José Rafael Tovar Cuevas
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
José Rafael Tovar Cuevas has a total of 110 co-authors. Here are the top co-authors by number of shared publications:
- Jennyfer Portilla Yela
School of Industrial Engineering, University of Valle, Cali, Valle del Cauca, Colombia.
5 shared publications - Juan David Díaz Mutis
Estadístico epidemiólogo en la Secretaría Departamental de Salud del Valle del Cauca
5 shared publications - Andrés Felipe Ochoa Muñoz
Profesor Asociado, Universidad del Valle
3 shared publications - Diego Fernando Manotas-Duque
School of Industrial Engineering, Universidad del Valle, Cali 760001, Colombia
3 shared publications - Paula Andrea Hoyos Hernández
Pontificia Universidad Javeriana
3 shared publications - Karla Vargas Solera
Investigadora y docente en la Universidad Estatal a Distancia (UNED) de Costa Rica
2 shared publications
Latest Publications
- Open Access
- 26 February 2026
- Published by Elsevier in Dialogues in Health
- Vol. 8, 100287
Inequalities, eating practices and beliefs among transgender women in Colombia: Mixed approaches in research
- 26 February 2026
- Published by Elsevier in Dialogues in Health
- Vol. 8, 100287
Open AccessInequalities, eating practices and beliefs among transgender women in Colombia: Mixed approaches in research
- Open Access
- 24 February 2026
- Published by Corporation Universidad de la Costa, CUC in INGE CUC
- Vol. 22 (1)
Predicting waiting times in emergency departments using colored Petri nets
Introduction: Waiting time is a key performance indicator determining the quality and timeliness of the emergency department (ED). Objective: In this research, a model to predict waiting times from triage to medical consultation in ED was designed, considering the patient priority, the place of medical care, and the reason for consultation by time slot and weekdays. This paper also predicted patient average in triage, admission, and medical consultation queues. Method: A discrete event simulation model was developed using a colored Petri net (CPN) framework, representing the detailed process and patient flows in ED. Next, the model was simulated in CPN Tools software and validated with historical data. Finally, the model experimented with several scenarios between patients' arrival rates and initial system load conditions (ED congestion). Results: The simulation provided helpful information for patients once they arrive at the ED and Emergency Medical System, as it must choose the hospital with the shorter waiting times for transferring patients by ambulance from the scene. Moreover, predicting waiting times would contribute to integrating the health system's stakeholders (EDs, ambulances, and emergency medical dispatch centers). Conclusions: This model presented a deeper detail, considering more specific patient characteristics than the literature showed. Furthermore, the predicted average waiting times considered more factors associated with the patient, time, and ED congestion than the average or some percentiles according to patient triage.
- 24 February 2026
- Published by Corporation Universidad de la Costa, CUC in INGE CUC
- Vol. 22 (1)
Open AccessPredicting waiting times in emergency departments using colored Petri nets
Introduction: Waiting time is a key performance indicator determining the quality and timeliness of the emergency department (ED). Objective: In this research, a model to predict waiting times from triage to medical consultation in ED was designed, considering the patient priority, the place of medical care, and the reason for consultation by time slot and weekdays. This paper also predicted patient average in triage, admission, and medical consultation queues. Method: A discrete event simulation model was developed using a colored Petri net (CPN) framework, representing the detailed process and patient flows in ED. Next, the model was simulated in CPN Tools software and validated with historical data. Finally, the model experimented with several scenarios between patients' arrival rates and initial system load conditions (ED congestion). Results: The simulation provided helpful information for patients once they arrive at the ED and Emergency Medical System, as it must choose the hospital with the shorter waiting times for transferring patients by ambulance from the scene. Moreover, predicting waiting times would contribute to integrating the health system's stakeholders (EDs, ambulances, and emergency medical dispatch centers). Conclusions: This model presented a deeper detail, considering more specific patient characteristics than the literature showed. Furthermore, the predicted average waiting times considered more factors associated with the patient, time, and ED congestion than the average or some percentiles according to patient triage.
- Open Access
- 27 November 2025
- Published by Instituto Nacional de Salud (Colombia) in Biomédica
- Vol. 45 (Sp. 2) , 83-99
Characterization of Colombian departments based on climatic factors, infrastructure, basic service access, and dengue incidence rate
Introduction. Dengue is an endemic disease in Colombia, with spatial variations influenced by climatic, socioeconomic, and basic service access factors. Territorial characterization based on these determinants supports a better understanding of disease distribution and enables the design of more effective control strategies.Objectives. To identify groups of departments in Colombia based on the relationship between dengue incidence rates and climatic, socioeconomic, and basic service access factors in 2023.Materials and methods. Data were collected from the Instituto Nacional de Salud of Colombia, the Encuesta Nacional de Calidad de Vida, and satellite sources, such as ERA5 and CHIRPS. Variables related to access to basic services (drinking water, sewage, and waste collection), housing deficit, temperature, precipitation, and the normalized difference vegetation index (NDVI) were analyzed. A multiple factor analysis was applied to reduce dimensionality, followed by hierarchical clustering and self-organizing maps to identify department groupings.Results. Three groups of departments with distinct characteristics were identified. The most vulnerable group (group 3) showed an average incidence rate of 1,046.87 cases per 100,000 inhabitants, associated with extreme housing deficits, limited access to basic services, and climatic conditions favorable for vector proliferation.Conclusions. The analysis identified key territorial patterns in dengue incidence and highlighted the influence of structural factors on disease transmission. These findings provide a foundation to strengthen public policies and design more targeted prevention and control strategies in the most vulnerable regions.
- 27 November 2025
- Published by Instituto Nacional de Salud (Colombia) in Biomédica
- Vol. 45 (Sp. 2) , 83-99
Open AccessCharacterization of Colombian departments based on climatic factors, infrastructure, basic service access, and dengue incidence rate
Introduction. Dengue is an endemic disease in Colombia, with spatial variations influenced by climatic, socioeconomic, and basic service access factors. Territorial characterization based on these determinants supports a better understanding of disease distribution and enables the design of more effective control strategies.Objectives. To identify groups of departments in Colombia based on the relationship between dengue incidence rates and climatic, socioeconomic, and basic service access factors in 2023.Materials and methods. Data were collected from the Instituto Nacional de Salud of Colombia, the Encuesta Nacional de Calidad de Vida, and satellite sources, such as ERA5 and CHIRPS. Variables related to access to basic services (drinking water, sewage, and waste collection), housing deficit, temperature, precipitation, and the normalized difference vegetation index (NDVI) were analyzed. A multiple factor analysis was applied to reduce dimensionality, followed by hierarchical clustering and self-organizing maps to identify department groupings.Results. Three groups of departments with distinct characteristics were identified. The most vulnerable group (group 3) showed an average incidence rate of 1,046.87 cases per 100,000 inhabitants, associated with extreme housing deficits, limited access to basic services, and climatic conditions favorable for vector proliferation.Conclusions. The analysis identified key territorial patterns in dengue incidence and highlighted the influence of structural factors on disease transmission. These findings provide a foundation to strengthen public policies and design more targeted prevention and control strategies in the most vulnerable regions.
- Open Access
- 1 January 2025
- Published by Universidad Nacional de Costa Rica in Uniciencia
- Vol. 39 (1) , 1-21
Application of the LDA Model for Topic Identification: A Case Study on Dengue Diagnosis
[Objective]: This research aimed to identify and analyze topics in the scientific literature related to dengue, with a focus on diagnosis, signs, and symptoms using the Latent Dirichlet Assignment (LDA) model. [Methodology]: Articles were collected from various databases, including VHL, Web of Science, Ovid, Scopus, PubMed, Health & Medical, ScienceDirect, and Google Scholar, covering 2000-2024. The search equation was designed using key terms such as “dengue,” “signs,” “symptoms,” and “diagnosis,” along with MeSH terms to ensure the inclusion of relevant articles. The LDA model was then implemented to analyze the collected articles. [Results]: The implementation of the LDA model identified four main themes: 1) Dengue diagnosis and clinical presentation, 2) Research and control interventions, 3) Severe dengue and its clinical manifestations, and 4) Virus detection, including dengue, zika, and chikungunya. This thematic analysis facilitated the organization and understanding of literature, providing an overview of the predominant themes in dengue research. [Conclusions]: The study’s approach not only enhanced the organization and understanding of the articles found but also provided insights into the predominant themes in dengue literature, which may guide future research and improve diagnostic and treatment strategies.
- 1 January 2025
- Published by Universidad Nacional de Costa Rica in Uniciencia
- Vol. 39 (1) , 1-21
Open AccessApplication of the LDA Model for Topic Identification: A Case Study on Dengue Diagnosis
[Objective]: This research aimed to identify and analyze topics in the scientific literature related to dengue, with a focus on diagnosis, signs, and symptoms using the Latent Dirichlet Assignment (LDA) model. [Methodology]: Articles were collected from various databases, including VHL, Web of Science, Ovid, Scopus, PubMed, Health & Medical, ScienceDirect, and Google Scholar, covering 2000-2024. The search equation was designed using key terms such as “dengue,” “signs,” “symptoms,” and “diagnosis,” along with MeSH terms to ensure the inclusion of relevant articles. The LDA model was then implemented to analyze the collected articles. [Results]: The implementation of the LDA model identified four main themes: 1) Dengue diagnosis and clinical presentation, 2) Research and control interventions, 3) Severe dengue and its clinical manifestations, and 4) Virus detection, including dengue, zika, and chikungunya. This thematic analysis facilitated the organization and understanding of literature, providing an overview of the predominant themes in dengue research. [Conclusions]: The study’s approach not only enhanced the organization and understanding of the articles found but also provided insights into the predominant themes in dengue literature, which may guide future research and improve diagnostic and treatment strategies.
- Open Access
- 16 February 2024
- Published by Emergentes - Revista Científica in Emergentes - Revista Científica
- Vol. 4 (1) , 316-349
Factores asociados al desempeño en el primer curso de matemáticas para estudiantes universitarios
En este artículo se propone una aproximación heurística para medir el nivel de preocupación y un modelo que predice la probabilidad de aprobar el primer curso de matemáticas en la universidad. Se utilizó una La metodología cuantitativa centrada en el uso de estadística inferencial. Se aplicó un instrumento tipo encuesta con preguntas cerradas a 502 estudiantes de primer semestre matriculados en diferentes carreras de una universidad privada en Cali-Colombia. Los resultados permiten contar con un indicador que aproxima los niveles de preocupación frente a la asignatura de matemáticas que presentan los estudiantes de carreras diferentes a la de matemáticas cuando van a tomar su primer curso de esta disciplina en la universidad. La probabilidad de reprobar el curso aumenta con el incremento de los niveles de preocupación y cuando se ha dejado transcurrir mucho tiempo entre la salida del colegio y el ingreso a la universidad. Se concluye que los niveles de preocupación inicial frente al curso pueden ser funcionales, pero no necesariamente patológicos. El modelo de probabilidad propuesto puede ser una herramienta útil para que los profesores identifiquen las condiciones iniciales en las que llegan los estudiantes al curso y usen esta información como insumo para su planificación.
- 16 February 2024
- Published by Emergentes - Revista Científica in Emergentes - Revista Científica
- Vol. 4 (1) , 316-349
Open AccessFactores asociados al desempeño en el primer curso de matemáticas para estudiantes universitarios
En este artículo se propone una aproximación heurística para medir el nivel de preocupación y un modelo que predice la probabilidad de aprobar el primer curso de matemáticas en la universidad. Se utilizó una La metodología cuantitativa centrada en el uso de estadística inferencial. Se aplicó un instrumento tipo encuesta con preguntas cerradas a 502 estudiantes de primer semestre matriculados en diferentes carreras de una universidad privada en Cali-Colombia. Los resultados permiten contar con un indicador que aproxima los niveles de preocupación frente a la asignatura de matemáticas que presentan los estudiantes de carreras diferentes a la de matemáticas cuando van a tomar su primer curso de esta disciplina en la universidad. La probabilidad de reprobar el curso aumenta con el incremento de los niveles de preocupación y cuando se ha dejado transcurrir mucho tiempo entre la salida del colegio y el ingreso a la universidad. Se concluye que los niveles de preocupación inicial frente al curso pueden ser funcionales, pero no necesariamente patológicos. El modelo de probabilidad propuesto puede ser una herramienta útil para que los profesores identifiquen las condiciones iniciales en las que llegan los estudiantes al curso y usen esta información como insumo para su planificación.
- Open Access
- 18 January 2024
- Published by JMIR Publications Inc. in JMIR Preprints
Factorial Structure of the Patient Health Questionnaire-9 in long-term survivors of severe COVID-19 (Preprint)
BACKGROUND Previous investigations related to the factor structure of the Patient Health Questionnaire (PHQ-9) have yielded inconclusive results, and there is little consensus about the optimal arrangement of its components. OBJECTIVE This study aim to examine the psychometric properties of the nine-item Patient Health Questionnaire (PHQ-9) in a sample of long-term survivors of severe COVID-19. METHODS The PHQ-9 was administered to 177 patients who were categorized as having suffered previous severe COVID-19 and were followed up to 20 months after this event. Exploratory and confirmatory factor and reliability analyses were performed. RESULTS The one-factor model of PHQ-9 was determined to best fit the sample and demonstrated good psychometric properties and high internal consistency. The factor loadings for the two-factor structure were not consistent with theoretical frameworks of depression and demonstrated lower internal consistency. Subsequent confirmatory analysis indicated a good model fit for the one-factor model CONCLUSIONS The single-factor PHQ-9 was shown to be a valid and reliable instrument for assessing depression in the current sample of patients with history severe COVID-19, followed up to 20 months after this event
- 18 January 2024
- Published by JMIR Publications Inc. in JMIR Preprints
Open AccessFactorial Structure of the Patient Health Questionnaire-9 in long-term survivors of severe COVID-19 (Preprint)
BACKGROUND Previous investigations related to the factor structure of the Patient Health Questionnaire (PHQ-9) have yielded inconclusive results, and there is little consensus about the optimal arrangement of its components. OBJECTIVE This study aim to examine the psychometric properties of the nine-item Patient Health Questionnaire (PHQ-9) in a sample of long-term survivors of severe COVID-19. METHODS The PHQ-9 was administered to 177 patients who were categorized as having suffered previous severe COVID-19 and were followed up to 20 months after this event. Exploratory and confirmatory factor and reliability analyses were performed. RESULTS The one-factor model of PHQ-9 was determined to best fit the sample and demonstrated good psychometric properties and high internal consistency. The factor loadings for the two-factor structure were not consistent with theoretical frameworks of depression and demonstrated lower internal consistency. Subsequent confirmatory analysis indicated a good model fit for the one-factor model CONCLUSIONS The single-factor PHQ-9 was shown to be a valid and reliable instrument for assessing depression in the current sample of patients with history severe COVID-19, followed up to 20 months after this event
- Open Access
- 8 January 2024
- Published by Emergentes - Revista Científica in Emergentes - Revista Científica
- Vol. 4 (1) , 315-349
Factores asociados al desempeño en el primer curso de matemáticas para estudiantes universitarios
En este artículo se propone una aproximación heurística para medir el nivel de preocupación y un modelo que predice la probabilidad de aprobar el primer curso de matemáticas en la universidad. Se utilizó una La metodología cuantitativa centrada en el uso de estadística inferencial. Se aplicó un instrumento tipo encuesta con preguntas cerradas a 502 estudiantes de primer semestre matriculados en diferentes carreras de una universidad privada en Cali-Colombia. Los resultados permiten contar con un indicador que aproxima los niveles de preocupación frente a la asignatura de matemáticas que presentan los estudiantes de carreras diferentes a la de matemáticas cuando van a tomar su primer curso de esta disciplina en la universidad. La probabilidad de reprobar el curso aumenta con el incremento de los niveles de preocupación y cuando se ha dejado transcurrir mucho tiempo entre la salida del colegio y el ingreso a la universidad. Se concluye que los niveles de preocupación inicial frente al curso pueden ser funcionales, pero no necesariamente patológicos. El modelo de probabilidad propuesto puede ser una herramienta útil para que los profesores identifiquen las condiciones iniciales en las que llegan los estudiantes al curso y usen esta información como insumo para su planificación.
- 8 January 2024
- Published by Emergentes - Revista Científica in Emergentes - Revista Científica
- Vol. 4 (1) , 315-349
Open AccessFactores asociados al desempeño en el primer curso de matemáticas para estudiantes universitarios
En este artículo se propone una aproximación heurística para medir el nivel de preocupación y un modelo que predice la probabilidad de aprobar el primer curso de matemáticas en la universidad. Se utilizó una La metodología cuantitativa centrada en el uso de estadística inferencial. Se aplicó un instrumento tipo encuesta con preguntas cerradas a 502 estudiantes de primer semestre matriculados en diferentes carreras de una universidad privada en Cali-Colombia. Los resultados permiten contar con un indicador que aproxima los niveles de preocupación frente a la asignatura de matemáticas que presentan los estudiantes de carreras diferentes a la de matemáticas cuando van a tomar su primer curso de esta disciplina en la universidad. La probabilidad de reprobar el curso aumenta con el incremento de los niveles de preocupación y cuando se ha dejado transcurrir mucho tiempo entre la salida del colegio y el ingreso a la universidad. Se concluye que los niveles de preocupación inicial frente al curso pueden ser funcionales, pero no necesariamente patológicos. El modelo de probabilidad propuesto puede ser una herramienta útil para que los profesores identifiquen las condiciones iniciales en las que llegan los estudiantes al curso y usen esta información como insumo para su planificación.
- Open Access
- 1 January 2023
- Published by FapUNIFESP (SciELO) in Paidéia (Ribeirão Preto)
- Vol. 33, e3315
Emotional States, Adherence and Prevention Behaviors in Trans Women during the COVID-19 Lockdown
The pandemic generated multiple biopsychosocial challenges that significantly impacted the health of trans women. The aim of this study is to characterize emotional states and resilience in trans women in Colombia and their relationship to COVID-19 adherence behaviors and prevention behaviors during lockdown. The study employed a cross-sectional descriptive correlational design, with an anonymous online questionnaire that was given to 100 trans women in five cities in Colombia. During the pandemic, more than half of trans women experienced negative emotional states such as depression, anxiety and somatization, and some positive ones such as resilience and personal growth. The latter two contribute to reinforcing adherence and prevention behaviors. This study demonstrates a clear need to give priority and recognition to trans women and their health needs, in order to protect their rights, their well-being, and their health.
- 1 January 2023
- Published by FapUNIFESP (SciELO) in Paidéia (Ribeirão Preto)
- Vol. 33, e3315
Open AccessEmotional States, Adherence and Prevention Behaviors in Trans Women during the COVID-19 Lockdown
The pandemic generated multiple biopsychosocial challenges that significantly impacted the health of trans women. The aim of this study is to characterize emotional states and resilience in trans women in Colombia and their relationship to COVID-19 adherence behaviors and prevention behaviors during lockdown. The study employed a cross-sectional descriptive correlational design, with an anonymous online questionnaire that was given to 100 trans women in five cities in Colombia. During the pandemic, more than half of trans women experienced negative emotional states such as depression, anxiety and somatization, and some positive ones such as resilience and personal growth. The latter two contribute to reinforcing adherence and prevention behaviors. This study demonstrates a clear need to give priority and recognition to trans women and their health needs, in order to protect their rights, their well-being, and their health.
- Open Access
- 5 December 2022
- Published by Universidad de Manizales in Archivos de Medicina (Manizales)
- Vol. 22 (2) , 332-334
Variables latentes e investigación en Salud
- 5 December 2022
- Published by Universidad de Manizales in Archivos de Medicina (Manizales)
- Vol. 22 (2) , 332-334
Open AccessVariables latentes e investigación en Salud