Athanasios Zavras
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The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
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Athanasios Zavras has a total of 87 co-authors. Here are the top co-authors by number of shared publications:
- Richard A. J. O'HAir
School of Chemistry, University of Melbourne, Parkville, Victoria 3010, Australia
16 shared publications - George Khairallah
School of Chemistry and Bio21 Institute, University of Melbourne, Melbourne, Victoria 3010 (Australia)
15 shared publications Jonathan M. White
School of Chemistry and Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, Victoria 3010, Australia.
6 shared publicationsAlison J. Edwards
Bragg Institute, Australian Nuclear Science and Technology Organization, New Illawarra Road, Lucas Heights, New South Wales 2234, Australia
5 shared publications- Paul Stephen Donnelly
School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Melbourne, Victoria 3010, Australia
5 shared publications Marjan Krstić
4 shared publications
Latest Publications
- Open Access
- 6 June 2016
- Published by Springer Nature in Nature Communications
- Vol. 7 (1) , 11746
Ligand-induced substrate steering and reshaping of [Ag2(H)]+ scaffold for selective CO2 extrusion from formic acid
Metalloenzymes preorganize the reaction environment to steer substrate(s) along the required reaction coordinate. Here, we show that phosphine ligands selectively facilitate protonation of binuclear silver hydride cations, [LAg2(H)]+by optimizing the geometry of the active site. This is a key step in the selective, catalysed extrusion of carbon dioxide from formic acid, HO2CH, with important applications (for example, hydrogen storage). Gas-phase ion-molecule reactions, collision-induced dissociation (CID), infrared and ultraviolet action spectroscopy and computational chemistry link structure to reactivity and mechanism. [Ag2(H)]+and [Ph3PAg2(H)]+react with formic acid yielding Lewis adducts, while [(Ph3P)2Ag2(H)]+is unreactive. Using bis(diphenylphosphino)methane (dppm) reshapes the geometry of the binuclear Ag2(H)+scaffold, triggering reactivity towards formic acid, to produce [dppmAg2(O2CH)]+and H2. Decarboxylation of [dppmAg2(O2CH)]+via CID regenerates [dppmAg2(H)]+. These gas-phase insights inspired variable temperature NMR studies that show CO2and H2production at 70 °C from solutions containing dppm, AgBF4, NaO2CH and HO2CH.
- 6 June 2016
- Published by Springer Nature in Nature Communications
- Vol. 7 (1) , 11746
Open AccessLigand-induced substrate steering and reshaping of [Ag2(H)]+ scaffold for selective CO2 extrusion from formic acid
Metalloenzymes preorganize the reaction environment to steer substrate(s) along the required reaction coordinate. Here, we show that phosphine ligands selectively facilitate protonation of binuclear silver hydride cations, [LAg2(H)]+by optimizing the geometry of the active site. This is a key step in the selective, catalysed extrusion of carbon dioxide from formic acid, HO2CH, with important applications (for example, hydrogen storage). Gas-phase ion-molecule reactions, collision-induced dissociation (CID), infrared and ultraviolet action spectroscopy and computational chemistry link structure to reactivity and mechanism. [Ag2(H)]+and [Ph3PAg2(H)]+react with formic acid yielding Lewis adducts, while [(Ph3P)2Ag2(H)]+is unreactive. Using bis(diphenylphosphino)methane (dppm) reshapes the geometry of the binuclear Ag2(H)+scaffold, triggering reactivity towards formic acid, to produce [dppmAg2(O2CH)]+and H2. Decarboxylation of [dppmAg2(O2CH)]+via CID regenerates [dppmAg2(H)]+. These gas-phase insights inspired variable temperature NMR studies that show CO2and H2production at 70 °C from solutions containing dppm, AgBF4, NaO2CH and HO2CH.
- 15 January 2016
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 14 (7) , 2272-2281
Blue ‘turn-on’ fluorescent probes for the direct detection of free radicals and nitric oxide in Pseudomonas aeruginosa biofilms
Two novel cell-permeable and bacteria-compatible ‘turn-on’ fluorescent probes, designed to be compatible in a multi-dye system and to fluoresce in the blue region exhibiting emission maxima of 440–490 nm, were synthesized. The profluorescent nitroxide probe (11) was developed to visualize and quantify free radical and redox processes, and the Cu(II)-complexed coumarin-based probe (16a) was developed for NO detection. Confocal laser-scanning microscopy and subsequent digital analysis of Pseudomonas aeruginosa biofilms stained with 11 or 16a determined that free radical and redox processes and NO generation occur predominantly in live cells during normal biofilm growth.
- 15 January 2016
- Published by Royal Society of Chemistry (RSC) in Organic & Biomolecular Chemistry
- Vol. 14 (7) , 2272-2281
Blue ‘turn-on’ fluorescent probes for the direct detection of free radicals and nitric oxide in Pseudomonas aeruginosa biofilms
Two novel cell-permeable and bacteria-compatible ‘turn-on’ fluorescent probes, designed to be compatible in a multi-dye system and to fluoresce in the blue region exhibiting emission maxima of 440–490 nm, were synthesized. The profluorescent nitroxide probe (11) was developed to visualize and quantify free radical and redox processes, and the Cu(II)-complexed coumarin-based probe (16a) was developed for NO detection. Confocal laser-scanning microscopy and subsequent digital analysis of Pseudomonas aeruginosa biofilms stained with 11 or 16a determined that free radical and redox processes and NO generation occur predominantly in live cells during normal biofilm growth.
- Open Access
- 16 October 2015
- Published by Royal Society of Chemistry (RSC) in Nanoscale
- Vol. 7 (43) , 18129-18137
Synthesis, structure and gas-phase reactivity of the mixed silver hydride borohydride nanocluster [Ag3(μ3-H)(μ3-BH4)LPh3]BF4(LPh= bis(diphenylphosphino)methane)
Borohydrides react with silver salts to give products that span multiple scales ranging from discrete mononuclear compounds through to silver nanoparticles and colloids. The cluster cations [Ag3(H)(BH4)L3]+ are observed upon electrospray ionization mass spectrometry of solutions containing sodium borohydride, silver(I) tetrafluoroborate and bis(dimethylphosphino)methane (LMe) or bis(diphenylphosphino)methane (LPh). By adding NaBH4 to an acetonitrile solution of AgBF4 and LPh, cooled to ca. −10 °C, we have been able to isolate the first mixed silver hydride borohydride nanocluster, [Ag3(μ3-H)(μ3-BH4)LPh 3]BF4, and structurally characterise it via X-ray crystallography. Combined gas-phase experiments (LMe and LPh) and DFT calculations (LMe) reveal how loss of a ligand from the cationic complexes [Ag3(H)(BH4)L3]+ provides a change in geometry that facilitates subsequent loss of BH3 to produce the dihydride clusters, [Ag3(H)2Ln]+ (n = 1 and 2). Together with the results of previous studies (Girod et al., Chem. – Eur. J., 2014, 20, 16626), this provides a direct link between mixed silver hydride/borohydride nanoclusters, silver hydride nanoclusters, and silver nanoclusters.
- 16 October 2015
- Published by Royal Society of Chemistry (RSC) in Nanoscale
- Vol. 7 (43) , 18129-18137
Open AccessSynthesis, structure and gas-phase reactivity of the mixed silver hydride borohydride nanocluster [Ag3(μ3-H)(μ3-BH4)LPh3]BF4(LPh= bis(diphenylphosphino)methane)
Borohydrides react with silver salts to give products that span multiple scales ranging from discrete mononuclear compounds through to silver nanoparticles and colloids. The cluster cations [Ag3(H)(BH4)L3]+ are observed upon electrospray ionization mass spectrometry of solutions containing sodium borohydride, silver(I) tetrafluoroborate and bis(dimethylphosphino)methane (LMe) or bis(diphenylphosphino)methane (LPh). By adding NaBH4 to an acetonitrile solution of AgBF4 and LPh, cooled to ca. −10 °C, we have been able to isolate the first mixed silver hydride borohydride nanocluster, [Ag3(μ3-H)(μ3-BH4)LPh 3]BF4, and structurally characterise it via X-ray crystallography. Combined gas-phase experiments (LMe and LPh) and DFT calculations (LMe) reveal how loss of a ligand from the cationic complexes [Ag3(H)(BH4)L3]+ provides a change in geometry that facilitates subsequent loss of BH3 to produce the dihydride clusters, [Ag3(H)2Ln]+ (n = 1 and 2). Together with the results of previous studies (Girod et al., Chem. – Eur. J., 2014, 20, 16626), this provides a direct link between mixed silver hydride/borohydride nanoclusters, silver hydride nanoclusters, and silver nanoclusters.
- 23 June 2015
- Published by American Chemical Society (ACS) in Organometallics
- Vol. 34 (13) , 3255-3263
Prying open a Reactive Site for Allylic Arylation by Phosphine-Ligated Geminally Diaurated Aryl Complexes
- 23 June 2015
- Published by American Chemical Society (ACS) in Organometallics
- Vol. 34 (13) , 3255-3263
Prying open a Reactive Site for Allylic Arylation by Phosphine-Ligated Geminally Diaurated Aryl Complexes
- 1 June 2015
- Published by SAGE Publications in European Journal of Mass Spectrometry
- Vol. 21 (3) , 557-567
Gas-Phase Reactions of the Rhenium Oxide Anions, [ReOx]− (x = 2–4) with the Neutral Organic Substrates Methane, Ethene, Methanol and Acetic Acid
The ion–molecule reactions of the rhenium oxide anions, [ReO x]− ( x = 2–4) with the organic substrates methane, ethene, methanol, and acetic acid have been examined in a linear ion trap mass spectrometer. The only reactivity observed was between [ReO2]− and acetic acid. Isotope-labelled experiments and high-resolution mass spectrometry measurements were used to assign the formulas of the ionic products. Collision-induced dissociation and ion–molecule reactions with acetic acid were used to probe the structures of the mass-selected primary product ions. Density functional theory calculations [PBE0/LanL2DZ6-311+G(d)] were used to suggest possible structures. The three primary product channels observed are likely to arise from the formation of the metallalactone [ReO2(CH2CO2)]− ( m/z 277) and H2, [CH3ReO2(OH)]− ( m/z 251) and CO, and [ReO3]− ( m/z 235), H2 and CH2CO.
- 1 June 2015
- Published by SAGE Publications in European Journal of Mass Spectrometry
- Vol. 21 (3) , 557-567
Gas-Phase Reactions of the Rhenium Oxide Anions, [ReOx]− (x = 2–4) with the Neutral Organic Substrates Methane, Ethene, Methanol and Acetic Acid
The ion–molecule reactions of the rhenium oxide anions, [ReO x]− ( x = 2–4) with the organic substrates methane, ethene, methanol, and acetic acid have been examined in a linear ion trap mass spectrometer. The only reactivity observed was between [ReO2]− and acetic acid. Isotope-labelled experiments and high-resolution mass spectrometry measurements were used to assign the formulas of the ionic products. Collision-induced dissociation and ion–molecule reactions with acetic acid were used to probe the structures of the mass-selected primary product ions. Density functional theory calculations [PBE0/LanL2DZ6-311+G(d)] were used to suggest possible structures. The three primary product channels observed are likely to arise from the formation of the metallalactone [ReO2(CH2CO2)]− ( m/z 277) and H2, [CH3ReO2(OH)]− ( m/z 251) and CO, and [ReO3]− ( m/z 235), H2 and CH2CO.
- 16 April 2015
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 17 (19) , 12598-12607
Decomposition of nitroimidazole ions: experiment and theory
The decomposition of nitroimidazoles involves the nitro functional group −NO 2 irrespective of the initial charge state.
- 16 April 2015
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 17 (19) , 12598-12607
Decomposition of nitroimidazole ions: experiment and theory
The decomposition of nitroimidazoles involves the nitro functional group −NO 2 irrespective of the initial charge state.
- Open Access
- 1 April 2015
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 17 (39) , 25772-25777
Gas-phase VUV photoionisation and photofragmentation of the silver deuteride nanocluster [Ag10D8L6]2+ (L = bis(diphenylphosphino)methane). A joint experimental and theoretical study
The bis(diphenylphosphino)methane (L = Ph2PCH2PPh2) ligated silver deuteride nanocluster dication, [Ag10D8L6]2+, has been synthesised in the condensed phase via the reaction of bis(diphenylphosphino)methane, silver nitrate and sodium borodeuteride in the methanol : chloroform (1 : 1) mixed solvent system. The photoionisation and photofragmentation of this mass-selected cluster were studied using a linear ion trap coupled to the DESIRS VUV beamline of the SOLEIL Synchrotron. At 15.5 eV the main ionic products observed are [Ag10D8L5]2+, [Ag10D8L4]2+, [Ag10D8L6]3+˙, [Ag9D8L4]2+˙, and [AgL2]+. The later two products arise from fragmentation of [Ag10D8L6]3+˙. An analysis of the yields of these product ions as a function of the photon energy reveals the onset for the formation of [AgL2]+ and [Ag9D8L4]2+˙ is around 2 eV higher than that for ionisation to produce [Ag10D8L5]3+˙. The onset of ionisation energy of [Ag10D8L6]2+ was determined to be 9.3 ± 0.3 eV from a fit of the yield of the product ion, [Ag10D8L6]3+˙, as a function of the VUV photon energy. DFT calculations at the RI-PBE/RECP-def2-SVP level of theory were carried out to search for a possible structure of the cluster and to estimate its vertical and adiabatic ionisation energies. The calculated lowest energy structure of the [Ag10D8L6]2+ nanocluster contains a symmetrical bicapped square antiprism as a silver core in which hydrides are located as a mix of triangular faces and edges. Four of the bisphosphines bind to the edges of the cluster core as bidentate ligands, the remaining two bisphosphines bind via a single phosphorus donor atom to each of the apical silver atoms. The DFT calculated adiabatic ionisation energy for this structure is 8.54 eV, in satisfactory agreement with experiment.
- 1 April 2015
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 17 (39) , 25772-25777
Open AccessGas-phase VUV photoionisation and photofragmentation of the silver deuteride nanocluster [Ag10D8L6]2+ (L = bis(diphenylphosphino)methane). A joint experimental and theoretical study
The bis(diphenylphosphino)methane (L = Ph2PCH2PPh2) ligated silver deuteride nanocluster dication, [Ag10D8L6]2+, has been synthesised in the condensed phase via the reaction of bis(diphenylphosphino)methane, silver nitrate and sodium borodeuteride in the methanol : chloroform (1 : 1) mixed solvent system. The photoionisation and photofragmentation of this mass-selected cluster were studied using a linear ion trap coupled to the DESIRS VUV beamline of the SOLEIL Synchrotron. At 15.5 eV the main ionic products observed are [Ag10D8L5]2+, [Ag10D8L4]2+, [Ag10D8L6]3+˙, [Ag9D8L4]2+˙, and [AgL2]+. The later two products arise from fragmentation of [Ag10D8L6]3+˙. An analysis of the yields of these product ions as a function of the photon energy reveals the onset for the formation of [AgL2]+ and [Ag9D8L4]2+˙ is around 2 eV higher than that for ionisation to produce [Ag10D8L5]3+˙. The onset of ionisation energy of [Ag10D8L6]2+ was determined to be 9.3 ± 0.3 eV from a fit of the yield of the product ion, [Ag10D8L6]3+˙, as a function of the VUV photon energy. DFT calculations at the RI-PBE/RECP-def2-SVP level of theory were carried out to search for a possible structure of the cluster and to estimate its vertical and adiabatic ionisation energies. The calculated lowest energy structure of the [Ag10D8L6]2+ nanocluster contains a symmetrical bicapped square antiprism as a silver core in which hydrides are located as a mix of triangular faces and edges. Four of the bisphosphines bind to the edges of the cluster core as bidentate ligands, the remaining two bisphosphines bind via a single phosphorus donor atom to each of the apical silver atoms. The DFT calculated adiabatic ionisation energy for this structure is 8.54 eV, in satisfactory agreement with experiment.
- 1 February 2015
- Published by Elsevier in International Journal of Mass Spectrometry
- Vol. 378, 86-94
Bis(dimethylphosphino)methane-ligated silver chloride, cyanide and hydride cluster cations: Synthesis and gas-phase unimolecular reactivity
- 1 February 2015
- Published by Elsevier in International Journal of Mass Spectrometry
- Vol. 378, 86-94
Bis(dimethylphosphino)methane-ligated silver chloride, cyanide and hydride cluster cations: Synthesis and gas-phase unimolecular reactivity
- 16 October 2014
- Published by Wiley in Chemistry – A European Journal
- Vol. 20 (50) , 16626-16633
Formation and Characterisation of the Silver Hydride Nanocluster Cation [Ag3H2((Ph2P)2CH2)]+ and Its Release of Hydrogen
Multistage mass spectrometry and density functional theory (DFT) were used to characterise the small silver hydride nanocluster, [Ag3H2L]+ (where L=(Ph2P)2CH2) and its gas‐phase unimolecular chemistry. Collision‐induced dissociation (CID) yields [Ag2HL]+ as the major product while laser‐induced dissociation (LID) proceeds via H2 formation and subsequent release from [Ag3H2L]+, giving rise to [Ag3L]+ as the major product. Deuterium labelling studies on [Ag3D2L]+ prove that the source of H2 is from the hydrides and not from the ligand. Comparison of TD‐DFT absorption patterns obtained for the optimised structures with action spectroscopy results, allows assignment of the measured features to structures of precursors and products. Molecular dynamics “on the fly” reveal that AgH loss is favoured in the ground state, but H2 formation and loss is preferred in the first excited state S1, in agreement with CID and LID experimental findings. This indicates favourable photo‐induced formation of H2 and subsequent release from [Ag3H2L]+, an important finding in context of metal hydrides as a hydrogen storage medium, which can subsequently be released by heating or irradiation with light.
- 16 October 2014
- Published by Wiley in Chemistry – A European Journal
- Vol. 20 (50) , 16626-16633
Formation and Characterisation of the Silver Hydride Nanocluster Cation [Ag3H2((Ph2P)2CH2)]+ and Its Release of Hydrogen
Multistage mass spectrometry and density functional theory (DFT) were used to characterise the small silver hydride nanocluster, [Ag3H2L]+ (where L=(Ph2P)2CH2) and its gas‐phase unimolecular chemistry. Collision‐induced dissociation (CID) yields [Ag2HL]+ as the major product while laser‐induced dissociation (LID) proceeds via H2 formation and subsequent release from [Ag3H2L]+, giving rise to [Ag3L]+ as the major product. Deuterium labelling studies on [Ag3D2L]+ prove that the source of H2 is from the hydrides and not from the ligand. Comparison of TD‐DFT absorption patterns obtained for the optimised structures with action spectroscopy results, allows assignment of the measured features to structures of precursors and products. Molecular dynamics “on the fly” reveal that AgH loss is favoured in the ground state, but H2 formation and loss is preferred in the first excited state S1, in agreement with CID and LID experimental findings. This indicates favourable photo‐induced formation of H2 and subsequent release from [Ag3H2L]+, an important finding in context of metal hydrides as a hydrogen storage medium, which can subsequently be released by heating or irradiation with light.