John E. Kelly
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
John E. Kelly has a total of 25 co-authors. Here are the top co-authors by number of shared publications:
- Carter Tribley Butts
Departments of Sociology, University of California Irvine, Irvine, CA, USA
3 shared publications - Christine Chrissian
The City College of New York and CUNY Institute for Macromolecular Assemblies
3 shared publications - Rachel W. Martin
Department of Chemistry, University of California, Irvine, Irvine, United States of America
3 shared publications - Ruth E. Stark
Department of Chemistry and Biochemistry The City College of New York (CCNY), City University of New York (CUNY), Institute for Macromolecular Assemblies New York New York USA
3 shared publications - Arturo Casadevall
Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University
2 shared publications - Emma Camacho
Johns Hopkins University
2 shared publications
Latest Publications
- Open Access
- 1 October 2020
- Published by Elsevier in Journal of Biological Chemistry
- Vol. 295 (44) , 15083-15096
Solid-state NMR spectroscopy identifies three classes of lipids in Cryptococcus neoformans melanized cell walls and whole fungal cells
- 1 October 2020
- Published by Elsevier in Journal of Biological Chemistry
- Vol. 295 (44) , 15083-15096
Open AccessSolid-state NMR spectroscopy identifies three classes of lipids in Cryptococcus neoformans melanized cell walls and whole fungal cells
- 27 August 2020
- Published by Elsevier in Solid State Nuclear Magnetic Resonance
- Vol. 109, 101686
Tailoring NMR experiments for structural characterization of amorphous biological solids: A practical guide
- 27 August 2020
- Published by Elsevier in Solid State Nuclear Magnetic Resonance
- Vol. 109, 101686
Tailoring NMR experiments for structural characterization of amorphous biological solids: A practical guide
- Open Access
- 17 July 2020
- Published by MDPI AG in Biomolecules
- Vol. 10 (7) , 1069
The Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensis
The Droserasins, aspartic proteases from the carnivorous plant Drosera capensis, contain a 100-residue plant-specific insert (PSI) that is post-translationally cleaved and independently acts as an antimicrobial peptide. PSIs are of interest not only for their inhibition of microbial growth, but also because they modify the size of lipid vesicles and strongly interact with biological membranes. PSIs may therefore be useful for modulating lipid systems in NMR studies of membrane proteins. Here we present the expression and biophysical characterization of the Droserasin 1 PSI (D1 PSI.) This peptide is monomeric in solution and maintains its primarily -helical secondary structure over a wide range of temperatures and pH values, even under conditions where its three disulfide bonds are reduced. Vesicle fusion assays indicate that the D1 PSI strongly interacts with bacterial and fungal lipids at pH 5 and lower, consistent with the physiological pH of D. capensis mucilage. It binds lipids with a variety of head groups, highlighting its versatility as a potential stabilizer for lipid nanodiscs. Solid-state NMR spectra collected at a field strength of 36 T, using a unique series-connected hybrid magnet, indicate that the peptide is folded and strongly bound to the membrane. Molecular dynamics simulations indicate that the peptide is stable as either a monomer or a dimer in a lipid bilayer. Both the monomer and the dimer allow the passage of water through the membrane, albeit at different rates.- 17 July 2020
- Published by MDPI AG in Biomolecules
- Vol. 10 (7) , 1069
Open AccessThe Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensis
The Droserasins, aspartic proteases from the carnivorous plant Drosera capensis, contain a 100-residue plant-specific insert (PSI) that is post-translationally cleaved and independently acts as an antimicrobial peptide. PSIs are of interest not only for their inhibition of microbial growth, but also because they modify the size of lipid vesicles and strongly interact with biological membranes. PSIs may therefore be useful for modulating lipid systems in NMR studies of membrane proteins. Here we present the expression and biophysical characterization of the Droserasin 1 PSI (D1 PSI.) This peptide is monomeric in solution and maintains its primarily -helical secondary structure over a wide range of temperatures and pH values, even under conditions where its three disulfide bonds are reduced. Vesicle fusion assays indicate that the D1 PSI strongly interacts with bacterial and fungal lipids at pH 5 and lower, consistent with the physiological pH of D. capensis mucilage. It binds lipids with a variety of head groups, highlighting its versatility as a potential stabilizer for lipid nanodiscs. Solid-state NMR spectra collected at a field strength of 36 T, using a unique series-connected hybrid magnet, indicate that the peptide is folded and strongly bound to the membrane. Molecular dynamics simulations indicate that the peptide is stable as either a monomer or a dimer in a lipid bilayer. Both the monomer and the dimer allow the passage of water through the membrane, albeit at different rates. - Open Access
Solid-state NMR spectroscopy identifies three classes of lipids in C. neoformans melanized cell walls and whole fungal cells
A primary virulence-associated trait of the opportunistic fungal pathogen Cryptococcus neoformans is the production of melanin pigments that are deposited into the cell wall and interfere with the host immune response. Previously, our solid-state NMR studies of isolated melanized cell walls (melanin ‘ghosts’) revealed that the pigments are strongly associated with lipids, but their identities, origins, and potential roles were undetermined. Herein, we exploited spectral editing techniques to identify and quantify the lipid molecules associated with pigments in melanin ghosts. The lipid profiles were remarkably similar in whole C. neoformans cells, grown under either melanizing or non-melanizing conditions; triglycerides (TGs), sterol esters (SEs) and polyisoprenoids (PPs) were the major constituents. Although no quantitative differences were found between melanized and non-melanized cells, melanin ghosts were relatively enriched in SEs and PPs. In contrast to lipid structures reported during early stages of fungal growth in nutrient-rich media, variants found herein could be linked to nutrient stress, cell aging, and subsequent production of substances that promote chronic fungal infections. The fact that TGs and SEs are the typical cargo of lipid droplets suggests that these organelles could be connected to C. neoformans melanin synthesis. Moreover, the discovery of PPs is intriguing because dolichol is a well-established constituent of human neuromelanin. The presence of these lipid species even in non-melanized cells suggests that they could be produced constitutively under stress conditions in anticipation of melanin synthesis. These findings demonstrate that C. neoformans lipids are more varied compositionally and functionally than previously recognized.
Open AccessSolid-state NMR spectroscopy identifies three classes of lipids in C. neoformans melanized cell walls and whole fungal cells
A primary virulence-associated trait of the opportunistic fungal pathogen Cryptococcus neoformans is the production of melanin pigments that are deposited into the cell wall and interfere with the host immune response. Previously, our solid-state NMR studies of isolated melanized cell walls (melanin ‘ghosts’) revealed that the pigments are strongly associated with lipids, but their identities, origins, and potential roles were undetermined. Herein, we exploited spectral editing techniques to identify and quantify the lipid molecules associated with pigments in melanin ghosts. The lipid profiles were remarkably similar in whole C. neoformans cells, grown under either melanizing or non-melanizing conditions; triglycerides (TGs), sterol esters (SEs) and polyisoprenoids (PPs) were the major constituents. Although no quantitative differences were found between melanized and non-melanized cells, melanin ghosts were relatively enriched in SEs and PPs. In contrast to lipid structures reported during early stages of fungal growth in nutrient-rich media, variants found herein could be linked to nutrient stress, cell aging, and subsequent production of substances that promote chronic fungal infections. The fact that TGs and SEs are the typical cargo of lipid droplets suggests that these organelles could be connected to C. neoformans melanin synthesis. Moreover, the discovery of PPs is intriguing because dolichol is a well-established constituent of human neuromelanin. The presence of these lipid species even in non-melanized cells suggests that they could be produced constitutively under stress conditions in anticipation of melanin synthesis. These findings demonstrate that C. neoformans lipids are more varied compositionally and functionally than previously recognized.
- 31 December 2019
- Published by JSTOR
- p. 178-207
The Allure of Cahokia as a Sacred Place in the Eleventh Century
- 31 December 2019
- Published by JSTOR
- p. 178-207
The Allure of Cahokia as a Sacred Place in the Eleventh Century
- Open Access
- 19 December 2018
- Published by Oxford University Press (OUP) in Integrative Biology
- Vol. 10 (12) , 768-779
Protein structure networks provide insight into active site flexibility in esterase/lipases from the carnivorous plantDrosera capensis
In plants, esterase/lipases perform transesterification reactions, playing an important role in the synthesis of useful molecules, such as those comprising the waxy coatings of leaf surfaces.
- 19 December 2018
- Published by Oxford University Press (OUP) in Integrative Biology
- Vol. 10 (12) , 768-779
Open AccessProtein structure networks provide insight into active site flexibility in esterase/lipases from the carnivorous plantDrosera capensis
In plants, esterase/lipases perform transesterification reactions, playing an important role in the synthesis of useful molecules, such as those comprising the waxy coatings of leaf surfaces.
- 1 March 2017
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - General Subjects
- Vol. 1861 (3) , 636-643
Structure prediction and network analysis of chitinases from the Cape sundew, Drosera capensis
- 1 March 2017
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - General Subjects
- Vol. 1861 (3) , 636-643
Structure prediction and network analysis of chitinases from the Cape sundew, Drosera capensis
- 15 September 2009
- Published by JSTOR
- p. 134-161
Woodland Period Archaeology in the American Bottom