Isabelle Perraud-Gaime
Research Subjects
Isabelle Perraud-Gaime has a total of 123 co-authors. Here are the top co-authors by number of shared publications:
Sevastianos Roussos
7 shared publications- Anne-Marie Farnet
CNRS, IRD, Aix Marseille Univ, Avignon Univ, IMBE, Marseille, France
5 shared publications - Fabio Ziarelli
Aix Marseille Univ, CNRS, Centrale Marseille, FSCM, Marseille, France
5 shared publications - Christian Hernández
Instituto de Biotecnología y Ecología Aplicada (INBIOTECA), Universidad Veracruzana, Av. de las Culturas Veracruzanas No. 101, Col. Emiliano Zapata, C.P. 910910, Xalapa, Veracruz, México
4 shared publications Christopher Augur
IMEP-IRD-UMR-193, Ecologie Microbienne et Biotechnologies, Case 441, Université Paul Cézanne, FST St Jérôme, Avenue Escadrille Normandie-Niemen, F-13397, Marseille Cedex 20, France
4 shared publications- Ernesto Favela-Torres
Department of Biotechnology, Universidad Autónoma Metropolitana, Unidad Iztapalapa, Iztapalapa, México
4 shared publications
Latest Publications
- Open Access
- 19 March 2021
- Published by Instituto de Ecologia, A.C. in Madera y Bosques
- Vol. 27 (1)
Soil bioindicators associated to different management regimes of Cedrela odorata plantations
A good bioindicator of soil health is one that perceives minor changes due to changes in soil management and leads to changes in the processes of the soil ecosystem. The aim was to evaluate the use of soil bioindicators in the determination of the utility of two different Cedrela odorata forestry management systems. The litter and soil samples were collected from the rhizosphere of a monoculture (with no fertilization nor irrigation), and a co-culture (with fertilization and irrigation) stand with Citrus latifolia. The soil and litter bioindicators measured were the activity of acetylesterase (FDA), acid phosphatase (AcPh), alkaline phosphatase (AlkPh), laccase, and the estimation of the potential net rate of carbon mineralization (PNRCM). The results indicated that soil enzyme activities (FDA and phosphatases) in the litter were sensitive to the different management system treatments. Enzymatic activity, per unit dry weight, was higher in litter of co-culture (FDA = 1.05 nkat g-1 AcPh = 1.33 nkat g-1; AlkPh = 03.0 nkat g-1) than in litter of monoculture (FDA = 0.617nkat g-1; AcPh = 0.40 nkat g-1; AlkPh = 0. 983 nkat g-1). Differences in soil total nitrogen content, organic matter (OM) content, and micronutrients were found. In general, the co-culture stand (with fertilization and irrigation) with C. latifolia showed the best results.
- 19 March 2021
- Published by Instituto de Ecologia, A.C. in Madera y Bosques
- Vol. 27 (1)
Open AccessSoil bioindicators associated to different management regimes of Cedrela odorata plantations
A good bioindicator of soil health is one that perceives minor changes due to changes in soil management and leads to changes in the processes of the soil ecosystem. The aim was to evaluate the use of soil bioindicators in the determination of the utility of two different Cedrela odorata forestry management systems. The litter and soil samples were collected from the rhizosphere of a monoculture (with no fertilization nor irrigation), and a co-culture (with fertilization and irrigation) stand with Citrus latifolia. The soil and litter bioindicators measured were the activity of acetylesterase (FDA), acid phosphatase (AcPh), alkaline phosphatase (AlkPh), laccase, and the estimation of the potential net rate of carbon mineralization (PNRCM). The results indicated that soil enzyme activities (FDA and phosphatases) in the litter were sensitive to the different management system treatments. Enzymatic activity, per unit dry weight, was higher in litter of co-culture (FDA = 1.05 nkat g-1 AcPh = 1.33 nkat g-1; AlkPh = 03.0 nkat g-1) than in litter of monoculture (FDA = 0.617nkat g-1; AcPh = 0.40 nkat g-1; AlkPh = 0. 983 nkat g-1). Differences in soil total nitrogen content, organic matter (OM) content, and micronutrients were found. In general, the co-culture stand (with fertilization and irrigation) with C. latifolia showed the best results.
- 13 April 2019
- Published by Springer Nature in Environmental Science and Pollution Research
- Vol. 26 (16) , 16366-16377
Assessment of water quality from the Blue Lagoon of El Cobre mine in Santiago de Cuba: a preliminary study for water reuse
The creation of pit lakes is usually an acceptable solution from the landscaping point of view for voids left by discontinued open-pit mines. However, without rehabilitation, these voids represent a potential environmental risk. The aim of the present work was to assess, for the first time, the water quality, i.e., physicochemical characteristics, metal and metalloid (MM) content, and ecotoxicity of the waters of the El Cobre Blue Lagoon, a pit lake formed in an open-pit copper mine in Cuba. Potential effects of rainy season vs. dry season and spatial location (different depths) on water characteristics were considered. Results revealed that water contained was moderately acidic (pH = 4.6 ± 0.2), with high electrical conductivity (EC = 3.02 ± 0.03 mS cm−1), whatever the season. Dissolved oxygen (DO = 9.9 ± 2.0 mg L−1), total dissolved solid (TDS = 7003 ± 245 mg L−1), and sulfate concentration (6556 ± 1410 mg L−1) in the El Cobre Blue Lagoon water were above acceptable limits for sources of surface water as recommended by Cuban standard (NC 1021:2014). High copper (43.6 ± 1.7 mg L−1) and manganese (24.1 ± 1.1 mg L−1) contents were detected. Except for EC, sulfates, chlorides, TDS, nitrates, and phosphates, other physicochemical parameters were stable between dry and rainy seasons (p < 0.05). El Cobre Blue Lagoon waters showed an ecotoxicological impact on Vibrio fischeri. No significant differences were detected between all sampling points in the lake for each parameter monitored for a given time. These first results show the spatial homogeneity but poor quality of waters from El Cobre Blue Lagoon. Remediation processes need to be implemented in order to lessen the human and environmental health risk and favor potential water reuse. We suggest the use of constructed wetlands for water treatment. This preliminary research work can serve to alert Cuban local public authorities to the need to rehabilitate such sites.
- 13 April 2019
- Published by Springer Nature in Environmental Science and Pollution Research
- Vol. 26 (16) , 16366-16377
Assessment of water quality from the Blue Lagoon of El Cobre mine in Santiago de Cuba: a preliminary study for water reuse
The creation of pit lakes is usually an acceptable solution from the landscaping point of view for voids left by discontinued open-pit mines. However, without rehabilitation, these voids represent a potential environmental risk. The aim of the present work was to assess, for the first time, the water quality, i.e., physicochemical characteristics, metal and metalloid (MM) content, and ecotoxicity of the waters of the El Cobre Blue Lagoon, a pit lake formed in an open-pit copper mine in Cuba. Potential effects of rainy season vs. dry season and spatial location (different depths) on water characteristics were considered. Results revealed that water contained was moderately acidic (pH = 4.6 ± 0.2), with high electrical conductivity (EC = 3.02 ± 0.03 mS cm−1), whatever the season. Dissolved oxygen (DO = 9.9 ± 2.0 mg L−1), total dissolved solid (TDS = 7003 ± 245 mg L−1), and sulfate concentration (6556 ± 1410 mg L−1) in the El Cobre Blue Lagoon water were above acceptable limits for sources of surface water as recommended by Cuban standard (NC 1021:2014). High copper (43.6 ± 1.7 mg L−1) and manganese (24.1 ± 1.1 mg L−1) contents were detected. Except for EC, sulfates, chlorides, TDS, nitrates, and phosphates, other physicochemical parameters were stable between dry and rainy seasons (p < 0.05). El Cobre Blue Lagoon waters showed an ecotoxicological impact on Vibrio fischeri. No significant differences were detected between all sampling points in the lake for each parameter monitored for a given time. These first results show the spatial homogeneity but poor quality of waters from El Cobre Blue Lagoon. Remediation processes need to be implemented in order to lessen the human and environmental health risk and favor potential water reuse. We suggest the use of constructed wetlands for water treatment. This preliminary research work can serve to alert Cuban local public authorities to the need to rehabilitate such sites.
- 2 January 2019
- Published by Springer Nature in 3 Biotech
- Vol. 9 (1) , 1-9
Use of water hyacinth as a substrate for the production of filamentous fungal hydrolytic enzymes in solid-state fermentation
The objective of the present work was to evaluate the water hyacinth (WH) as a substrate for the production of hydrolytic enzymes (cellulases and hemicellulases) of 100 strains of filamentous fungi under conditions of solid growth. Five fungal strains, identified as Trichoderma harzianum, Trichoderma atroviride, Penicillium griseofulvum, Penicillium commune and Aspergillus versicolor, were selected and studied for their ability to grow on water hyacinth as a substrate and carbon source only, evaluating hydrolytic enzymatic activities (α-l-arabinofuranosidase, cellulase, xylanase and β-d-xylopyranosidase) and extracellular protein per g of water hyacinth dry matter (gdm). The five strains selected were able to produce the four enzymes studied; however, T. harzianum strain PBCA produces the highest xylanase (149.3 ± 14.3 IU/gdm at 108 h), cellulase (16.4 ± 0.6 IU/gdm at 84 h) and β-d-xylopyranosidase (127.7 ± 14.8 IU/gdm at 48 h). In contrast, the fungus with the highest α-l-arabinofuranosidase activity was A. versicolor, with 129.8 ± 13.3 IU/gdm after 108 h. In conclusion, T. harzianum showed the best production of the hydrolytic enzymes studied, using as a matrix and carbon source, water hyacinth. In addition, catalytic activities of arabinofuranosidase and xylopyranosidase were reported for the first time in T. versicolor and T. harzianum.
- 2 January 2019
- Published by Springer Nature in 3 Biotech
- Vol. 9 (1) , 1-9
Use of water hyacinth as a substrate for the production of filamentous fungal hydrolytic enzymes in solid-state fermentation
The objective of the present work was to evaluate the water hyacinth (WH) as a substrate for the production of hydrolytic enzymes (cellulases and hemicellulases) of 100 strains of filamentous fungi under conditions of solid growth. Five fungal strains, identified as Trichoderma harzianum, Trichoderma atroviride, Penicillium griseofulvum, Penicillium commune and Aspergillus versicolor, were selected and studied for their ability to grow on water hyacinth as a substrate and carbon source only, evaluating hydrolytic enzymatic activities (α-l-arabinofuranosidase, cellulase, xylanase and β-d-xylopyranosidase) and extracellular protein per g of water hyacinth dry matter (gdm). The five strains selected were able to produce the four enzymes studied; however, T. harzianum strain PBCA produces the highest xylanase (149.3 ± 14.3 IU/gdm at 108 h), cellulase (16.4 ± 0.6 IU/gdm at 84 h) and β-d-xylopyranosidase (127.7 ± 14.8 IU/gdm at 48 h). In contrast, the fungus with the highest α-l-arabinofuranosidase activity was A. versicolor, with 129.8 ± 13.3 IU/gdm after 108 h. In conclusion, T. harzianum showed the best production of the hydrolytic enzymes studied, using as a matrix and carbon source, water hyacinth. In addition, catalytic activities of arabinofuranosidase and xylopyranosidase were reported for the first time in T. versicolor and T. harzianum.
- 1 October 2018
- Published by Elsevier in Bioresource Technology
- Vol. 265, 291-298
Effect of stirring on growth and cellulolytic enzymes production by Trichoderma harzianum in a novel bench-scale solid-state fermentation bioreactor
- 1 October 2018
- Published by Elsevier in Bioresource Technology
- Vol. 265, 291-298
Effect of stirring on growth and cellulolytic enzymes production by Trichoderma harzianum in a novel bench-scale solid-state fermentation bioreactor
- 1 January 2018
- Published by Begell House Inc. Publishers in International Journal of Medicinal Mushrooms
- Vol. 20 (12) , 1185-1195
Proximal Composition, Nutraceutical Properties, and Acute Toxicity Study of Culinary-Medicinal Oyster Mushroom Powder, Pleurotus ostreatus (Agaricomycetes)
A compositional study was performed on fruiting-body powder of the culinary-medicinal oyster mushroom Pleurotus ostreatus for applications as a nutraceutical/functional food. Carbohydrates (55 g/100 g dry weight [dw]) and proteins (27.45 g/100 g dw, with an in vitro digestibility of 75%) appear to be the major components, but fat content was low (4 g/100 g dw). Pleurotus powder has important micronutrients such as minerals (Fe, Cu, Zn, Mn, Mg, and Co) and ascorbic acid, as well as nonnutrients (i.e., phenolics) with antioxidant potential. A powder-derived aqueous extract had a phenolic compound content of 138 mg/100 g that showed 2,2-diphenyl-1-picrylhydrazyl radical scavenging and inhibition of membrane-lipid peroxidation activities of 58.3% and 61.4%, respectively. The presence of β-1,3-1,6-D-glucans was also demonstrated (1.54 g/100 g). An acute toxicity test proved that Pleurotus powder was safe after oral administration to both male and female mice at a dose of 2000 mg/kg. The combination of rich nutritional composition, bioactivity, and safety in P. ostreatus fruiting-body powder highlights its potential as a nutraceutical agent promoting health and life quality.
- 1 January 2018
- Published by Begell House Inc. Publishers in International Journal of Medicinal Mushrooms
- Vol. 20 (12) , 1185-1195
Proximal Composition, Nutraceutical Properties, and Acute Toxicity Study of Culinary-Medicinal Oyster Mushroom Powder, Pleurotus ostreatus (Agaricomycetes)
A compositional study was performed on fruiting-body powder of the culinary-medicinal oyster mushroom Pleurotus ostreatus for applications as a nutraceutical/functional food. Carbohydrates (55 g/100 g dry weight [dw]) and proteins (27.45 g/100 g dw, with an in vitro digestibility of 75%) appear to be the major components, but fat content was low (4 g/100 g dw). Pleurotus powder has important micronutrients such as minerals (Fe, Cu, Zn, Mn, Mg, and Co) and ascorbic acid, as well as nonnutrients (i.e., phenolics) with antioxidant potential. A powder-derived aqueous extract had a phenolic compound content of 138 mg/100 g that showed 2,2-diphenyl-1-picrylhydrazyl radical scavenging and inhibition of membrane-lipid peroxidation activities of 58.3% and 61.4%, respectively. The presence of β-1,3-1,6-D-glucans was also demonstrated (1.54 g/100 g). An acute toxicity test proved that Pleurotus powder was safe after oral administration to both male and female mice at a dose of 2000 mg/kg. The combination of rich nutritional composition, bioactivity, and safety in P. ostreatus fruiting-body powder highlights its potential as a nutraceutical agent promoting health and life quality.
- 23 May 2017
- Published by Wiley in ChemistrySelect
- Vol. 2 (15) , 4213-4218
Chemical and Biological Pretreatments on Sugarcane Bagasse to Enhance its Enzymatic Hydrolysis.
Alkaline and biological lignocellulose pre‐treatments are commonly used to enhance enzymatic hydrolysis and improve ethanol production. In this study, 13 C CPMAS NMR spectroscopy was used to describe changes in sugarcane bagasse (SCB) pre‐treated with NaOH, Ca(OH) 2 and with Pycnoporus sanguineus . Changes in the contents of alkyl C, Carboxyl C, Aromatic C (tertiary, quaternary and p‐hydroxyphenyl C), O ‐alkyl C, amino acids, ergosterol and chitin, as well as in the crystallinity index of cellulose were observed. Through a multivariate analysis, relations between changes in the chemical composition of SCB and enzymatic hydrolysis were established. P. sanguineus promotes better lignin decay, glucose release and hydrolysis yields than chemical pre‐treatments, and increases the amount of amino acids and ergosterol in SCB, while NaOH increases the cellulose crystallinity index. The hydrolysates were fermented with Saccharomyces cerevisiae for 96 h, and analysed through HPLC. The initial composition of the hydrolysates [mg.ml −1 ] and biomass production (cells.ml −1 ) were then related to the ethanol production and fermentation yields. We found that ethanol production and fermentation yields were negatively correlated with cell growth in Saccharomyces , but positively correlated with glucose consumption in the P. sanguineus pre‐treatment. We conclude that the biological pre‐treatment using P. sanguineus in the conditions hereby described, has a potential to increase ethanol productivity.
- 23 May 2017
- Published by Wiley in ChemistrySelect
- Vol. 2 (15) , 4213-4218
Chemical and Biological Pretreatments on Sugarcane Bagasse to Enhance its Enzymatic Hydrolysis.
Alkaline and biological lignocellulose pre‐treatments are commonly used to enhance enzymatic hydrolysis and improve ethanol production. In this study, 13 C CPMAS NMR spectroscopy was used to describe changes in sugarcane bagasse (SCB) pre‐treated with NaOH, Ca(OH) 2 and with Pycnoporus sanguineus . Changes in the contents of alkyl C, Carboxyl C, Aromatic C (tertiary, quaternary and p‐hydroxyphenyl C), O ‐alkyl C, amino acids, ergosterol and chitin, as well as in the crystallinity index of cellulose were observed. Through a multivariate analysis, relations between changes in the chemical composition of SCB and enzymatic hydrolysis were established. P. sanguineus promotes better lignin decay, glucose release and hydrolysis yields than chemical pre‐treatments, and increases the amount of amino acids and ergosterol in SCB, while NaOH increases the cellulose crystallinity index. The hydrolysates were fermented with Saccharomyces cerevisiae for 96 h, and analysed through HPLC. The initial composition of the hydrolysates [mg.ml −1 ] and biomass production (cells.ml −1 ) were then related to the ethanol production and fermentation yields. We found that ethanol production and fermentation yields were negatively correlated with cell growth in Saccharomyces , but positively correlated with glucose consumption in the P. sanguineus pre‐treatment. We conclude that the biological pre‐treatment using P. sanguineus in the conditions hereby described, has a potential to increase ethanol productivity.
- 25 November 2016
- Published by Wiley
- p. 123-157
The Use of Mushrooms in the Development of Functional Foods, Drugs, and Nutraceuticals
- 25 November 2016
- Published by Wiley
- p. 123-157
The Use of Mushrooms in the Development of Functional Foods, Drugs, and Nutraceuticals
- 14 October 2016
- Published by Springer Nature in Applied Microbiology and Biotechnology
- Vol. 101 (3) , 1189-1201
Laccase induction by synthetic dyes in Pycnoporus sanguineus and their possible use for sugar cane bagasse delignification
The use of synthetic dyes for laccase induction in vivo has been scarcely explored. We characterized the effect of adding different synthetic dyes to liquid cultures of Pycnoporus sanguineus on laccase production. We found that carminic acid (CA) can induce 722 % and alizarin yellow 317 % more laccase than control does, and they promoted better fungal biomass development in liquid cultures. Aniline blue and crystal violet did not show such positive effect. CA and alizarin yellow were degraded up to 95 % during P. sanguineus culturing (12 days). With this basis, CA was selected as the best inducer and used to evaluate the induction of laccase on solid-state fermentation (SSF), using sugarcane bagasse (SCB) as substrate, in an attempt to reach selective delignification. We found that laccase induction occurred in SSF, and a slight inhibition of cellulase production was observed when CA was added to the substrate; also, a transformation of SCB under SSF was followed by the 13C cross polarization magic angle spinning (CPMAS) solid-state nuclear magnetic resonance (NMR). Results showed that P. sanguineus can selectively delignify SCB, decreasing aromatic C compounds by 32.67 % in 16 days; O-alkyl C region (polysaccharides) was degraded less than 2 %; delignification values were not correlated with laccase activities. Cellulose-crystallinity index was increased by 27.24 % in absence of CA and 15.94 % when 0.01 mM of CA was added to SCB; this dye also inhibits the production of fungal biomass in SSF (measured as alkyl C gain). We conclude that CA is a good inducer of laccase in liquid media, and that P. sanguineus is a fungus with high potential for biomass delignification.
- 14 October 2016
- Published by Springer Nature in Applied Microbiology and Biotechnology
- Vol. 101 (3) , 1189-1201
Laccase induction by synthetic dyes in Pycnoporus sanguineus and their possible use for sugar cane bagasse delignification
The use of synthetic dyes for laccase induction in vivo has been scarcely explored. We characterized the effect of adding different synthetic dyes to liquid cultures of Pycnoporus sanguineus on laccase production. We found that carminic acid (CA) can induce 722 % and alizarin yellow 317 % more laccase than control does, and they promoted better fungal biomass development in liquid cultures. Aniline blue and crystal violet did not show such positive effect. CA and alizarin yellow were degraded up to 95 % during P. sanguineus culturing (12 days). With this basis, CA was selected as the best inducer and used to evaluate the induction of laccase on solid-state fermentation (SSF), using sugarcane bagasse (SCB) as substrate, in an attempt to reach selective delignification. We found that laccase induction occurred in SSF, and a slight inhibition of cellulase production was observed when CA was added to the substrate; also, a transformation of SCB under SSF was followed by the 13C cross polarization magic angle spinning (CPMAS) solid-state nuclear magnetic resonance (NMR). Results showed that P. sanguineus can selectively delignify SCB, decreasing aromatic C compounds by 32.67 % in 16 days; O-alkyl C region (polysaccharides) was degraded less than 2 %; delignification values were not correlated with laccase activities. Cellulose-crystallinity index was increased by 27.24 % in absence of CA and 15.94 % when 0.01 mM of CA was added to SCB; this dye also inhibits the production of fungal biomass in SSF (measured as alkyl C gain). We conclude that CA is a good inducer of laccase in liquid media, and that P. sanguineus is a fungus with high potential for biomass delignification.