Da-Song Yang
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Da-Song Yang has a total of 88 co-authors. Here are the top co-authors by number of shared publications:
Yong-Ping Yang
Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China; Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China; Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China
10 shared publicationsKe-Chun Liu
Biology Institute of Shandong Academy of Sciences, Jinan 250014, PR China
9 shared publications- Xiao-Li Li
Key Laboratory of Economic Plants and Biotechnology; Germplasm Bank of Wild Species in Southwest China; Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China
9 shared publications Wei-Bing Peng
Biology Institute of Shandong Academy of Sciences, Jinan 250014, PR China
8 shared publicationsZi-Lei Li
Key Laboratory of Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China; Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China; Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, PR China
6 shared publications- Bin Di
China Pharmaceutical University
5 shared publications
Latest Publications
- Open Access
- 25 March 2026
- Published by MDPI AG in Journal of Fungi
- Vol. 12 (4) , 236
Genome and Secondary Metabolites Analysis of Fusarium oxysporum BPF55 Associated with Blaps rynchopetera and Its Anti-MRSA Biofilm Potential
Antimicrobial resistance (AMR) represents a critical global health challenge, with methicillin-resistant Staphylococcus aureus (MRSA) posing a significant threat in both hospital-acquired and community-associated infections. Research has demonstrated that biofilm formation is a key factor contributing to drug resistance in MRSA. In this study, we investigated an fungus, Fusarium oxysporum BPF55, isolated from Blaps rynchopetera, which inhibits MRSA biofilm formation. The aim of this research was to identify the fungal strain and comprehensively characterize its genomic features, as well as to evaluate its anti-MRSA biofilm potential. Whole-genome sequencing revealed a genome size of 50,097,681 base pairs, a GC content of 47.36%, and 16,507 predicted coding genes. AntiSMASH analysis identified 56 secondary metabolite biosynthetic gene clusters, including those involved in the synthesis of various natural products such as terpenes, non-ribosomal peptides, and polyketides. Using UPLC-MS/MS, 15 compounds were annotated from the ethyl acetate extract. Molecular docking studies demonstrated that four compounds exhibit varying affinities for SarA and AgrA, two key proteins involved in MRSA biofilm formation. Overall, these findings suggest that the fungus F. oxysporum BPA55 produces a variety of secondary metabolites and contains bioactive compounds with potential anti-MRSA biofilm activity.
- 25 March 2026
- Published by MDPI AG in Journal of Fungi
- Vol. 12 (4) , 236
Open AccessGenome and Secondary Metabolites Analysis of Fusarium oxysporum BPF55 Associated with Blaps rynchopetera and Its Anti-MRSA Biofilm Potential
Antimicrobial resistance (AMR) represents a critical global health challenge, with methicillin-resistant Staphylococcus aureus (MRSA) posing a significant threat in both hospital-acquired and community-associated infections. Research has demonstrated that biofilm formation is a key factor contributing to drug resistance in MRSA. In this study, we investigated an fungus, Fusarium oxysporum BPF55, isolated from Blaps rynchopetera, which inhibits MRSA biofilm formation. The aim of this research was to identify the fungal strain and comprehensively characterize its genomic features, as well as to evaluate its anti-MRSA biofilm potential. Whole-genome sequencing revealed a genome size of 50,097,681 base pairs, a GC content of 47.36%, and 16,507 predicted coding genes. AntiSMASH analysis identified 56 secondary metabolite biosynthetic gene clusters, including those involved in the synthesis of various natural products such as terpenes, non-ribosomal peptides, and polyketides. Using UPLC-MS/MS, 15 compounds were annotated from the ethyl acetate extract. Molecular docking studies demonstrated that four compounds exhibit varying affinities for SarA and AgrA, two key proteins involved in MRSA biofilm formation. Overall, these findings suggest that the fungus F. oxysporum BPA55 produces a variety of secondary metabolites and contains bioactive compounds with potential anti-MRSA biofilm activity.
- Open Access
- 11 March 2024
- Published by Frontiers Media SA in Frontiers in Microbiology
- Vol. 15, 1288051
Shotgun metagenomics reveals the gut microbial diversity and functions in Vespa mandarinia (Hymenoptera: Vespidae) at multiple life stages
Wasps play important roles as predators and pollinators in the ecosystem. The Jingpo minority residing in Yunnan Province, China, has a traditional practice of using wine infused with mature wasps as a customary remedy for managing rheumatoid arthritis. The larva of the wasp is also a tasteful folk dish that has created a tremendous market. There is a paucity of survival knowledge, which has greatly restricted their potential applications in food and healthcare. Recent research has highlighted the importance of gut microbiota in insect growth. Nevertheless, there is still a lack of understanding regarding the composition, changes, and functions of the gut microbiota in Vespa mandarinia during development. In this research, the gut microbiota were investigated across three growth stages of Vespa mandarinia using a metagenomic technology. The result revealed that there are significant variations in the proportion of main gut microbes during the metamorphosis of Vespa mandarinia. Tenericutes were found to dominate during the larval stage, while Proteobacteria emerged as the dominant group post-pupation. Through a comprehensive analysis of the gut microbiota metagenome, this study revealed functional differences in the wasp gut microbiota at various growth stages. During the larval stage, the gut microbiota plays a central role in promoting metabolism. Following pupation, the gut microbiota exhibited diversified functions, likely due to the complex environments and diverse food sources encountered after metamorphosis. These functions included amino acid metabolism, compound degradation, and defense mechanisms. This research provides an extensive dataset on the gut microbiota during the metamorphosis of Vespa mandarinia, contributing to a deeper understanding of the influence of gut microbiota on wasp growth. Furthermore, this study uncovers a unique microbial treasure within insect guts, which is important for advancing the application of wasps in the fields of food and medicine.
- 11 March 2024
- Published by Frontiers Media SA in Frontiers in Microbiology
- Vol. 15, 1288051
Open AccessShotgun metagenomics reveals the gut microbial diversity and functions in Vespa mandarinia (Hymenoptera: Vespidae) at multiple life stages
Wasps play important roles as predators and pollinators in the ecosystem. The Jingpo minority residing in Yunnan Province, China, has a traditional practice of using wine infused with mature wasps as a customary remedy for managing rheumatoid arthritis. The larva of the wasp is also a tasteful folk dish that has created a tremendous market. There is a paucity of survival knowledge, which has greatly restricted their potential applications in food and healthcare. Recent research has highlighted the importance of gut microbiota in insect growth. Nevertheless, there is still a lack of understanding regarding the composition, changes, and functions of the gut microbiota in Vespa mandarinia during development. In this research, the gut microbiota were investigated across three growth stages of Vespa mandarinia using a metagenomic technology. The result revealed that there are significant variations in the proportion of main gut microbes during the metamorphosis of Vespa mandarinia. Tenericutes were found to dominate during the larval stage, while Proteobacteria emerged as the dominant group post-pupation. Through a comprehensive analysis of the gut microbiota metagenome, this study revealed functional differences in the wasp gut microbiota at various growth stages. During the larval stage, the gut microbiota plays a central role in promoting metabolism. Following pupation, the gut microbiota exhibited diversified functions, likely due to the complex environments and diverse food sources encountered after metamorphosis. These functions included amino acid metabolism, compound degradation, and defense mechanisms. This research provides an extensive dataset on the gut microbiota during the metamorphosis of Vespa mandarinia, contributing to a deeper understanding of the influence of gut microbiota on wasp growth. Furthermore, this study uncovers a unique microbial treasure within insect guts, which is important for advancing the application of wasps in the fields of food and medicine.
- Open Access
The Regulating Effect of CII-3 and Its Active Components from Periplaneta americana on M1/M2 Macrophage Polarization
CII-3 is the effective part of Periplaneta americana for application in oncotherapy. This study investigated its main chemical components for macrophage polarization regulation activity. Compounds were separated and purified, and their structures were elucidated based on NMR and HR-ESI-MS analyses. After inducing the M1 and M2 phenotype macrophages, CII-3 and testing components were added and co-incubated to evaluate their effects on the relevant markers of macrophages. Then, gradient concentrations of CII-3 and active monomers were further investigated for their effects on M2 macrophages. The effects were detected by RT-PCR, ELISA, flow cytometry, and immunofluorescence. Twelve compounds were identified from CII-3. CII-3 and pericanaside (5) had no obvious effect on M1 macrophages, while they significantly reduced the expression levels of M2 macrophage markers. Specifically, they significantly reduced the levels of TGF-β and IL-10 and the mRNA expression levels of ARG-1 and CD206 in the M2 phenotypes of RAW264.7 and Ana-1 macrophages. The conditioned medium of CII-3 and pericanaside (5) could inhibit the migration capacity of CT26.WT tumor cells. Macrophage M1/M2 polarization is a dynamic equilibrium, and the M2 phenotype, which can promote the growth of tumor cells, is relatively highly expressed in the tumor microenvironment. CII-3 and pericanaside could significantly reduce the phenotype of M2-type macrophages, indicating that the anti-tumor activity of CII-3 could be related to the inhibitory effect on M2 polarization, and pericanaside was one of the active components.
Open AccessThe Regulating Effect of CII-3 and Its Active Components from Periplaneta americana on M1/M2 Macrophage Polarization
CII-3 is the effective part of Periplaneta americana for application in oncotherapy. This study investigated its main chemical components for macrophage polarization regulation activity. Compounds were separated and purified, and their structures were elucidated based on NMR and HR-ESI-MS analyses. After inducing the M1 and M2 phenotype macrophages, CII-3 and testing components were added and co-incubated to evaluate their effects on the relevant markers of macrophages. Then, gradient concentrations of CII-3 and active monomers were further investigated for their effects on M2 macrophages. The effects were detected by RT-PCR, ELISA, flow cytometry, and immunofluorescence. Twelve compounds were identified from CII-3. CII-3 and pericanaside (5) had no obvious effect on M1 macrophages, while they significantly reduced the expression levels of M2 macrophage markers. Specifically, they significantly reduced the levels of TGF-β and IL-10 and the mRNA expression levels of ARG-1 and CD206 in the M2 phenotypes of RAW264.7 and Ana-1 macrophages. The conditioned medium of CII-3 and pericanaside (5) could inhibit the migration capacity of CT26.WT tumor cells. Macrophage M1/M2 polarization is a dynamic equilibrium, and the M2 phenotype, which can promote the growth of tumor cells, is relatively highly expressed in the tumor microenvironment. CII-3 and pericanaside could significantly reduce the phenotype of M2-type macrophages, indicating that the anti-tumor activity of CII-3 could be related to the inhibitory effect on M2 polarization, and pericanaside was one of the active components.
- 10 February 2022
- Published by Wiley in Entomological Research
- Vol. 52 (3) , 111-117
Utility of DNA barcoding for identification of common Vespa species (Hymenoptera: Vespidae) from Yunnan, China
As traditional Chinese medicine and edible insects, Vespa hornets have high economic value and huge market demand. Hornet breeding has become an important way to increase the income of mountain farmers in China, but the limitation of traditional identification methods has become the bottleneck of the modern development of hornet resources. In this study, a simple and reliable method for the molecular identification of typical hornets from Yunnan was successfully established. In the NCBI database, DNA sequences of hornet samples were aligned as Vespa analis, Vespa basalis, Vespa velutina, Vespa mandarinia, Vespa magnifica, Vespa binghami, Vespa soror by BLAST search. The efficiency of the PCR amplification of mitochondrial cytochrome C oxidase I (COI) gene sequences in all samples was 100% by using the optimized program. Moreover, a reference database for DNA barcodes of Vespa materials in Yunnan was constructed. This study provided a successful example for the identification of local insects of Yunnan and will be helpful to the development of wasp resources.
- 10 February 2022
- Published by Wiley in Entomological Research
- Vol. 52 (3) , 111-117
Utility of DNA barcoding for identification of common Vespa species (Hymenoptera: Vespidae) from Yunnan, China
As traditional Chinese medicine and edible insects, Vespa hornets have high economic value and huge market demand. Hornet breeding has become an important way to increase the income of mountain farmers in China, but the limitation of traditional identification methods has become the bottleneck of the modern development of hornet resources. In this study, a simple and reliable method for the molecular identification of typical hornets from Yunnan was successfully established. In the NCBI database, DNA sequences of hornet samples were aligned as Vespa analis, Vespa basalis, Vespa velutina, Vespa mandarinia, Vespa magnifica, Vespa binghami, Vespa soror by BLAST search. The efficiency of the PCR amplification of mitochondrial cytochrome C oxidase I (COI) gene sequences in all samples was 100% by using the optimized program. Moreover, a reference database for DNA barcodes of Vespa materials in Yunnan was constructed. This study provided a successful example for the identification of local insects of Yunnan and will be helpful to the development of wasp resources.
- Open Access
Griseaketides A–D, New Aromatic Polyketides from the Pathogenic Fungus Magnaporthe grisea
Magnaporthe grisea is the causal agent of rice blast disease, which is the most serious disease of cultivated rice. Aromatic polyketides are its typical metabolites and are involved in the infection process. In the search for novel lead compounds, chemical investigation of the fungus M. grisea M639 has led to the isolation of four new aromatic polyketides (salicylaldehyde skeleton bearing an unsaturated side chain), griseaketides A–D (1–4), as well as 15 known compounds (5–19). The structures of the new compounds were elucidated on the basis of extensive spectroscopic analyses, including HR-MS, 2D NMR. Compound 12 showed prominent activity that killed 94.5% of C. elegans at 400 ppm and 66.9% at 200 ppm over 24 h. This is the first report describing the nematicidal activity of this type aromatic polyketide.
Open AccessGriseaketides A–D, New Aromatic Polyketides from the Pathogenic Fungus Magnaporthe grisea
Magnaporthe grisea is the causal agent of rice blast disease, which is the most serious disease of cultivated rice. Aromatic polyketides are its typical metabolites and are involved in the infection process. In the search for novel lead compounds, chemical investigation of the fungus M. grisea M639 has led to the isolation of four new aromatic polyketides (salicylaldehyde skeleton bearing an unsaturated side chain), griseaketides A–D (1–4), as well as 15 known compounds (5–19). The structures of the new compounds were elucidated on the basis of extensive spectroscopic analyses, including HR-MS, 2D NMR. Compound 12 showed prominent activity that killed 94.5% of C. elegans at 400 ppm and 66.9% at 200 ppm over 24 h. This is the first report describing the nematicidal activity of this type aromatic polyketide.
- 1 December 2018
- Published by Elsevier in Bioorganic Chemistry
- Vol. 81, 278-288
Identification of novel and selective non-peptide inhibitors targeting the polo-box domain of polo-like kinase 1
- 1 December 2018
- Published by Elsevier in Bioorganic Chemistry
- Vol. 81, 278-288
Identification of novel and selective non-peptide inhibitors targeting the polo-box domain of polo-like kinase 1
- 1 October 2018
- Published by Elsevier in Fitoterapia
- Vol. 130, 17-25
New secondary metabolites from an engineering mutant of endophytic Streptomyces sp. CS
- 1 October 2018
- Published by Elsevier in Fitoterapia
- Vol. 130, 17-25
New secondary metabolites from an engineering mutant of endophytic Streptomyces sp. CS
- 25 June 2018
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 16 (28) , 5097-5101
The discovery of a freezing-induced peptide ligation during the total chemical synthesis of human interferon-ε
The first example of a counterintuitive freezing-induced peptide ligation was discovered during the total synthesis of human interferon-ε (187 amino acids) which blocks HIV infection through unique mechanisms.
- 25 June 2018
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 16 (28) , 5097-5101
The discovery of a freezing-induced peptide ligation during the total chemical synthesis of human interferon-ε
The first example of a counterintuitive freezing-induced peptide ligation was discovered during the total synthesis of human interferon-ε (187 amino acids) which blocks HIV infection through unique mechanisms.
- 1 March 2018
- Published by Elsevier in Phytochemistry
- Vol. 147, 167-183
Phytochemistry and pharmacology of the genus Leonurus: The herb to benefit the mothers and more
- 1 March 2018
- Published by Elsevier in Phytochemistry
- Vol. 147, 167-183
Phytochemistry and pharmacology of the genus Leonurus: The herb to benefit the mothers and more