variation. The bacterial diversity indices (Chao1, Pielou’s evenness, and Shannon-Wiener index) of Sanggou Bay were significantly lower than those of Daya Bay and Maniao Bay. For seasonal variation, bacterial diversity indices in spring were significantly lower than that in autumn. Five keystone taxa belonging to Planctomycetes, Alphaproteobacteria, and Acidobacteria were identified in Sanggou Bay. Temperature, particulate organic carbon, pH, and salinity were the most important environmental factors shaping the spatial and seasonal variations of bacterial communities in the studied areas. The abundances of bacteria, particularly Bacteroidetes, Gammaproteobacteria, and Deltaproteobacteria, were significantly correlated with the mariculture-driven chemical properties of the sediment. These results indicated that intensive mariculture could induce profound and diverse impacts on the bacterial communities, and therefore modify their role in marine ecosystem. The interactions between mariculture and sediment bacterial communities should be considered in regard to mariculture management and carrying capacity.

The abundance and community structure of nirS-encoding and nirK-encoding denitrifiers inhabiting the sediment of the Pearl River Estuary was examined with quantitative PCR and...

The ciliate community together with physical-chemical variables was investigated in a subtropical, eutrophic bay of the South China Sea from January 7–10 (dry season) and April 27–30 (wet season), 2012. Both temperature and salinity exhibited typical seasonality. A total of 27 species of ciliates belonging to 19 genera were identified, and the dominant species were Strombidium globosaneum in January and Codonella rapa in April. The composition and abundance exhibited spatial and temporal fluctuations, with total mean abundance of ciliates in April (1219 ± 919 ind l-1), was much higher than that in January (283 ± 137 ind l-1). Spatially, high species numbers were found mainly near the mouth of the estuary, and the abundance decreased from inside to the mouth of the bay. Statistical analysis showed that ciliate assemblages were closely related to the environmental variables. The distribution patterns of salinity and chlorophyll a concentration were similar, suggesting that, prey abundance may correlate significantly with ciliate abundance, and salinity may not be the main factor explaining the spatial variation in the ciliate community in the study area.