Jianxiu Shen
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Jianxiu Shen has a total of 24 co-authors. Here are the top co-authors by number of shared publications:
Alfredo Huete
School of Life Sciences, University of Technology Sydney, NSW 2007, Australia
3 shared publications- Fiona H. Evans
Centre for Crop and Food Innovation, Food Futures Institute, Murdoch University, 90 South Street, Murdoch, WA 6150, Australia
3 shared publications - Ngoc Nguyen Tran
Hanoi University of Sciene and Technology
3 shared publications Derek Eamus
School of Life Sciences, University of Technology Sydney, NSW 2007, Australia
2 shared publications- Hai Wang
Murdoch University
2 shared publications - Hasnein Tareque
Department of Primary Industries and Regional Development, Perth 6000, Australia
2 shared publications
Latest Publications
- Open Access
- 29 November 2025
- Published by MDPI AG in Remote Sensing
- Vol. 17 (23) , 3886
Toward Resilience in Broadacre Agriculture: A Methodological Review of Remote Sensing in Crop Productivity, Phenology, and Environmental Stress Detection
Large-scale rainfed cropping systems (broadacre agriculture) face intensifying climate and resource stresses that undermine yield stability and farm livelihoods. Remote sensing (RS) offers critical tools for improving resilience by monitoring crop performance—productivity, phenology, and environmental stress—across large areas and timeframes. This review aims to synthesize methodological advances over the past two decades in applying RS for broadacre crop monitoring and to identify key challenges and integration opportunities. Peer-reviewed studies across diverse crops and regions were systematically examined to evaluate the strengths, limitations, and emerging trends across the three RS application themes. The review finds that (1) RS enables spatially explicit yield estimation from regional to paddock scales, with vegetation indices (VIs) and phenology-adjusted metrics closely correlated with yield. (2) Time-series analyses of RS data effectively capture phenological transitions critical for forecasting, supported by advances in curve fitting, sensor fusion, and machine learning. (3) Thermal and multispectral indices support the early detection of abiotic (drought, heat, salinity) and biotic (pests, disease) stresses, though specificity remains limited. Across themes, methodological silos and sensor integration barriers hinder holistic application. Emerging approaches, such as multi-sensor/scale fusion, RS–crop model data assimilation, and operational and big data integration, provide promising pathways toward resilience-focused decision support. Future research should define quantifiable resilience metrics, cross-theme predictive integration, and accessible tools to guide climate adaptation.
- 29 November 2025
- Published by MDPI AG in Remote Sensing
- Vol. 17 (23) , 3886
Open AccessToward Resilience in Broadacre Agriculture: A Methodological Review of Remote Sensing in Crop Productivity, Phenology, and Environmental Stress Detection
Large-scale rainfed cropping systems (broadacre agriculture) face intensifying climate and resource stresses that undermine yield stability and farm livelihoods. Remote sensing (RS) offers critical tools for improving resilience by monitoring crop performance—productivity, phenology, and environmental stress—across large areas and timeframes. This review aims to synthesize methodological advances over the past two decades in applying RS for broadacre crop monitoring and to identify key challenges and integration opportunities. Peer-reviewed studies across diverse crops and regions were systematically examined to evaluate the strengths, limitations, and emerging trends across the three RS application themes. The review finds that (1) RS enables spatially explicit yield estimation from regional to paddock scales, with vegetation indices (VIs) and phenology-adjusted metrics closely correlated with yield. (2) Time-series analyses of RS data effectively capture phenological transitions critical for forecasting, supported by advances in curve fitting, sensor fusion, and machine learning. (3) Thermal and multispectral indices support the early detection of abiotic (drought, heat, salinity) and biotic (pests, disease) stresses, though specificity remains limited. Across themes, methodological silos and sensor integration barriers hinder holistic application. Emerging approaches, such as multi-sensor/scale fusion, RS–crop model data assimilation, and operational and big data integration, provide promising pathways toward resilience-focused decision support. Future research should define quantifiable resilience metrics, cross-theme predictive integration, and accessible tools to guide climate adaptation.
- Open Access
- 31 October 2025
- Published by MDPI AG in Preprints.org
Toward Resilience in Broadacre Agriculture: A Methodological Review of Remote Sensing in Crop Productivity, Phenology, and Environmental Stress Detection
Large-scale rainfed cropping systems (broadacre agriculture) face intensifying climate and resource stresses that undermine yield stability and farm livelihoods. Remote sensing (RS) offers critical tools for improving resilience by monitoring crop performance—productivity, phenology, and environmental stress—across large areas and timeframes. This review aims to synthesize methodological advances over the past two decades in applying RS for broadacre crop monitoring and to identify key challenges and integration opportunities. Peer-reviewed studies across diverse crops and regions were systematically examined to evaluate the strengths, limitations, and emerging trends across the three RS application themes. The review finds that (1) RS enables spatially explicit yield estimation from regional to paddock scales, with vegetation indices (VIs) and phenology-adjusted metrics closely correlated with yield. (2) Time-series analyses of RS data effectively capture phenological transitions critical for forecasting, supported by advances in curve fitting, sensor fusion, and machine learning. (3) Thermal and multispectral indices support early detection of abiotic (drought, heat, salinity) and biotic (pests, disease) stresses, though specificity remains limited. Across themes, methodological silos and sensor integration barriers hinder holistic application. Emerging approaches—such as multi-sensor/scale fusion, RS–crop model data assimilation, and operational and big data integration—provide promising pathways toward resilience-focused decision support. Future research should define quantifiable resilience metrics and cross-theme predictive integration to guide climate adaptation.
- 31 October 2025
- Published by MDPI AG in Preprints.org
Open AccessToward Resilience in Broadacre Agriculture: A Methodological Review of Remote Sensing in Crop Productivity, Phenology, and Environmental Stress Detection
Large-scale rainfed cropping systems (broadacre agriculture) face intensifying climate and resource stresses that undermine yield stability and farm livelihoods. Remote sensing (RS) offers critical tools for improving resilience by monitoring crop performance—productivity, phenology, and environmental stress—across large areas and timeframes. This review aims to synthesize methodological advances over the past two decades in applying RS for broadacre crop monitoring and to identify key challenges and integration opportunities. Peer-reviewed studies across diverse crops and regions were systematically examined to evaluate the strengths, limitations, and emerging trends across the three RS application themes. The review finds that (1) RS enables spatially explicit yield estimation from regional to paddock scales, with vegetation indices (VIs) and phenology-adjusted metrics closely correlated with yield. (2) Time-series analyses of RS data effectively capture phenological transitions critical for forecasting, supported by advances in curve fitting, sensor fusion, and machine learning. (3) Thermal and multispectral indices support early detection of abiotic (drought, heat, salinity) and biotic (pests, disease) stresses, though specificity remains limited. Across themes, methodological silos and sensor integration barriers hinder holistic application. Emerging approaches—such as multi-sensor/scale fusion, RS–crop model data assimilation, and operational and big data integration—provide promising pathways toward resilience-focused decision support. Future research should define quantifiable resilience metrics and cross-theme predictive integration to guide climate adaptation.
- Open Access
- 22 June 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (13) , 2435
Long-Term Hindcasts of Wheat Yield in Fields Using Remotely Sensed Phenology, Climate Data and Machine Learning
Satellite remote sensing offers a cost-effective means of generating long-term hindcasts of yield that can be used to understand how yield varies in time and space. This study investigated the use of remotely sensed phenology, climate data and machine learning for estimating yield at a resolution suitable for optimising crop management in fields. We used spatially weighted growth curve estimation to identify the timing of phenological events from sequences of Landsat NDVI and derive phenological and seasonal climate metrics. Using data from a 17,000 ha study area, we investigated the relationships between the metrics and yield over 17 years from 2003 to 2019. We compared six statistical and machine learning models for estimating yield: multiple linear regression, mixed effects models, generalised additive models, random forests, support vector regression using radial basis functions and deep learning neural networks. We used a 50-50 train-test split on paddock-years where 50% of paddock-year combinations were randomly selected and used to train each model and the remaining 50% of paddock-years were used to assess the model accuracy. Using only phenological metrics, accuracy was highest using a linear mixed model with a random effect that allowed the relationship between integrated NDVI and yield to vary by year = 0.67, MAE = 0.25 t ha−1, RMSE = 0.33 t ha−1, NRMSE = 0.25). We quantified the improvements in accuracy when seasonal climate metrics were also used as predictors. We identified two optimal models using the combined phenological and seasonal climate metrics: support vector regression and deep learning models ( = 0.68, MAE = 0.25 t ha−1, RMSE = 0.32 t ha−1, NRMSE = 0.25). While the linear mixed model using only phenological metrics performed similarly to the nonlinear models that are also seasonal climate metrics, the nonlinear models can be more easily generalised to estimate yield in years for which training data are unavailable. We conclude that long-term hindcasts of wheat yield in fields, at 30 m spatial resolution, can be produced using remotely sensed phenology from Landsat NDVI, climate data and machine learning.- 22 June 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (13) , 2435
Open AccessLong-Term Hindcasts of Wheat Yield in Fields Using Remotely Sensed Phenology, Climate Data and Machine Learning
Satellite remote sensing offers a cost-effective means of generating long-term hindcasts of yield that can be used to understand how yield varies in time and space. This study investigated the use of remotely sensed phenology, climate data and machine learning for estimating yield at a resolution suitable for optimising crop management in fields. We used spatially weighted growth curve estimation to identify the timing of phenological events from sequences of Landsat NDVI and derive phenological and seasonal climate metrics. Using data from a 17,000 ha study area, we investigated the relationships between the metrics and yield over 17 years from 2003 to 2019. We compared six statistical and machine learning models for estimating yield: multiple linear regression, mixed effects models, generalised additive models, random forests, support vector regression using radial basis functions and deep learning neural networks. We used a 50-50 train-test split on paddock-years where 50% of paddock-year combinations were randomly selected and used to train each model and the remaining 50% of paddock-years were used to assess the model accuracy. Using only phenological metrics, accuracy was highest using a linear mixed model with a random effect that allowed the relationship between integrated NDVI and yield to vary by year = 0.67, MAE = 0.25 t ha−1, RMSE = 0.33 t ha−1, NRMSE = 0.25). We quantified the improvements in accuracy when seasonal climate metrics were also used as predictors. We identified two optimal models using the combined phenological and seasonal climate metrics: support vector regression and deep learning models ( = 0.68, MAE = 0.25 t ha−1, RMSE = 0.32 t ha−1, NRMSE = 0.25). While the linear mixed model using only phenological metrics performed similarly to the nonlinear models that are also seasonal climate metrics, the nonlinear models can be more easily generalised to estimate yield in years for which training data are unavailable. We conclude that long-term hindcasts of wheat yield in fields, at 30 m spatial resolution, can be produced using remotely sensed phenology from Landsat NDVI, climate data and machine learning. - Open Access
- 4 June 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (11) , 2202
The Potential of Landsat NDVI Sequences to Explain Wheat Yield Variation in Fields in Western Australia
Long-term maps of within-field crop yield can help farmers understand how yield varies in time and space and optimise crop management. This study investigates the use of Landsat NDVI sequences for estimating wheat yields in fields in Western Australia (WA). By fitting statistical crop growth curves, identifying the timing and intensity of phenological events, the best single integrated NDVI metric in any year was used to estimate yield. The hypotheses were that: (1) yield estimation could be improved by incorporating additional information about sowing date or break of season in statistical curve fitting for phenology detection; (2) the integrated NDVI metrics derived from phenology detection can estimate yield with greater accuracy than the observed NDVI values at one or two time points only. We tested the hypotheses using one field (~235 ha) in the WA grain belt for training and another field (~143 ha) for testing. Integrated NDVI metrics were obtained using: (1) traditional curve fitting (SPD); (2) curve fitting that incorporates sowing date information (+SD); and (3) curve fitting that incorporates rainfall-based break of season information (+BOS). Yield estimation accuracy using integrated NDVI metrics was further compared to the results using a scalable crop yield mapper (SCYM) model. We found that: (1) relationships between integrated NDVI metrics using the three curve fitting models and yield varied from year to year; (2) overall, +SD marginally improved yield estimation (r = 0.81, RMSE = 0.56 tonnes/ha compared to r = 0.80, RMSE = 0.61 tonnes/ha using SPD), but +BOS did not show obvious improvement (r = 0.80, RMSE = 0.60 tonnes/ha); (3) use of integrated NDVI metrics was more accurate than SCYM (r = 0.70, RMSE = 0.62 tonnes/ha) on average and had higher spatial and yearly consistency with actual yield than using SCYM model. We conclude that sequences of Landsat NDVI have the potential for estimation of wheat yield variation in fields in WA but they need to be combined with additional sources of data to distinguish different relationships between integrated NDVI metrics and yield in different years and locations.
- 4 June 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (11) , 2202
Open AccessThe Potential of Landsat NDVI Sequences to Explain Wheat Yield Variation in Fields in Western Australia
Long-term maps of within-field crop yield can help farmers understand how yield varies in time and space and optimise crop management. This study investigates the use of Landsat NDVI sequences for estimating wheat yields in fields in Western Australia (WA). By fitting statistical crop growth curves, identifying the timing and intensity of phenological events, the best single integrated NDVI metric in any year was used to estimate yield. The hypotheses were that: (1) yield estimation could be improved by incorporating additional information about sowing date or break of season in statistical curve fitting for phenology detection; (2) the integrated NDVI metrics derived from phenology detection can estimate yield with greater accuracy than the observed NDVI values at one or two time points only. We tested the hypotheses using one field (~235 ha) in the WA grain belt for training and another field (~143 ha) for testing. Integrated NDVI metrics were obtained using: (1) traditional curve fitting (SPD); (2) curve fitting that incorporates sowing date information (+SD); and (3) curve fitting that incorporates rainfall-based break of season information (+BOS). Yield estimation accuracy using integrated NDVI metrics was further compared to the results using a scalable crop yield mapper (SCYM) model. We found that: (1) relationships between integrated NDVI metrics using the three curve fitting models and yield varied from year to year; (2) overall, +SD marginally improved yield estimation (r = 0.81, RMSE = 0.56 tonnes/ha compared to r = 0.80, RMSE = 0.61 tonnes/ha using SPD), but +BOS did not show obvious improvement (r = 0.80, RMSE = 0.60 tonnes/ha); (3) use of integrated NDVI metrics was more accurate than SCYM (r = 0.70, RMSE = 0.62 tonnes/ha) on average and had higher spatial and yearly consistency with actual yield than using SCYM model. We conclude that sequences of Landsat NDVI have the potential for estimation of wheat yield variation in fields in WA but they need to be combined with additional sources of data to distinguish different relationships between integrated NDVI metrics and yield in different years and locations.
- Open Access
- 28 May 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (11) , 2128
Spatially Weighted Estimation of Broadacre Crop Growth Improves Gap-Filling of Landsat NDVI
Seasonal climate is the main driver of crop growth and yield in broadacre grain cropping systems. With a 40-year record of 30 m resolution images and 16-day revisits, the Landsat satellite series is ideal for producing long-term records of remotely sensed phenology to build understanding of how climate affects crop growth. However, the time-series of Landsat images exhibits gaps caused by cloud cover, which is common in wet periods when crops reach maximum growth. We propose a novel spatial–temporal approach to gap-filling that avoids data fusion. Crop growth curve estimation is used to perform temporal smoothing and incorporation of spatial weights allows spatial smoothing. We tested our approach using Landsat NDVI data acquired for an 8000 ha study area in Western Australia using a train/test approach where 157 available Landsat-7 images between 2013 and 2019 were used to train the model, and 95 at least 80% cloud-free Landsat-8 images from the same period were used to test its performance. We found that compared to nonspatial estimation, use of spatial weights in growth curve estimation improved correlation between observed and predicted NDVI by 75%, MAE by 31% and RMSE by 75%. For cropland, the correlation is improved by 58%, the MAE by 36% and the RMSE by 76%. We conclude that spatially weighted estimation of crop growth curves can be used to fill spatial and temporal gaps in Landsat NDVI for the purpose of within-field monitoring. Our approach is also applicable to other data sources and vegetation indices.
- 28 May 2021
- Published by MDPI AG in Remote Sensing
- Vol. 13 (11) , 2128
Open AccessSpatially Weighted Estimation of Broadacre Crop Growth Improves Gap-Filling of Landsat NDVI
Seasonal climate is the main driver of crop growth and yield in broadacre grain cropping systems. With a 40-year record of 30 m resolution images and 16-day revisits, the Landsat satellite series is ideal for producing long-term records of remotely sensed phenology to build understanding of how climate affects crop growth. However, the time-series of Landsat images exhibits gaps caused by cloud cover, which is common in wet periods when crops reach maximum growth. We propose a novel spatial–temporal approach to gap-filling that avoids data fusion. Crop growth curve estimation is used to perform temporal smoothing and incorporation of spatial weights allows spatial smoothing. We tested our approach using Landsat NDVI data acquired for an 8000 ha study area in Western Australia using a train/test approach where 157 available Landsat-7 images between 2013 and 2019 were used to train the model, and 95 at least 80% cloud-free Landsat-8 images from the same period were used to test its performance. We found that compared to nonspatial estimation, use of spatial weights in growth curve estimation improved correlation between observed and predicted NDVI by 75%, MAE by 31% and RMSE by 75%. For cropland, the correlation is improved by 58%, the MAE by 36% and the RMSE by 76%. We conclude that spatially weighted estimation of crop growth curves can be used to fill spatial and temporal gaps in Landsat NDVI for the purpose of within-field monitoring. Our approach is also applicable to other data sources and vegetation indices.
- 31 August 2019
- Published by Elsevier in Ecological Indicators
- Vol. 108, 105669
Spatial pattern and seasonal dynamics of the photosynthesis activity across Australian rainfed croplands
- 31 August 2019
- Published by Elsevier in Ecological Indicators
- Vol. 108, 105669
Spatial pattern and seasonal dynamics of the photosynthesis activity across Australian rainfed croplands
- Open Access
- 1 February 2018
- Published by Elsevier in Agriculture, Ecosystems & Environment
- Vol. 254, 99-110
Diverse sensitivity of winter crops over the growing season to climate and land surface temperature across the rainfed cropland-belt of eastern Australia
- 1 February 2018
- Published by Elsevier in Agriculture, Ecosystems & Environment
- Vol. 254, 99-110
Open AccessDiverse sensitivity of winter crops over the growing season to climate and land surface temperature across the rainfed cropland-belt of eastern Australia
- 3 November 2016
- Published by Institute of Electrical and Electronics Engineers (IEEE)
- Vol. 17, 6296-6299
Climate impacts on wheat phenology and production using mutisource data in NSW, Australia
Wheat is the most important grain crop in Australia, which plays a significant role in world grain-trading market. However, climate warming, water shortage, as well as more frequent extreme weather events (e.g., heatwaves, droughts and floods), under pressure of food demand, would pose great risks to all aspects of wheat production worldwide, especially in Australia with high climate variability. This study aggregated multi-source observational data by using meteorological statistics, in-situ investigation data and the MODIS Enhanced Vegetation Index (EVI) product to explore and examine the correlation between climate variability and spatial-temporal patterns of wheat phenology metrics and productivity. The results from tests over 370 wheat trial sites showed: 1) narrower and earlier sowing and harvesting windows occurred in a drought year (2006) compared with a normal year (2005). Differences in sowing and harvesting window lengths were 9 and 5 days, respectively; 2) different weather patterns in each agro-climatic zone were followed by different remotely sensed crop EVI seasonality profiles. Crop growth was least affected by climate variability in agro-climate region E2, which is located in the south part of study area. This study reveals new information on cropland-climate relationships across the wheat belt in NSW in a changing climate.
- 3 November 2016
- Published by Institute of Electrical and Electronics Engineers (IEEE)
- Vol. 17, 6296-6299
Climate impacts on wheat phenology and production using mutisource data in NSW, Australia
Wheat is the most important grain crop in Australia, which plays a significant role in world grain-trading market. However, climate warming, water shortage, as well as more frequent extreme weather events (e.g., heatwaves, droughts and floods), under pressure of food demand, would pose great risks to all aspects of wheat production worldwide, especially in Australia with high climate variability. This study aggregated multi-source observational data by using meteorological statistics, in-situ investigation data and the MODIS Enhanced Vegetation Index (EVI) product to explore and examine the correlation between climate variability and spatial-temporal patterns of wheat phenology metrics and productivity. The results from tests over 370 wheat trial sites showed: 1) narrower and earlier sowing and harvesting windows occurred in a drought year (2006) compared with a normal year (2005). Differences in sowing and harvesting window lengths were 9 and 5 days, respectively; 2) different weather patterns in each agro-climatic zone were followed by different remotely sensed crop EVI seasonality profiles. Crop growth was least affected by climate variability in agro-climate region E2, which is located in the south part of study area. This study reveals new information on cropland-climate relationships across the wheat belt in NSW in a changing climate.
- Open Access
- 1 October 2015
- Published by Elsevier in Ecotoxicology and Environmental Safety
- Vol. 120, 184-192
Subcellular cadmium distribution and antioxidant enzymatic activities in the leaves of two castor ( Ricinus communis L.) cultivars exhibit differences in Cd accumulation
- 1 October 2015
- Published by Elsevier in Ecotoxicology and Environmental Safety
- Vol. 120, 184-192
Open AccessSubcellular cadmium distribution and antioxidant enzymatic activities in the leaves of two castor ( Ricinus communis L.) cultivars exhibit differences in Cd accumulation
- 1 April 2014
- Published by Elsevier in Energy Policy
- Vol. 67, 508-516
Emergy evaluation of agricultural sustainability of Northwest China before and after the grain-for-green policy
- 1 April 2014
- Published by Elsevier in Energy Policy
- Vol. 67, 508-516
Emergy evaluation of agricultural sustainability of Northwest China before and after the grain-for-green policy