Isabel W. C. E. Arends
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Previous Organizations / Institutes
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Isabel W. C. E. Arends has a total of 343 co-authors. Here are the top co-authors by number of shared publications:
- Frank Hollmann
Department of Biotechnology Delft University of Technology Delft the Netherlands
43 shared publications Roger A. Sheldon
42 shared publications- Roger Arthur Sheldon
University of the Witwatersrand
15 shared publications Ulf Hanefeld
Technische Universiteit Delft, Afdeling Biotechnologie, Gebouw voor Scheikunde, Julianalaan 136, 2628 BL Delft, The Netherlands
15 shared publications- Ulf Hanefeld
Technische Universiteit Delft Van der Maasweg 9
13 shared publications - Thomas Maschmeyer
Laboratory of Advanced Catalysis for Sustainability, School of Chemistry, The University of Sydney, Sydney, Australia
12 shared publications
Latest Publications
- Open Access
Laccase Did It again: A Scalable and Clean Regeneration System for NAD+ and Its Application in the Synthesis of 12-oxo-Hydroxysteroids
The specific oxidation of 12α-OH group of hydroxysteroids is required for the preparation of cheno- and ursodeoxycholic acid (CDCA and UDCA, respectively). The C12 oxidation of hydroxysteroids into their 12-oxo derivatives can selectively be performed by employing 12α-hydroxysteroid dehydrogenases. These enzymes use NAD(P)+ as an electron acceptor, which has to be re-oxidized in a so-called “regeneration system”. Recently, the enzyme NAD(P)H oxidase (NOX) was applied for the regeneration of NAD+ in the enzymatic preparation of 12-oxo-CDCA from cholic acid (CA), which allows air to be used as an oxidant. However, the NOX system suffers from low activity and low stability. Moreover, the substrate loading is limited to 10 mM. In this study, the laccase/mediator system was investigated as a possible alternative to NOX, employing air as an oxidant. The laccase/mediator system shows higher productivity and scalability than the NOX system. This was proven with a preparative biotransformation of 20 g of CA into 12-oxo-CDCA (92% isolated yield) by employing a substrate loading of 120 mM (corresponding to 50 g/L). Additionally, the performance of the laccase/mediator system was compared with a classical ADH/acetone regeneration system and with other regeneration systems reported in literature.
Open AccessLaccase Did It again: A Scalable and Clean Regeneration System for NAD+ and Its Application in the Synthesis of 12-oxo-Hydroxysteroids
The specific oxidation of 12α-OH group of hydroxysteroids is required for the preparation of cheno- and ursodeoxycholic acid (CDCA and UDCA, respectively). The C12 oxidation of hydroxysteroids into their 12-oxo derivatives can selectively be performed by employing 12α-hydroxysteroid dehydrogenases. These enzymes use NAD(P)+ as an electron acceptor, which has to be re-oxidized in a so-called “regeneration system”. Recently, the enzyme NAD(P)H oxidase (NOX) was applied for the regeneration of NAD+ in the enzymatic preparation of 12-oxo-CDCA from cholic acid (CA), which allows air to be used as an oxidant. However, the NOX system suffers from low activity and low stability. Moreover, the substrate loading is limited to 10 mM. In this study, the laccase/mediator system was investigated as a possible alternative to NOX, employing air as an oxidant. The laccase/mediator system shows higher productivity and scalability than the NOX system. This was proven with a preparative biotransformation of 20 g of CA into 12-oxo-CDCA (92% isolated yield) by employing a substrate loading of 120 mM (corresponding to 50 g/L). Additionally, the performance of the laccase/mediator system was compared with a classical ADH/acetone regeneration system and with other regeneration systems reported in literature.
- Open Access
- 31 January 2020
- Published by American Chemical Society (ACS) in ACS Sustainable Chemistry & Engineering
- Vol. 8 (7) , 2602-2607
Chemoenzymatic Halocyclization of 4-Pentenoic Acid at Preparative Scale
The scale-up of the chemoenzymatic bromolactonization to 100 g-scale is presented together with an identification of current limitations. The preparative-scale reaction also allowed for meaningful mass balances identifying current bottlenecks of the chemoenzymatic reaction.
- 31 January 2020
- Published by American Chemical Society (ACS) in ACS Sustainable Chemistry & Engineering
- Vol. 8 (7) , 2602-2607
Open AccessChemoenzymatic Halocyclization of 4-Pentenoic Acid at Preparative Scale
The scale-up of the chemoenzymatic bromolactonization to 100 g-scale is presented together with an identification of current limitations. The preparative-scale reaction also allowed for meaningful mass balances identifying current bottlenecks of the chemoenzymatic reaction.
- Open Access
- 22 January 2020
- Published by Wiley in ChemCatChem
- Vol. 12 (12) , 3186-3189
Selective Oxyfunctionalisation Reactions Driven by Sulfite Oxidase‐Catalysed In Situ Generation of H2O2
H2O2 can be accepted by several peroxygenases as a clean oxidant, able to supply both the necessary electrons and oxygen atom at the same time. The biocatalysts, in turn, are able to catalyse an array of interesting oxygen insertion reactions at enantio‐ and regio‐selectivities hard to attain with classical chemical methods. The sensitivity of most peroxygenases towards H2O2, however, requires this oxidant to be generated in situ. Here, we suggest the application of (modified) sulfite oxidases to couple the oxidation of sulfites to the reduction of oxygen. This enables us to use calcium sulfite, an industrial waste product from scrubbing flue gases, as an electron donor to reduce oxygen. This will supply the required peroxide in a controlled manner and enables us to perform these challenging reactions at the expense of simple salts.
- 22 January 2020
- Published by Wiley in ChemCatChem
- Vol. 12 (12) , 3186-3189
Open AccessSelective Oxyfunctionalisation Reactions Driven by Sulfite Oxidase‐Catalysed In Situ Generation of H2O2
H2O2 can be accepted by several peroxygenases as a clean oxidant, able to supply both the necessary electrons and oxygen atom at the same time. The biocatalysts, in turn, are able to catalyse an array of interesting oxygen insertion reactions at enantio‐ and regio‐selectivities hard to attain with classical chemical methods. The sensitivity of most peroxygenases towards H2O2, however, requires this oxidant to be generated in situ. Here, we suggest the application of (modified) sulfite oxidases to couple the oxidation of sulfites to the reduction of oxygen. This enables us to use calcium sulfite, an industrial waste product from scrubbing flue gases, as an electron donor to reduce oxygen. This will supply the required peroxide in a controlled manner and enables us to perform these challenging reactions at the expense of simple salts.
- Open Access
- 1 January 2020
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
- Vol. 1868 (1) , 140303
Photochemical regeneration of flavoenzymes – An Old Yellow Enzyme case-study
- 1 January 2020
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
- Vol. 1868 (1) , 140303
Open AccessPhotochemical regeneration of flavoenzymes – An Old Yellow Enzyme case-study
- Open Access
- 12 November 2019
- Published by Wiley in ChemBioChem
- Vol. 21 (8) , 1112-1115
Metals in Biotechnology: Cr‐Driven Stereoselective Reduction of Conjugated C=C Double Bonds
Elemental metals are shown to be suitable sacrificial electron donors to drive the stereoselective reduction of conjugated C=C double bonds using Old Yellow Enzymes as catalysts. Both direct electron transfer from the metal to the enzyme as well as mediated electron transfer is feasible, although the latter excels by higher reaction rates. The general applicability of this new chemoenzymatic reduction method is demonstrated, and current limitations are outlined.
- 12 November 2019
- Published by Wiley in ChemBioChem
- Vol. 21 (8) , 1112-1115
Open AccessMetals in Biotechnology: Cr‐Driven Stereoselective Reduction of Conjugated C=C Double Bonds
Elemental metals are shown to be suitable sacrificial electron donors to drive the stereoselective reduction of conjugated C=C double bonds using Old Yellow Enzymes as catalysts. Both direct electron transfer from the metal to the enzyme as well as mediated electron transfer is feasible, although the latter excels by higher reaction rates. The general applicability of this new chemoenzymatic reduction method is demonstrated, and current limitations are outlined.
- Open Access
- 19 July 2019
- Published by Wiley in ChemCatChem
- Vol. 11 (18) , 4519-4523
Peroxygenase‐Catalysed Epoxidation of Styrene Derivatives in Neat Reaction Media
Biocatalytic oxyfunctionalisation reactions are traditionally conducted in aqueous media limiting their production yield. Here we report the application of a peroxygenase in neat reaction conditions reaching product concentrations of up to 360 mM.
- 19 July 2019
- Published by Wiley in ChemCatChem
- Vol. 11 (18) , 4519-4523
Open AccessPeroxygenase‐Catalysed Epoxidation of Styrene Derivatives in Neat Reaction Media
Biocatalytic oxyfunctionalisation reactions are traditionally conducted in aqueous media limiting their production yield. Here we report the application of a peroxygenase in neat reaction conditions reaching product concentrations of up to 360 mM.
- Open Access
- 9 July 2019
- Published by American Chemical Society (ACS) in ACS Catalysis
- Vol. 9 (8) , 7409-7417
Cascading g-C3N4 and Peroxygenases for Selective Oxyfunctionalization Reactions
Peroxygenases are very interesting catalysts for specific oxyfunctionalization chemistry. Instead of relying on complicated electron transport chains, they rely on simple hydrogen peroxide as stoichiometric oxidant. Their poor robustness against H2O2 can be addressed via in situ generation of H2O2. Here we report that simple graphitic carbon nitride (g-C3N4) is a promising photocatalyst to drive peroxygenase-catalyzed hydroxylation reactions. The system has been characterized outlining its scope but also its current limitations. In particular, spatial separation of the photocatalyst from the enzyme is shown as solution to circumvent the undesired inactivation of the biocatalyst. Overall, very promising turnover numbers of the biocatalyst of more than 60.000 have been achieved.
- 9 July 2019
- Published by American Chemical Society (ACS) in ACS Catalysis
- Vol. 9 (8) , 7409-7417
Open AccessCascading g-C3N4 and Peroxygenases for Selective Oxyfunctionalization Reactions
Peroxygenases are very interesting catalysts for specific oxyfunctionalization chemistry. Instead of relying on complicated electron transport chains, they rely on simple hydrogen peroxide as stoichiometric oxidant. Their poor robustness against H2O2 can be addressed via in situ generation of H2O2. Here we report that simple graphitic carbon nitride (g-C3N4) is a promising photocatalyst to drive peroxygenase-catalyzed hydroxylation reactions. The system has been characterized outlining its scope but also its current limitations. In particular, spatial separation of the photocatalyst from the enzyme is shown as solution to circumvent the undesired inactivation of the biocatalyst. Overall, very promising turnover numbers of the biocatalyst of more than 60.000 have been achieved.
- Open Access
- 1 April 2019
- Published by Wiley in Advanced Synthesis & Catalysis
- Vol. 361 (11) , 2448-2455
Clean Enzymatic Oxidation of 12α‐Hydroxysteroids to 12‐Oxo‐Derivatives Catalyzed by Hydroxysteroid Dehydrogenase
The C12 specific oxidation of hydroxysteroids is an essential reaction required for the preparation of pharmaceutical ingredients like ursodeoxycholic acid (UDCA) and chenodeoxycholic acid (CDCA), which can be synthesized by Wolff‐Kishner reduction of the obtained 12‐oxo‐hydroxysteroids. 12α‐hydroxysteroid dehydrogenases (12α‐HSDHs) have been shown to perform this reaction with high yields, under mild conditions and without the need of protection and deprotection steps, required in chemical synthesis. Here, the recombinant expression and biochemical characterization of the nicotinamide adenine dinucleotide (NAD+)‐dependent HSDH from Eggerthella lenta (El12α‐HSDH) are reported. This enzyme shows comparable properties with the well‐known nicotinamide adenine dinucleotide phosphate (NADP+)‐dependent enzyme from Clostridium sp. 48–50. In order to perform a viable and atom efficient enzymatic hydroxysteroid oxidation, NAD(P)H oxidase (NOX) was employed as cofactor regeneration system: NOX uses oxygen (O2) as sacrificial substrate and produces only water as side product. 10 mM of cholic acid was fully and selectively converted to 12‐oxo‐CDCA in 24 h. The possibility to employ this system on UCA and 7‐oxo‐deoxycholic acid (7‐oxo‐DCA) as substrates was additionally investigated. The performance of the El12α‐HSDH was evaluated also in combination with a “classical” regeneration system (oxaloacetate/malate dehydrogenase) showing full conversion in 4 h. Finally, the feasibility of a catalytic aerobic‐NAD+‐dependent enzymatic oxidation was shown on a preparative scale (oxidation of CA to 12‐oxo‐CDCA) employing the El12α‐HSDH‐NOX system in a segmented‐flow‐reactor. magnified image
- 1 April 2019
- Published by Wiley in Advanced Synthesis & Catalysis
- Vol. 361 (11) , 2448-2455
Open AccessClean Enzymatic Oxidation of 12α‐Hydroxysteroids to 12‐Oxo‐Derivatives Catalyzed by Hydroxysteroid Dehydrogenase
The C12 specific oxidation of hydroxysteroids is an essential reaction required for the preparation of pharmaceutical ingredients like ursodeoxycholic acid (UDCA) and chenodeoxycholic acid (CDCA), which can be synthesized by Wolff‐Kishner reduction of the obtained 12‐oxo‐hydroxysteroids. 12α‐hydroxysteroid dehydrogenases (12α‐HSDHs) have been shown to perform this reaction with high yields, under mild conditions and without the need of protection and deprotection steps, required in chemical synthesis. Here, the recombinant expression and biochemical characterization of the nicotinamide adenine dinucleotide (NAD+)‐dependent HSDH from Eggerthella lenta (El12α‐HSDH) are reported. This enzyme shows comparable properties with the well‐known nicotinamide adenine dinucleotide phosphate (NADP+)‐dependent enzyme from Clostridium sp. 48–50. In order to perform a viable and atom efficient enzymatic hydroxysteroid oxidation, NAD(P)H oxidase (NOX) was employed as cofactor regeneration system: NOX uses oxygen (O2) as sacrificial substrate and produces only water as side product. 10 mM of cholic acid was fully and selectively converted to 12‐oxo‐CDCA in 24 h. The possibility to employ this system on UCA and 7‐oxo‐deoxycholic acid (7‐oxo‐DCA) as substrates was additionally investigated. The performance of the El12α‐HSDH was evaluated also in combination with a “classical” regeneration system (oxaloacetate/malate dehydrogenase) showing full conversion in 4 h. Finally, the feasibility of a catalytic aerobic‐NAD+‐dependent enzymatic oxidation was shown on a preparative scale (oxidation of CA to 12‐oxo‐CDCA) employing the El12α‐HSDH‐NOX system in a segmented‐flow‐reactor. magnified image
- Open Access
A Photo-Enzymatic Cascade to Transform Racemic Alcohols into Enantiomerically Pure Amines
The consecutive photooxidation and reductive amination of various alcohols in a cascade reaction were realized by the combination of a photocatalyst and several enzymes. Whereas the photocatalyst (sodium anthraquinone-2-sulfonate) mediated the light-driven, aerobic oxidation of primary and secondary alcohols, the enzymes (various ω-transaminases) catalyzed the enantio-specific reductive amination of the intermediate aldehydes and ketones. The system worked in a one-pot one-step fashion, whereas the productivity was significantly improved by switching to a one-pot two-step procedure. A wide range of aliphatic and aromatic compounds was transformed into the enantiomerically pure corresponding amines via the photo-enzymatic cascade.
Open AccessA Photo-Enzymatic Cascade to Transform Racemic Alcohols into Enantiomerically Pure Amines
The consecutive photooxidation and reductive amination of various alcohols in a cascade reaction were realized by the combination of a photocatalyst and several enzymes. Whereas the photocatalyst (sodium anthraquinone-2-sulfonate) mediated the light-driven, aerobic oxidation of primary and secondary alcohols, the enzymes (various ω-transaminases) catalyzed the enantio-specific reductive amination of the intermediate aldehydes and ketones. The system worked in a one-pot one-step fashion, whereas the productivity was significantly improved by switching to a one-pot two-step procedure. A wide range of aliphatic and aromatic compounds was transformed into the enantiomerically pure corresponding amines via the photo-enzymatic cascade.
- Open Access
- 22 January 2019
- Published by Royal Society of Chemistry (RSC) in Chemical Communications
- Vol. 55 (12) , 1790-1792
Photoenzymatic epoxidation of styrenes
Two-component-diffusible-flavomonooxygenases are versatile biocatalysts for selective epoxidation-, hydroxylation- or halogenation reactions. Their complicated molecular architecture can be simplified using photochemical regeneration of the catalytically active, reduced FADH2 prosthetic group. In this contribution we provide the proof-of-concept and characterization for the direct regeneration of the styrene monooxygenase from Pseudomonas.
- 22 January 2019
- Published by Royal Society of Chemistry (RSC) in Chemical Communications
- Vol. 55 (12) , 1790-1792
Open AccessPhotoenzymatic epoxidation of styrenes
Two-component-diffusible-flavomonooxygenases are versatile biocatalysts for selective epoxidation-, hydroxylation- or halogenation reactions. Their complicated molecular architecture can be simplified using photochemical regeneration of the catalytically active, reduced FADH2 prosthetic group. In this contribution we provide the proof-of-concept and characterization for the direct regeneration of the styrene monooxygenase from Pseudomonas.