Shou-De Lin
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Shou-De Lin has a total of 264 co-authors. Here are the top co-authors by number of shared publications:
Cheng-Te Li
Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan
28 shared publications- Yun-Da Tsai
National Taiwan University
14 shared publications - Tsung-Ting Kuo
Division of Biomedical Informatics, Department of Medicine, University of California San Diego, La Jolla, USA
13 shared publications Hsun-Ping Hsieh
National Taiwan University, Taipei, Taiwan ROC
12 shared publications- Cheng-Te Li
National Cheng Kung University, Tainan, Taiwan
8 shared publications Man-Kwan Shan
National Chengchi University, Taipei, Taiwan Roc
7 shared publications
Latest Publications
- Open Access
- 13 November 2026
- Published by Association for Computing Machinery (ACM)
- p. 10-18
VerifiQuant: Governance-by-Execution for Financial LLM Workflows
- 13 November 2026
- Published by Association for Computing Machinery (ACM)
- p. 10-18
Open AccessVerifiQuant: Governance-by-Execution for Financial LLM Workflows
- Open Access
- 8 August 2026
- Published by Association for Computing Machinery (ACM)
- p. 366-377
MORE-FE: Multi-Operator and Reinforcement Learning-Enhanced Evolution for LLM Feature Engineering
- 8 August 2026
- Published by Association for Computing Machinery (ACM)
- p. 366-377
Open AccessMORE-FE: Multi-Operator and Reinforcement Learning-Enhanced Evolution for LLM Feature Engineering
- Open Access
Concept-Aware Privacy Mechanisms for Defending Embedding Inversion Attacks
Text embeddings enable numerous NLP applications but face severe privacy risks from embedding inversion attacks, which can expose sensitive attributes or reconstruct raw text. Existing differential privacy defenses assume uniform sensitivity across embedding dimensions, leading to excessive noise and degraded utility. We propose SPARSE, a user-centric framework for concept-specific privacy protection in text embeddings. SPARSE combines (1) differentiable mask learning to identify privacy-sensitive dimensions for user-defined concepts, and (2) the Mahalanobis mechanism that applies elliptical noise calibrated by dimension sensitivity. Unlike traditional spherical noise injection, SPARSE selectively perturbs privacy-sensitive dimensions while preserving non-sensitive semantics. Evaluated across six datasets with three embedding models and attack scenarios, SPARSE consistently reduces privacy leakage while achieving superior downstream performance compared to state-of-the-art DP methods.
Open AccessConcept-Aware Privacy Mechanisms for Defending Embedding Inversion Attacks
Text embeddings enable numerous NLP applications but face severe privacy risks from embedding inversion attacks, which can expose sensitive attributes or reconstruct raw text. Existing differential privacy defenses assume uniform sensitivity across embedding dimensions, leading to excessive noise and degraded utility. We propose SPARSE, a user-centric framework for concept-specific privacy protection in text embeddings. SPARSE combines (1) differentiable mask learning to identify privacy-sensitive dimensions for user-defined concepts, and (2) the Mahalanobis mechanism that applies elliptical noise calibrated by dimension sensitivity. Unlike traditional spherical noise injection, SPARSE selectively perturbs privacy-sensitive dimensions while preserving non-sensitive semantics. Evaluated across six datasets with three embedding models and attack scenarios, SPARSE consistently reduces privacy leakage while achieving superior downstream performance compared to state-of-the-art DP methods.
- Open Access
- 19 November 2025
- Published by Association for Computing Machinery (ACM)
- p. 4776-4778
Poster: When Logs Misbehave: Retrieving Known APTs from Noisy Graphs
- 19 November 2025
- Published by Association for Computing Machinery (ACM)
- p. 4776-4778
Open AccessPoster: When Logs Misbehave: Retrieving Known APTs from Noisy Graphs
- Open Access
Training LLMs Beyond Next Token Prediction -- Filling the Mutual Information Gap
Optimizing training performance in large language models (LLMs) remains an essential challenge, particularly in improving model performance while maintaining computational costs. This work challenges the conventional approach of training LLMs using next-token prediction (NTP), arguing that by predicting information-rich tokens during training, there is a more effective way to train LLMs. We investigate the impact of the proposed solution in three kinds of tasks for LLMs: arithmetic, multi-label classification of text, and natural-language generation. This work offers a principled approach to optimizing LLM training, advancing both model performance and theoretical understanding of the target-token selection strategies.
Open AccessTraining LLMs Beyond Next Token Prediction -- Filling the Mutual Information Gap
Optimizing training performance in large language models (LLMs) remains an essential challenge, particularly in improving model performance while maintaining computational costs. This work challenges the conventional approach of training LLMs using next-token prediction (NTP), arguing that by predicting information-rich tokens during training, there is a more effective way to train LLMs. We investigate the impact of the proposed solution in three kinds of tasks for LLMs: arithmetic, multi-label classification of text, and natural-language generation. This work offers a principled approach to optimizing LLM training, advancing both model performance and theoretical understanding of the target-token selection strategies.
- 15 June 2025
- Published by Springer Nature
- p. 265-277
LinearAPT: An Adaptive Algorithm for the Fixed-Budget Thresholding Linear Bandit Problem
- 15 June 2025
- Published by Springer Nature
- p. 265-277
LinearAPT: An Adaptive Algorithm for the Fixed-Budget Thresholding Linear Bandit Problem
- Open Access
- 6 June 2025
- Published by MDPI AG in Preprints.org
Can Uncertainty Metrics Guide Search? Evaluating Search-Time Decision-Making in Large Language Models
Sampling-based search methods for Large Language Models (LLMs), such as Chain of Thought (CoT) and Tree of Thought (ToT), improve accuracy by exploring multiple reasoning paths. These approaches can be enhanced by search algorithms like Monte Carlo Tree Search (MCTS) and Bandit strategies, which rely on effective uncertainty estimation. While many uncertainty metrics have been proposed for LLMs, we argue that most of them are primarily descriptive, as they capture model confidence rather than prescriptive tools for guiding search toward correct answers. In this study, we evaluate whether existing uncertainty metrics can support search-time decision-making through two diagnostic tasks: Answer Selection and Answer Refinement. Our results show that while current metrics help flag risky or error-prone responses, they fall short in guiding search toward correctness. This highlights the need for optimization-aware uncertainty metrics explicitly designed to support correctness-driven decisions. Code is available at link.
- 6 June 2025
- Published by MDPI AG in Preprints.org
Open AccessCan Uncertainty Metrics Guide Search? Evaluating Search-Time Decision-Making in Large Language Models
Sampling-based search methods for Large Language Models (LLMs), such as Chain of Thought (CoT) and Tree of Thought (ToT), improve accuracy by exploring multiple reasoning paths. These approaches can be enhanced by search algorithms like Monte Carlo Tree Search (MCTS) and Bandit strategies, which rely on effective uncertainty estimation. While many uncertainty metrics have been proposed for LLMs, we argue that most of them are primarily descriptive, as they capture model confidence rather than prescriptive tools for guiding search toward correct answers. In this study, we evaluate whether existing uncertainty metrics can support search-time decision-making through two diagnostic tasks: Answer Selection and Answer Refinement. Our results show that while current metrics help flag risky or error-prone responses, they fall short in guiding search toward correctness. This highlights the need for optimization-aware uncertainty metrics explicitly designed to support correctness-driven decisions. Code is available at link.
- Open Access
Uncertainty Profiles for LLMs: Uncertainty Source Decomposition and Adaptive Model-Metric Selection
Large language models (LLMs) often generate fluent but factually incorrect outputs, known as hallucinations, which undermine their reliability in real-world applications. While uncertainty estimation has emerged as a promising strategy for detecting such errors, current metrics offer limited interpretability and lack clarity about the types of uncertainty they capture. In this paper, we present a systematic framework for decomposing LLM uncertainty into four distinct sources, inspired by previous research. We develop a source-specific estimation pipeline to quantify these uncertainty types and evaluate how existing metrics relate to each source across tasks and models. Our results show that metrics, task, and model exhibit systematic variation in uncertainty characteristic. Building on this, we propose a method for task specific metric/model selection guided by the alignment or divergence between their uncertainty characteristics and that of a given task. Our experiments across datasets and models demonstrate that our uncertainty-aware selection strategy consistently outperforms baseline strategies, helping us select appropriate models or uncertainty metrics, and contributing to more reliable and efficient deployment in uncertainty estimation.
Open AccessUncertainty Profiles for LLMs: Uncertainty Source Decomposition and Adaptive Model-Metric Selection
Large language models (LLMs) often generate fluent but factually incorrect outputs, known as hallucinations, which undermine their reliability in real-world applications. While uncertainty estimation has emerged as a promising strategy for detecting such errors, current metrics offer limited interpretability and lack clarity about the types of uncertainty they capture. In this paper, we present a systematic framework for decomposing LLM uncertainty into four distinct sources, inspired by previous research. We develop a source-specific estimation pipeline to quantify these uncertainty types and evaluate how existing metrics relate to each source across tasks and models. Our results show that metrics, task, and model exhibit systematic variation in uncertainty characteristic. Building on this, we propose a method for task specific metric/model selection guided by the alignment or divergence between their uncertainty characteristics and that of a given task. Our experiments across datasets and models demonstrate that our uncertainty-aware selection strategy consistently outperforms baseline strategies, helping us select appropriate models or uncertainty metrics, and contributing to more reliable and efficient deployment in uncertainty estimation.
- Open Access
- 11 April 2025
- Published by Association for Computing Machinery (ACM) in ACM Transactions on Intelligent Systems and Technology
Learning on Missing Tabular Data: Attention with Self-Supervision, Not Imputation, is All You Need
Learning from data with missing values is a common challenge in real-world applications. Existing approaches for handling data incompleteness often involve imputation, which can introduce errors that propagate into downstream tasks or impose assumptions that limit the support for heterogeneous feature types. To address these issues, we propose Missing Feature Attention Network ( MFAN ), an end-to-end label prediction model that directly consumes incomplete data without requiring imputation. MFAN flexibly accommodates both continuous and categorical features through learnable embeddings, and leverages a transformer encoder with self-attention to capture the correlation among features as well as the correlation between features and missingness . This attention-based mechanism allows missing features to benefit from relationships learned among observed features, leading to enhanced hidden representations and robust prediction performance. Additionally, we introduce auxiliary self-supervised pre-training tasks that further guide the attention mechanism in modeling missingness. Experimental results on eight regression and seven classification datasets demonstrate MFAN ’s superiority over state-of-the-art end-to-end methods and imputation-based approaches. Comprehensive ablation studies confirm the effectiveness of each MFAN component, underscoring the importance of explicitly modeling correlations among observed and missing features.
- 11 April 2025
- Published by Association for Computing Machinery (ACM) in ACM Transactions on Intelligent Systems and Technology
Open AccessLearning on Missing Tabular Data: Attention with Self-Supervision, Not Imputation, is All You Need
Learning from data with missing values is a common challenge in real-world applications. Existing approaches for handling data incompleteness often involve imputation, which can introduce errors that propagate into downstream tasks or impose assumptions that limit the support for heterogeneous feature types. To address these issues, we propose Missing Feature Attention Network ( MFAN ), an end-to-end label prediction model that directly consumes incomplete data without requiring imputation. MFAN flexibly accommodates both continuous and categorical features through learnable embeddings, and leverages a transformer encoder with self-attention to capture the correlation among features as well as the correlation between features and missingness . This attention-based mechanism allows missing features to benefit from relationships learned among observed features, leading to enhanced hidden representations and robust prediction performance. Additionally, we introduce auxiliary self-supervised pre-training tasks that further guide the attention mechanism in modeling missingness. Experimental results on eight regression and seven classification datasets demonstrate MFAN ’s superiority over state-of-the-art end-to-end methods and imputation-based approaches. Comprehensive ablation studies confirm the effectiveness of each MFAN component, underscoring the importance of explicitly modeling correlations among observed and missing features.