Kelly M. Diamond

As animals develop, demands on their physical form often change in response to ecological pressures. Structures associated with locomotion and habitat use can be particularly affected. Due to their smaller size, juvenile animals are often under selection to evade a larger and more diverse set of predators compared to adults of the same species. Adult Desert Horned Lizards, Phrynosoma platyrhinos, use a dorsoventral “shielding” as an anti-predator strategy to gape-limit potential predators. Because this strategy is likely size-dependent, we anticipated that juvenile lizards likely use different anti-predator strategies that would result in differences in habitat use, sprint performance, and morphology between age groups. We found differences in sprint speed and morphology, but not habitat use. Juvenile lizards had proportionally longer forelimbs and faster relative sprint speeds, potentially making juveniles more maneuverable than adults, though more work is needed to confirm this relationship. Our results suggest that selection for shielding behavior may constrain body shape throughout development, while shifts in limb lengths during development can enable juvenile lizards to evade their wider set of potential predators.

Synopsis: Many animals migrate across regions of their geographic range as part of extended events, with groups of individuals proceeding through areas of travel on several successive days. Early migrating individuals may have an advantage over late migrating individuals by gaining early access to the resources at the eventual destination. For situations where early access to resources would provide an advantage, specific sets of locomotor traits might be found among individuals that are earlier migrators. We tested for associations between migration timing and traits related to escape responses, climbing, and morphology in the amphidromous Hawaiian stream goby, ‘o‘opu nōpili (Sicyopterus stimpsoni). In this species, juvenile fish migrate in pulses over several days immediately following flash floods. We collected daily measurements of escape responses and waterfall climbing from juvenile fish arriving at streams from the ocean. We found that escape performance showed mainly stochastic variation across migrating individuals tested on successive days. In contrast, some metrics of climbing performance decrease over successive pulses during a migration event. We also found more variation in body shape among fish from early pulses during migration events compared to later in pulses. These results could have implications for guiding conservation efforts, identifying critical time windows for protection as periods with the greatest likelihood of successful migrants.

Movement is an important characteristic of an animal's ecology, reflecting the perception of and response to environmental conditions. To effectively search for food, movement patterns likely depend on habitat characteristics and the sensory systems used to find prey. We examined movements associated with foraging for two sympatric species of lizards inhabiting the Great Basin Desert of southeastern Oregon. The two species have largely overlapping diets but find prey via different sensory cues, which link to their differing foraging strategies—the long‐nosed leopard lizard, Gambelia wislizenii, is a visually‐oriented predator, while the western whiptail, Aspidoscelis tigris, relies more heavily on chemosensory cues to find prey. Using detailed focal observations, we characterized the habitat use and movement paths of each species. We placed markers at the location of focal animals every minute for the duration of each 30‐min observation. Afterward, we recorded whether each location was in the open or in vegetation, as well as the movement metrics of step length, path length, net displacement, straightness index, and turn angle, and then made statistical comparisons between the two species. The visual forager spent more time in open areas, moved less frequently over shorter distances, and differed in patterns of plant use compared to the chemosensory forager. Path characteristics of step length and turn angle differed between species. The visual predator moved in a way that was consistent with the notion that they require a clear visual path to stalk prey whereas the movement of the chemosensory predator increased their chances of detecting prey by venturing further into vegetation. Sympatric species can partition limited resources through differences in search behavior and habitat use.

Across vertebrate diversity, limb bone morphology is typically expected to reflect differences in the habitats and functional tasks that species utilize. Arboreal vertebrates are often recognized to have longer limbs than terrestrial relatives, a feature thought to help extend the reach of limbs across gaps between branches. Among terrestrial vertebrates, longer limbs can experience greater bending moments that might expose bones to a greater risk of failure. However, changes in habitat or behavior can impose changes in the forces that bones experience. If locomotion imposed lower loads in trees than on the ground, such a release from loading demands might have produced conditions under which potential constraints on the evolution of long limbs were removed, making it easier for them to evolve in arboreal species. We tested for such environmental differences in limb bone loading using the green iguana (Iguana iguana), a species that readily walks over ground and climbs trees. We implanted strain gauges on the humerus and femur, and then compared loads between treatments modeling substrate conditions of arboreal habitats. For hindlimbs, inclined substrate angles were most correlated with strain increases, whereas the forelimbs had a similar pattern but of lesser magnitude. Unlike some other habitat transitions, these results do not support biomechanical release as a mechanism likely to have facilitated limb elongation. Instead, limb bone adaptations in arboreal habitats were likely driven by selective pressures other than responses to skeletal loading.

The functional capacities of animals are a primary factor determining survival in nature. In this context, understanding the biomechanical performance of animals can provide insight into diverse aspects of their biology, ranging from ecological distributions across habitat gradients to the evolutionary diversification of lineages. To survive and reproduce in the face of environmental pressures, animals must perform a wide range of tasks, some of which entail tradeoffs between competing demands. Moreover, the demands encountered by animals can change through ontogeny as they grow, sexually mature or migrate across environmental gradients. To understand how mechanisms that underlie functional performance contribute to survival and diversification across challenging and variable habitats, we have pursued diverse studies of the comparative biomechanics of amphidromous goby fishes across functional requirements ranging from prey capture and fast-start swimming to adhesion and waterfall climbing. The pan-tropical distribution of these fishes has provided opportunities for repeated testing of evolutionary hypotheses. By synthesizing data from the lab and field, across approaches spanning high-speed kinematics, selection trials, suction pressure recordings, mechanical property testing, muscle fiber-type measurements and physical modeling of bioinspired designs, we have clarified how multiple axes of variation in biomechanical performance associate with the ecological and evolutionary diversity of these fishes. Our studies of how these fishes meet both common and extreme functional demands add new, complementary perspectives to frameworks developed from other systems, and illustrate how integrating knowledge of the mechanical underpinnings of diverse aspects of performance can give critical insights into ecological and evolutionary questions.

Genetic diseases affecting the skeletal system present with a wide range of symptoms that make diagnosis and treatment difficult. Genome‐wide association and sequencing studies have identified genes linked to human skeletal diseases. Gene editing of zebrafish models allows researchers to further examine the link between genotype and phenotype, with the long‐term goal of improving diagnosis and treatment. While current automated tools enable rapid and in‐depth phenotyping of the axial skeleton, characterizing the effects of mutations on the craniofacial skeleton has been more challenging. The objective of this study was to evaluate a semi‐automated screening tool can be used to quantify craniofacial variations in zebrafish models using four genes that have been associated with human skeletal diseases (meox1, plod2, sost, and wnt16) as test cases. We used traditional landmarks to ground truth our dataset and pseudolandmarks to quantify variation across the 3D cranial skeleton between the groups (somatic crispant, germline mutant, and control fish). The proposed pipeline identified variation between the crispant or mutant fish and control fish for four genes. Variation in phenotypes parallel human craniofacial symptoms for two of the four genes tested. This study demonstrates the potential as well as the limitations of our pipeline as a screening tool to examine multi‐dimensional phenotypes associated with the zebrafish craniofacial skeleton.

Genetic diseases affecting the skeletal system present with a wide range of symptoms that make diagnosis and treatment difficult. Genome-wide association and sequencing studies have identified genes linked to human skeletal diseases. Gene editing of zebrafish models allows researchers to further examine the link between genotype and phenotype, with the long-term goal of improving diagnosis and treatment. While current automated tools enable rapid and in-depth phenotyping of the axial skeleton, characterizing the effects of mutations on the craniofacial skeleton has been more challenging. The objective of this study was to evaluate a semi-automated screening tool can be used to quantify craniofacial variations in zebrafish models using four genes that have been associated with human skeletal diseases ( meox1, plod2, sost , and wnt16 ) as test cases. We used traditional landmarks to ground truth our dataset and pseudolandmarks to quantify variation across the 3D cranial skeleton between the groups (somatic crispant, germline mutant, and control fish). The proposed pipeline identified variation between the crispant or mutant fish and control fish for four genes. Variation in phenotypes parallel human craniofacial symptoms for two of the four genes tested. This study demonstrates the potential as well as the limitations of our pipeline as a screening tool to examine multi-dimensional phenotypes associated with the zebrafish craniofacial skeleton.

Due to the complexity of fish skulls, previous attempts to classify craniofacial phenotypes have relied on qualitative features or sparce 2D landmarks. In this work we aim to identify previously unknown 3D craniofacial phenotypes with a semiautomated pipeline in adult zebrafish mutants. We first estimate a synthetic ‘normative’ zebrafish template using MicroCT scans from a sample pool of wild-type animals using the Advanced Normalization Tools (ANTs). We apply a computational anatomy (CA) approach to quantify the phenotype of zebrafish with disruptions in bmp1a, a gene implicated in later skeletal development and whose human ortholog when disrupted is associated with Osteogenesis Imperfecta. Compared to controls, the bmp1a fish have larger otoliths, larger normalized centroid sizes, and exhibit shape differences concentrated around the operculum, anterior frontal, and posterior parietal bones. Moreover, bmp1a fish differ in the degree of asymmetry. Our CA approach offers a potential pipeline for high-throughput screening of complex fish craniofacial shape to discover novel phenotypes for which traditional landmarks are too sparce to detect. The current pipeline successfully identifies areas of variation in zebrafish mutants, which are an important model system for testing genome to phenome relationships in the study of development, evolution, and human diseases. This article has an associated First Person interview with the first author of the paper.

Freshwater streams on oceanic islands serve critical ecological and economic functions. However, these are underrepresented in assessments of pollution from contaminants of emerging concern (CEC). Furthermore, freshwater streams and their endemic fauna often have characteristics that are distinct from those of continental streams and model species, calling extrapolations from studies of such systems into question for island streams. In the current study, we assessed the presence of CEC across three sampling events and five freshwater streams on the Island of Hawai’i. We also exposed juveniles of the native fish species Sicyopterus stimpsoni to a mixture of commonly co-occurring CEC for 96 h in static renewal experiments, testing for impacts of CEC in two ecologically relevant assays of functional performance. CEC from multiple sources were ubiquitous in Hawaiian streams, including human-use pharmaceuticals, agricultural herbicides, and industrial runoff. Concentrations of CEC were comparable to published studies from continental streams, exceeding total concentrations of 1000 ng/L for the eight quantified CEC in four samples, and approaching 2500 ng/L in one sample. Effects on exposed fish were subtle and limited to treatments with higher CEC concentrations but indicated potential impacts of CEC on locomotor performance. These results indicate that Hawaiian streams follow a global trend of widespread freshwater pollution by CEC that are accompanied by subtle effects on native fish species and highlight the need for the inclusion of endemic species and ecologically relevant assays when assessing the effects of contaminants in island habitats.

Relationships between body shape and escape performance are well established for many species. However, organisms can face multiple selection pressures that might impose competing demands. Many fishes use fast starts for escaping predator attacks, whereas some species of gobiid fishes have evolved the ability to climb waterfalls out of predator-dense habitats. The ancestral ‘powerburst’ climbing mechanism uses lateral body undulations to move up waterfalls, whereas a derived ‘inching’ mechanism uses rectilinear locomotion. We examined whether fast-start performance is impacted by selection imposed from the new functional demands of climbing. We predicted that non-climbing species would show morphology and fast-start performance that facilitate predator evasion, because these fish live consistently with predators and are not constrained by the demands of climbing. We also predicted that, by using lateral undulations, powerburst climbers would show escape performance superior to that of inchers. We compared fast starts and body shape across six goby species. As predicted, non-climbing fish exhibited distinct morphology and responded more frequently to an attack stimulus than climbing species. Contrary to our predictions, we found no differences in escape performance among climbing styles. These results indicate that selection for a competing pressure need not limit the ability of prey to escape predator attacks.