JOJose Oñorbe

Jose Oñorbe

*This is an algorithmically generated author record based on publicly available information.

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Previous Organizations / Institutes

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Jose Oñorbe has a total of 399 co-authors. Here are the top co-authors by number of shared publications:


Latest Publications

  • Open Access

    Hidden figures in the sky

    by D. Stoppacher, P. Tissera, Y. Rosas-Guevara, G. Galaz, J. Oñorbe

    Context. Low-surface-brightness galaxies (LSBGs) are defined as galaxies with central surface brightness levels fainter than the night sky, making them challenging to observe. A key open question is whether their faint appearance arises from intrinsic properties or from stochastic events in their formation histories. Aims. We aim to trace the formation histories of LSBGs to assess whether their evolutionary paths differ from those of high-surface brightness galaxies (HSBGs) and to identify the key physical drivers behind these differences. Methods. We present a fast and efficient method to estimate stellar surface brightness densities in hydrodynamical simulations and a statistically robust exploration of over 150 properties in the reference run REF-L0100N1504 of the EAGLE simulation. To minimise any biases, we carefully matched the stellar and halo mass distributions of the selected LSB and HSB samples. Results. At ɀ = 0, LSBGs are typically extended, rotation-supported systems with lower stellar densities, older stellar populations, reduced star formation activity, and higher specific stellar angular momenta (j*) than their HSBG counterparts. They also exhibit larger radii of maximum circular velocity Rυmax). We identified key transition redshifts that mark the divergence of LSBG and HSBG properties: j* diverges at ɀ ~ 5–7 and Rυmax at ɀ ~ 2–3. Star formation activity and large-scale environment appear to play only a minimal role in the development of LSB features. Conclusions. LSBGs follow mass-dependent evolutionary pathways, where early rapid formation and later slowdowns, combined with their distinct structural properties, influence their response to external factors (e.g. mergers and gas accretion). Their LSB nature emerges from intrinsic dynamical and structural factors rather than environmental influences, with angular momentum as a key driver of divergence at high redshifts.


  • Open Access

    Gaseous dynamical friction: a numerical study of extended perturbers

    by B Morton, S Khochfar, J Oñorbe

    The process of momentum and energy transfer between a massive body and a background medium it is moving through is known as dynamical friction (DF). It is key to our understanding of many astrophysical systems. We present a series of high-resolution simulations of gaseous DF using a Lagrangian meshless finite mass hydrodynamics solver, the moving-mesh monotonic upstream centered scheme for conservation laws (MUSCL) solver, and the piecewise parabolic method (PPM) solver. We use a set of simulations of massive bodies, modelled as Plummer spheres, moving with Mach $0.2 \le \mathcal {M} \le 3$. We investigate at which radial distances from the perturber these solvers recover the linear point mass solution for gaseous DF. We analyse the drag force and the structure and time evolution of the wake. The different solvers agree closely. Numerical convergence is reached when the initial spatial resolution is $0.2r_s$, where $r_s$ is the softening scale of the Plummer sphere. We find that the wake structure and drag force are recovered, at the 5 per cent level, when compared beyond $4r_\mathrm{s}$. Our results predict that models using the standard linear point mass DF solution will overestimate the drag force on extended perturbers by as much as 25 per cent, for Mach$\sim$1. Finally, we consider DF in the context of galaxy clusters, where dark matter subhaloes move through circumgalactic media. We show that DF is typically in the linear regime for most subhaloes in hosting haloes $< 10^{11}$ M$_{\odot }$ but non-linear in more massive host haloes.


  • Open Access

    Forecasting constraints on the high-z IGM thermal state from the Lyman-α forest flux autocorrelation function

    by Molly Wolfson, Joseph F Hennawi, Frederick B Davies, Zarija Lukić, Jose Oñorbe

    The autocorrelation function of the Lyman-$\alpha$ (Ly $\alpha$) forest flux from high-z quasars probes the small-scale structure of the intergalactic medium (IGM). The thermal state of the IGM, determined by the physics of reionization, sets the small-scale power observed in the Ly $\alpha$ forest. To explore the sensitivity of the autocorrelation function to the IGM’s thermal state, we compute the autocorrelation function from a cosmological hydrodynamical simulation with an instantaneous reionization model and 135 post-processed thermal states. Using mock data sets of 20 quasars, we forecast constraints on $T_0$ and $\gamma$, which characterize the post-processed IGM thermal state, at $5.4 \le z \le 6$. While this model simplifies the IGM’s thermal state, it serves as a key first step in assessing future observational prospects. We also perform an inference test on mocks and re-weight out posterior distributions to guarantee that they exhibit statistically correct behaviour. At $z = 5.4$, we find that an idealized data set constrains $T_0$ to 59 per cent and $\gamma$ to 16 per cent at the 1$\sigma$ equivalent confidence level. To explore more realistic, non-instantaneous reionization scenarios, we analyse four models combining temperature and ultraviolet background (UVB) fluctuations at $z = 5.8$. We find that mock data generated from a model with both temperature and UVB fluctuations can rule out a model with only temperature fluctuations at the $> 1\sigma$ level 73.9 per cent of the time.


  • Open Access

    Hidden Figures in the Sky: Evolution of low-surface brightness galaxies from a hydro-dynamical perspective

    by D. Stoppacher, P. Tissera, Y. Rosas-Guevara, G. Galaz, J. Oñorbe

    Low-surface brightness galaxies (LSBGs) are defined as galaxies with central surface brightness levels fainter than the night sky, making them challenging to observe. A key open question is whether their faint appearance arises from intrinsic properties or stochastic events in their formation histories. We aim to trace the formation histories of LSBGs to assess whether their evolutionary paths differ from those of high-surface brightness galaxies (HSBGs), and to identify the key physical drivers behind these differences. We present a fast and efficient method to estimate stellar surface brightness densities in hydro-dynamical simulations and a statistically robust exploration of over 150 properties in the reference run \textsc{Ref-L0100N1504} of the \texttt{EAGLE} simulation. To minimise biases, we carefully match the stellar and halo mass distributions of the selected LSB and HSB samples. At $z=0$, LSBGs are typically extended, rotation-supported systems with lower stellar densities, older stellar populations, reduced star formation activity, and higher specific stellar angular momenta $j_*$ than their HSBG counterparts. They also exhibit larger radii of maximum circular velocity ($R_{\mathrm{Vmax}}$). We identify key transition redshifts that mark the divergence of LSBG and HSBG properties: $j_*$ diverges at $z\sim5-7$ and $R_{\mathrm{Vmax}}$ at $z\sim2-3$. Star formation activity and large-scale environment seem to play only a minimal role in the development of LSB features. LSBGs follow mass-dependent evolutionary pathways, where early rapid formation and later slowdowns, combined with their distinct structural properties, influence their response to external factors like mergers and gas accretion. Their LSB nature emerges from intrinsic dynamical and structural factors rather than environmental influences, with angular momentum as a key driver of divergence at high redshifts.

  • Open Access

    The impact of varying inhomogeneous reionization histories on metrics of Ly α opacity

    by Caitlin C Doughty, Joseph F Hennawi, Jose Oñorbe, Frederick B Davies, Zarija Lukić

    The epoch of hydrogen reionization is complete by $z=5$, but its progression at higher redshifts is uncertain. Measurements of Ly $\alpha$ forest opacity show large scatter at $z{<}6$, suggestive of spatial fluctuations in neutral fraction, temperature, or ionizing background, either individually or in combination. However, there are degeneracies in the impact of such fluctuations, necessitating careful modelling. We develop a framework for modelling the reionization history and associated temperature fluctuations, with the intention of incorporating ionizing background fluctuations at a later time. We generate several reionization histories using seminumerical code AMBER, and implement them in the Nyx cosmological hydrodynamics code to examine the impact on the evolution of gas within the simulation and the associated metrics of the Ly $\alpha$ forest opacity. We find that the pressure smoothing scale within the intergalactic medium is strongly correlated with the adiabatic index of the temperature–density relation. We find that while models with 20 000 K photoheating at reionization are better able to reproduce the shape of the observed $z=5$ 1D flux power spectrum than colder ones, they fail to match the highest wavenumbers. The simulated autocorrelation function and optical depth distributions are systematically low and narrow, respectively, compared to the observed values, but are in better agreement when the reionization history is longer in duration, more symmetric in its distribution of reionization redshifts, or if there are remaining neutral regions at $z{<}6$.


  • Open Access

    Measurements of the thermal and ionization state of the intergalactic medium during the cosmic afternoon

    by Teng Hu, Vikram Khaire, Joseph F Hennawi, Todd M Tripp, Jose Oñorbe, Michael Walther, Zarija Lukić

    We perform the first measurement of the thermal and ionization state of the intergalactic medium (IGM) across $0.9 \lt z \lt 1.5$ using 301 Ly $\,\alpha$ absorption lines fitted from 12 archival Hubble Space Telescope Space Telescope Imaging Spectrograph quasar spectra. We employ the machine-learning-based inference method that uses joint Doppler parameter–column density ($b{-}N_{{\rm {H\,{\small I}}}{}}$) distributions obtained from Ly$\,\alpha$ forest decomposition. Our results show that the H i photoionization rates, $\Gamma _{{\rm {H\,{\small I}}}{}}$, agree with recent ultraviolet background synthesis models, with $\log (\Gamma _{{\rm{H\,{\small I}}}}/\text{s}^{-1})={-11.79}^{+0.18}_{-0.15}$, ${-11.98}^{+0.09}_{-0.09}$, and ${-12.32}^{+0.10}_{-0.12}$ at $z=1.4$, 1.2, and 1, respectively. We obtain the IGM temperature at the mean density, $T_0$, and the adiabatic index, $\gamma$, as $[\log (T_0/\text{K}), \gamma ]=$ [${4.13}^{+0.12}_{-0.10}$, ${1.34}^{+0.10}_{-0.15}$], $[{3.79}^{+0.11}_{-0.11}$, ${1.70}^{+0.09}_{-0.09}]$, and $[{4.12}^{+0.15}_{-0.25}$, ${1.34}^{+0.21}_{-0.26}]$ at $z=1.4$, 1.2, and 1. Our measurements of $T_0$ at $z=1.4$ and 1.2 are consistent with the trend predicted from previous $z\lt 3$ temperature measurements and theoretical expectations, where the IGM cools down after He ii reionization in the absence of any non-standard heating. However, our $T_0$ measurement at $z=1$ shows unexpectedly high IGM temperature. Given the relatively large uncertainty in these measurements, where $\sigma _{T_0} \sim 5000$ K, mostly emanating from the limited size of our data set, we cannot conclude whether the IGM cools down as expected. Lastly, we generate mock data sets to test the constraining power of future measurement with larger data sets. The results demonstrate that, with redshift path-length $\Delta z \sim 2$ for each redshift bin, three times the current data set, we can constrain the $T_0$ of IGM within 1500 K, which would be sufficient to constrain the IGM thermal history at $z \lt 1.5$ conclusively.


  • Open Access

    First measurement of the Mg ii forest correlation function in the Epoch of Reionization

    by Suk Sien Tie, Joseph F Hennawi, Feige Wang, Silvia Onorato, Jinyi Yang, Eduardo Bañados, Frederick B Davies, Jose Oñorbe

    Strong low-ionization transitions like the Mg ii λ2796, 2804Å doublet are believed to produce a detectable ‘metal-line forest’, if metals pollute the neutral IGM. We measure the auto-correlation of the Mg II forest transmission using ten ground based z ≥ 6.80 quasar spectra probing the redshift range |$5.96 < z_{\rm Mg\, {\small II}} < 7.42$| (⁠|$z_{\rm Mg\, {\small II}, median} = 6.47$|⁠). The correlation function exhibits strong small-scale clustering and a pronounced peak at the doublet velocity (Δv = 768 km s−1) arising from discrete absorbers in the CGM of galaxies. After these strong absorbers are identified and masked the signal is consistent with noise. Our measurements are compared to a suite of models generated by combining a large hydrodynamical simulation with a semi-numerical reionization topology, assuming a simple uniform enrichment model. We obtain a 95% credibility upper limit of [Mg/H] < −3.73 at |$z_{\rm Mg\, {\small II},median} = 6.47$|⁠, assuming uninformative priors on [Mg/H] and the IGM neutral fraction |$x_{\rm {H\, {\small I}}}$|⁠. Splitting the data into low-z (⁠|$5.96 < z_{\rm Mg\, {\small II}} < 6.47$|⁠; |$z_{\rm Mg\, {\small II},median} = 6.235$|⁠) and high-z (⁠|$6.47 < z_{\rm Mg\, {\small II}} < 7.42$|⁠; |$z_{\rm Mg\, {\small II},median} = 6.72$|⁠) subsamples again yields null-detections and 95% upper limits of [Mg/H] < −3.75 and [Mg/H] < −3.45, respectively. These first measurements set the stage for making the Mg II forest an emerging tool to precisely constrain the Universe reionization and enrichment history.


  • Open Access

    The impact of the WHIM on the IGM thermal state determined from the low-z Lyman α forest

    by Teng Hu, Vikram Khaire, Joseph F Hennawi, Jose Oñorbe, Michael Walther, Zarija Lukic, Frederick Davies

    At z ≲ 1, shock heating caused by large-scale velocity flows and possibly violent feedback from galaxy formation, converts a significant fraction of the cool gas (T ∼ 104 K) in the intergalactic medium (IGM) into warm–hot phase (WHIM) with T > 105 K, resulting in a significant deviation from the previously tight power-law IGM temperature–density relationship, $T=T_0 (\rho / {\bar{\rho }})^{\gamma -1}$. This study explores the impact of the WHIM on measurements of the low-z IGM thermal state, [T0, γ], based on the b–$N_{{\rm H\,{\small I}}} $ distribution of the Ly α forest. Exploiting a machine learning-enabled simulation-based inference method trained on Nyx hydrodynamical simulations, we demonstrate that [T0, γ] can still be reliably measured from the b–$N_{{\rm H\,{\small I}}} $ distribution at z = 0.1, notwithstanding the substantial WHIM in the IGM. To investigate the effects of different feedback, we apply this inference methodology to mock spectra derived from the IllustrisTNG and Illustris simulations at z = 0.1. The results suggest that the underlying [T0, γ] of both simulations can be recovered with biases as low as |Δlog (T0/K)| ≲ 0.05 dex, |Δγ| ≲ 0.1, smaller than the precision of a typical measurement. Given the large differences in the volume-weighted WHIM fractions between the three simulations (Illustris 38 per cent, IllustrisTNG 10 per cent, and Nyx 4 per cent), we conclude that the b–$N_{{\rm H\,{\small I}}} $ distribution is not sensitive to the WHIM under realistic conditions. Finally, we investigate the physical properties of the detectable Ly α absorbers, and discover that although their T and Δ distributions remain mostly unaffected by feedback, they are correlated with the photoionization rate used in the simulation.


  • Open Access

    Convergence of small scale Ly α structure at high-z under different reionization scenarios

    by Caitlin C Doughty, Joseph F Hennawi, Frederick B Davies, Zarija Lukić, Jose Oñorbe

    The Lyα forest (LAF) at z > 5 probes the thermal and reionization history of the intergalactic medium (IGM) and the nature of dark matter, but its interpretation requires comparison to cosmological hydrodynamical simulations. At high-z, convergence of these simulations is more exacting since transmission is dominated by underdense voids that are challenging to resolve. With evidence mounting for a late end to reionization, small structures down to the sub-kpc level may survive to later times than conventionally thought due to the reduced time for pressure smoothing to impact the gas, further tightening simulation resolution requirements. We perform a suite of simulations using the Eulerian cosmological hydrodynamics code Nyx, spanning domain sizes of 1.25 − 10 h−1 Mpc and 5 − 80 h−1 kpc cells, and explore the interaction of these variables with the timing of reionization on the properties of the matter distribution and the simulated LAF at z = 5.5. In observable Lyα power, convergence within 10% is achieved for k < 0.1 s/km, but larger k shows deviation of up to 20 per cent. While a later reionization retains more small structure in the density field, because of the greater thermal broadening there is little difference in the convergence of LAF power between early (z = 9) and later (z = 6) reionizations. We conclude that at z ∼ 5.5, resolutions of 10 kpc are necessary for convergence of LAF power at k < 0.1 s/km, while higher-k modes require higher resolution, and that the timing of reionization does not significantly impact convergence given realistic photoheating.


  • Open Access

    Modelling the cosmological Lyman–Werner background radiation field in the early Universe

    by Andrea Incatasciato, Sadegh Khochfar, Jose Oñorbe

    The Lyman-Werner (LW) radiation field is a key ingredient in the chemo-thermal evolution of gas in the Early Universe, as it dissociates H2 molecules, the primary cooling channel in an environment devoid of metals and dust. Despite its important role, it is still not implemented in cosmological simulations on a regular basis, in contrast to the ionising UV background. This is in part due to uncertainty in the source modelling, their spectra and abundance, as well as the detailed physics involved in the propagation of the photons and their interactions with the molecules. The goal of this work is to produce an accurate model of the LW radiation field at z ≥ 6, by post-processing the physics-rich high-resolution FiBY simulation. Our novelties include updated cross sections for H2, |$\rm {H^-}$| and |$\rm {H^+_2}$| chemical species, IGM absorption by neutral Hydrogen and various spectral models for Population III and Population II stars. With our fiducial set of parameters, we show that the mean LW intensity steadily increases by three orders of magnitude from z ∼ 23 to z ∼ 6, while spatial inhomogeneities originate from massive star-forming galaxies that dominate the photon budget up to a distance of ∼100 proper kpc. Our model can be easily applied to other simulations or semi-analytical models as an external radiation field that regulates the formation of stars and massive black hole seeds in high-z low-mass halos.