Mark Gerard Moloney
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Mark Gerard Moloney has a total of 346 co-authors. Here are the top co-authors by number of shared publications:
Jack E. Baldwin
The Dyson Perrins Laboratory, University of Oxford, South Parks Road, Oxford. OX1 3QY. U.S.A.
14 shared publicationsAmber L. Thompson
Chemistry Research Laboratory , University of Oxford , Mansfield Road , Oxford OX1 3TA , U.K.
13 shared publicationsAlexander Pretsch
Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, UK
11 shared publicationsDagmar Pretsch
Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, UK
11 shared publicationsKirsten E. Christensen
The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK
10 shared publicationsAndrew G. Brewster
The Department of Chemistry, The University of Oxford, Central Research Laboratory, Mansfield Road, Oxford, UK OX1 3TA
7 shared publications
Latest Publications
- Open Access
- 5 December 2025
- Published by Wiley in Chemphyschem
- Vol. 27 (1) , e202500438
Properties of Bisdiazo Compounds and Their Derived Carbenes via Density Functional Theory
To better understand the properties of carbene and biscarbene species derived from bisdiazo compounds with varied terminal groups, a density functional theory (DFT) study was conducted on bisdiazo compounds with four terminal groups (bisdiazo‐X, where X=H, Me, NO 2 and NH 2 ) and their mono‐ and dicarbene derivatives. The studies included computation of their frontier molecular orbitals (FMOs), electronic structures, electrostatic potential (ESP) and polarity, as well as their IR and UV‐vis spectra and their color in THF solutions. For bisdiazo compounds at both ground and excited states, the computational results matched well with published experimental data. The formation of carbene species from bisdiazo compounds was confirmed via a generalized IRC path calculation and IGMH analysis. The reaction sites and the lone pair electron locations were predicted using minimum ESP (i.e., ESPmin) and orbital‐weighted Fukui dual descriptor for the possible intermediates in the transition state, along with spin density analysis through EPR/ESR predictions. Additionally, physisorption of bisdiazo and carbene species onto single‐layer graphene was evaluated through geometry optimization, in which π‐π stacking among the aromatic‐ring likely determines surface packing via the simulated scanning tunnelling microscope (STM) images. The carbene species permit controlled growth of the patterned functional organic surfaces.
- 5 December 2025
- Published by Wiley in Chemphyschem
- Vol. 27 (1) , e202500438
Open AccessProperties of Bisdiazo Compounds and Their Derived Carbenes via Density Functional Theory
To better understand the properties of carbene and biscarbene species derived from bisdiazo compounds with varied terminal groups, a density functional theory (DFT) study was conducted on bisdiazo compounds with four terminal groups (bisdiazo‐X, where X=H, Me, NO 2 and NH 2 ) and their mono‐ and dicarbene derivatives. The studies included computation of their frontier molecular orbitals (FMOs), electronic structures, electrostatic potential (ESP) and polarity, as well as their IR and UV‐vis spectra and their color in THF solutions. For bisdiazo compounds at both ground and excited states, the computational results matched well with published experimental data. The formation of carbene species from bisdiazo compounds was confirmed via a generalized IRC path calculation and IGMH analysis. The reaction sites and the lone pair electron locations were predicted using minimum ESP (i.e., ESPmin) and orbital‐weighted Fukui dual descriptor for the possible intermediates in the transition state, along with spin density analysis through EPR/ESR predictions. Additionally, physisorption of bisdiazo and carbene species onto single‐layer graphene was evaluated through geometry optimization, in which π‐π stacking among the aromatic‐ring likely determines surface packing via the simulated scanning tunnelling microscope (STM) images. The carbene species permit controlled growth of the patterned functional organic surfaces.
- Open Access
- 23 April 2025
- Published by Royal Society of Chemistry (RSC) in Polymer Chemistry
- Vol. 16 (21) , 2480-2493
Polymerization behaviour of biscarbenes derived by thermolysis of bisdiazo compounds
The collapse of bisdiazo compounds with different terminal groups to generate reactive biscarbene intermediates has provided evidence for homopolymerization, in a process which proceeds in the absence of catalysts and is tolerant of oxygen.
- 23 April 2025
- Published by Royal Society of Chemistry (RSC) in Polymer Chemistry
- Vol. 16 (21) , 2480-2493
Open AccessPolymerization behaviour of biscarbenes derived by thermolysis of bisdiazo compounds
The collapse of bisdiazo compounds with different terminal groups to generate reactive biscarbene intermediates has provided evidence for homopolymerization, in a process which proceeds in the absence of catalysts and is tolerant of oxygen.
- Open Access
- 17 February 2025
- Published by American Chemical Society (ACS) in ACS Applied Materials & Interfaces
- Vol. 17 (8) , 12875-12882
A Robust Molecular Rectifier Based on Ferrocene-Functionalized Bis(diarylcarbene) on Gold
While thiol-based adsorbates have achieved significant success in surface modification and molecular electronics, their thermal and storage instability has hindered long-term commercial viability. Carbene-based thin films offer a promising alternative due to their enhanced stability; however, their molecular electronic properties after postfunctionalization remain to be investigated. In this study, by attaching a ferrocene (Fc) unit to a bis(diarylcarbene)-modified gold surface via carbodiimide coupling, the system exhibits diode behavior with a current rectification ratio of ∼100. This diode behavior is highly temperature-dependent, indicating that hopping is the dominant mechanism for current rectification. Notably, the system demonstrated excellent electrical stability under ambient storage conditions for over 6 months. Our work highlights the potential for designing carbene-based molecular junctions through postmodification and for developing durable functional molecular electronic devices.
- 17 February 2025
- Published by American Chemical Society (ACS) in ACS Applied Materials & Interfaces
- Vol. 17 (8) , 12875-12882
Open AccessA Robust Molecular Rectifier Based on Ferrocene-Functionalized Bis(diarylcarbene) on Gold
While thiol-based adsorbates have achieved significant success in surface modification and molecular electronics, their thermal and storage instability has hindered long-term commercial viability. Carbene-based thin films offer a promising alternative due to their enhanced stability; however, their molecular electronic properties after postfunctionalization remain to be investigated. In this study, by attaching a ferrocene (Fc) unit to a bis(diarylcarbene)-modified gold surface via carbodiimide coupling, the system exhibits diode behavior with a current rectification ratio of ∼100. This diode behavior is highly temperature-dependent, indicating that hopping is the dominant mechanism for current rectification. Notably, the system demonstrated excellent electrical stability under ambient storage conditions for over 6 months. Our work highlights the potential for designing carbene-based molecular junctions through postmodification and for developing durable functional molecular electronic devices.
- Open Access
- 12 November 2024
- Published by Elsevier in Composites Part B: Engineering
- Vol. 289
On demand thermal surface modification of carbon fiber for improved interfacial shear strength
- 12 November 2024
- Published by Elsevier in Composites Part B: Engineering
- Vol. 289
Open AccessOn demand thermal surface modification of carbon fiber for improved interfacial shear strength
- 3 November 2023
- Published by Elsevier in Biochemical and Biophysical Research Communications
- Vol. 688, 149126
Promising applications of phyto-fabricated silver nanoparticles: Recent trends in biomedicine
- 3 November 2023
- Published by Elsevier in Biochemical and Biophysical Research Communications
- Vol. 688, 149126
Promising applications of phyto-fabricated silver nanoparticles: Recent trends in biomedicine
- Open Access
- 26 May 2023
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 21 (23) , 4801-4809
Synthesis of fused tetramate-oxazolidine and -imidazolidine derivatives and their antibacterial activity
A chemoselective route which provides direct access to bicyclic tetramates, making use of Dieckmann cyclisation of functionalised oxazolidines and imidazolidines derived from an aminomalonate, is reported; calculations suggest that the observed chemoselectivity is kinetically controlled and leads to the thermodynamically most stable product. Some compounds in the library showed modest antibacterial activity against Gram-positive bacteria, and this activity is maximal in a well-defined region of chemical space (554 < Mw < 722 g mol−1; 5.78 < cLogP < 7.16; 788 < MSA < 972 Å2; 10.3 < rel. PSA < 19.08).
- 26 May 2023
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 21 (23) , 4801-4809
Open AccessSynthesis of fused tetramate-oxazolidine and -imidazolidine derivatives and their antibacterial activity
A chemoselective route which provides direct access to bicyclic tetramates, making use of Dieckmann cyclisation of functionalised oxazolidines and imidazolidines derived from an aminomalonate, is reported; calculations suggest that the observed chemoselectivity is kinetically controlled and leads to the thermodynamically most stable product. Some compounds in the library showed modest antibacterial activity against Gram-positive bacteria, and this activity is maximal in a well-defined region of chemical space (554 < Mw < 722 g mol−1; 5.78 < cLogP < 7.16; 788 < MSA < 972 Å2; 10.3 < rel. PSA < 19.08).
- Open Access
- 14 April 2023
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 21 (19) , 4061-4071
Tetramate derivatives by chemoselective Dieckmann ring closure ofallo-phenylserines, and their antibacterial activity
A general route which provides direct access to substituted bicyclic tetramates, making use of Dieckmann cyclisation of oxazolidines derivatives derived from allo-phenylserines, is reported. Of interest is the high level of diastereoselectivity observed for the N-acylation reaction of oxazolidines and the complete chemoselectivity of their ring closure in the Dieckmann cyclisation. Significantly, the sense of the chemoselectivity is different to earlier reported threo-phenylserine systems, showing the importance of steric bulk around the bicyclic ring system. The derived C7-carboxamidotetramates, but not C7-acyl systems, exhibited potent antibacterial activity against MRSA, with the most active compounds exhibiting well-defined physicochemical and structure-activity properties. This work clearly demonstrates that densely functionalised tetramates are both readily available and may exhibit high levels of antibacterial activity.
- 14 April 2023
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 21 (19) , 4061-4071
Open AccessTetramate derivatives by chemoselective Dieckmann ring closure ofallo-phenylserines, and their antibacterial activity
A general route which provides direct access to substituted bicyclic tetramates, making use of Dieckmann cyclisation of oxazolidines derivatives derived from allo-phenylserines, is reported. Of interest is the high level of diastereoselectivity observed for the N-acylation reaction of oxazolidines and the complete chemoselectivity of their ring closure in the Dieckmann cyclisation. Significantly, the sense of the chemoselectivity is different to earlier reported threo-phenylserine systems, showing the importance of steric bulk around the bicyclic ring system. The derived C7-carboxamidotetramates, but not C7-acyl systems, exhibited potent antibacterial activity against MRSA, with the most active compounds exhibiting well-defined physicochemical and structure-activity properties. This work clearly demonstrates that densely functionalised tetramates are both readily available and may exhibit high levels of antibacterial activity.
- Open Access
- 10 February 2023
- Published by Royal Society of Chemistry (RSC) in Journal of Materials Chemistry B
- Vol. 11 (11) , 2377-2388
Surface modified materials for active capture of enzymes
The insertion of bis(diarylcarbene)s onto a glass fiber (GF) membrane surface provided an active coating for the direct capture of protein – exemplified by the enzyme, cellulase – through a mild diazonium coupling process which does not require additional coupling agents.
- 10 February 2023
- Published by Royal Society of Chemistry (RSC) in Journal of Materials Chemistry B
- Vol. 11 (11) , 2377-2388
Open AccessSurface modified materials for active capture of enzymes
The insertion of bis(diarylcarbene)s onto a glass fiber (GF) membrane surface provided an active coating for the direct capture of protein – exemplified by the enzyme, cellulase – through a mild diazonium coupling process which does not require additional coupling agents.
- Open Access
- 21 December 2022
- Published by MDPI AG in Antibiotics
- Vol. 12 (1) , 9
Tricyclic Fused Lactams by Mukaiyama Cyclisation of Phthalimides and Evaluation of their Biological Activity
We report that phthalimides may be cyclized using a Mukaiyama-type aldol coupling to give variously substituted fused lactam (1,2,3,9b-tetrahydro-5H-pyrrolo[2,1-a]isoindol-5-one) systems. This novel process shows a high level of regioselectivity for o-substituted phthalimides, dictated by steric and electronic factors, but not for m-substituted phthalimides. The initial aldol adduct is prone to elimination, giving 2,3-dihydro-5H-pyrrolo[2,1-a]isoindol-5-ones, and the initial cyclisation can be conducted in such a way that aldol cyclisation-elimination is achievable in a one-pot approach. The 2,3-dihydro-5H-pyrrolo[2,1-a]isoindol-5-ones possess cross conjugation and steric effects which significantly influence the reactivity of several functional groups, but conditions suitable for epoxidation, ester hydrolysis and amide formation, and reduction, which provide for ring manipulation, were identified. Many of the derived lactam systems, and especially the eliminated systems, show low solubility, which compromises biological activity, although in some cases, antibacterial and cytotoxic activity was found, and this new class of small molecule provides a useful skeleton for further elaboration and study.
- 21 December 2022
- Published by MDPI AG in Antibiotics
- Vol. 12 (1) , 9
Open AccessTricyclic Fused Lactams by Mukaiyama Cyclisation of Phthalimides and Evaluation of their Biological Activity
We report that phthalimides may be cyclized using a Mukaiyama-type aldol coupling to give variously substituted fused lactam (1,2,3,9b-tetrahydro-5H-pyrrolo[2,1-a]isoindol-5-one) systems. This novel process shows a high level of regioselectivity for o-substituted phthalimides, dictated by steric and electronic factors, but not for m-substituted phthalimides. The initial aldol adduct is prone to elimination, giving 2,3-dihydro-5H-pyrrolo[2,1-a]isoindol-5-ones, and the initial cyclisation can be conducted in such a way that aldol cyclisation-elimination is achievable in a one-pot approach. The 2,3-dihydro-5H-pyrrolo[2,1-a]isoindol-5-ones possess cross conjugation and steric effects which significantly influence the reactivity of several functional groups, but conditions suitable for epoxidation, ester hydrolysis and amide formation, and reduction, which provide for ring manipulation, were identified. Many of the derived lactam systems, and especially the eliminated systems, show low solubility, which compromises biological activity, although in some cases, antibacterial and cytotoxic activity was found, and this new class of small molecule provides a useful skeleton for further elaboration and study.
- Open Access
- 2 September 2022
- Published by American Chemical Society (ACS) in The Journal of Organic Chemistry
- Vol. 87 (18) , 12240-12249
Tetramate Derivatives by Chemoselective Dieckmann Ring Closure of threo-Phenylserines and Their Antibacterial Activity
A general route, which provides direct access to substituted bicyclic tetramates, making use of Dieckmann cyclization of oxazolidines derived from threo-arylserines, is reported; the latter were found to be available by an efficient aldol-like reaction of glycine with some substituted benzaldehydes under alkaline conditions. The tetramates were found to release chelated metal cations acquired during chromatographic purification by mild acid wash. Some compounds in the library showed good antibacterial activity against Gram-positive bacteria. Cheminformatic analysis demonstrates that the most active compounds were Ro5-compliant and occupy a narrow region of chemical space, distinct from that occupied by other known antibiotics, with the most potent compounds having 399 < Mw < 530 Da; 3.5 < cLogP < 6.6; 594 < MSA 2; 9.6 < rel. PSA <13.3%. MIC values were shifted to higher concentrations when tested in the presence of HSA or blood, but was not completely abolished, consistent with a plasma protein binding (PPB) effect.
- 2 September 2022
- Published by American Chemical Society (ACS) in The Journal of Organic Chemistry
- Vol. 87 (18) , 12240-12249
Open AccessTetramate Derivatives by Chemoselective Dieckmann Ring Closure of threo-Phenylserines and Their Antibacterial Activity
A general route, which provides direct access to substituted bicyclic tetramates, making use of Dieckmann cyclization of oxazolidines derived from threo-arylserines, is reported; the latter were found to be available by an efficient aldol-like reaction of glycine with some substituted benzaldehydes under alkaline conditions. The tetramates were found to release chelated metal cations acquired during chromatographic purification by mild acid wash. Some compounds in the library showed good antibacterial activity against Gram-positive bacteria. Cheminformatic analysis demonstrates that the most active compounds were Ro5-compliant and occupy a narrow region of chemical space, distinct from that occupied by other known antibiotics, with the most potent compounds having 399 < Mw < 530 Da; 3.5 < cLogP < 6.6; 594 < MSA 2; 9.6 < rel. PSA <13.3%. MIC values were shifted to higher concentrations when tested in the presence of HSA or blood, but was not completely abolished, consistent with a plasma protein binding (PPB) effect.