Jiangfeng Fan
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Jiangfeng Fan has a total of 50 co-authors. Here are the top co-authors by number of shared publications:
- Sijiu Yu
College of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China
5 shared publications - Yan Cui
College of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China
4 shared publications Gengquan Xu
Technology and Research Center of Gansu Province for Embryonic Engineering of Bovine and Sheep & Goat Lanzhou China
2 shared publications- Gengquan Xu
Technology and Research Center of Gansu Province for Embryonic Engineering of Bovine and Sheep & Goat, Lanzhou 730070, China
2 shared publications Honghong He
College of Veterinary Medicine Gansu Agricultural University Lanzhou China
2 shared publications- Honghong He
Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization Key Laboratory of Sichuan Province, Southwest Minzu University
2 shared publications
Latest Publications
- Open Access
- 18 September 2026
- Published by MDPI AG in Microorganisms
- Vol. 14 (9) , 2091
Yeast Culture Alleviates High-Concentrate Diet-Induced Rumen Fermentation Disturbances and Modulates the Rumen Microbiota and Metabolome in Lambs
This study evaluated whether yeast culture (YC) supplementation could alleviate rumen disturbances induced by a high-concentrate diet in lambs. Forty-five three-month-old Du × Han F1 male lambs were assigned to control (CON), high-concentrate (HC), or HC supplemented with 0.5% YC groups (n = 15 each) for 60 days; six lambs per group were sampled for serum biochemistry, rumen fermentation, 16S rRNA gene sequencing, and untargeted metabolomics. Compared with CON, HC markedly reduced rumen pH (6.55 vs. 5.52) and the acetate-to-propionate ratio (2.67 vs. 1.31), whereas YC increased these values to 6.32 and 2.35, respectively (p < 0.05). YC also increased acetate and butyrate concentrations and reduced propionate relative to HC, while serum ALT returned to a level comparable to CON. YC partially reversed these fermentation changes and restored serum ALT to CON-comparable levels. YC also increased the Shannon index relative to HC and showed features relative to CON. LEfSe identified g__Mitsuokella, g__Megasphaera_A_38685, g__Succiniclasticum, g__Parafannyhessea, and g__CAG-269 as candidate YC-responsive genera. Metabolomics identified 188 and 436 differential metabolites in CON versus HC and HC versus YC, respectively, mainly involving amino acid and cofactor metabolism. Several metabolites shifted toward CON levels, and correlation analysis linked candidate genera and metabolites with rumen fermentation and selected serum biochemical parameters. Overall, 0.5% YC partially alleviated high-concentrate diet-induced rumen acidification and was associated with improved microbial and metabolic homeostasis.
- 18 September 2026
- Published by MDPI AG in Microorganisms
- Vol. 14 (9) , 2091
Open AccessYeast Culture Alleviates High-Concentrate Diet-Induced Rumen Fermentation Disturbances and Modulates the Rumen Microbiota and Metabolome in Lambs
This study evaluated whether yeast culture (YC) supplementation could alleviate rumen disturbances induced by a high-concentrate diet in lambs. Forty-five three-month-old Du × Han F1 male lambs were assigned to control (CON), high-concentrate (HC), or HC supplemented with 0.5% YC groups (n = 15 each) for 60 days; six lambs per group were sampled for serum biochemistry, rumen fermentation, 16S rRNA gene sequencing, and untargeted metabolomics. Compared with CON, HC markedly reduced rumen pH (6.55 vs. 5.52) and the acetate-to-propionate ratio (2.67 vs. 1.31), whereas YC increased these values to 6.32 and 2.35, respectively (p < 0.05). YC also increased acetate and butyrate concentrations and reduced propionate relative to HC, while serum ALT returned to a level comparable to CON. YC partially reversed these fermentation changes and restored serum ALT to CON-comparable levels. YC also increased the Shannon index relative to HC and showed features relative to CON. LEfSe identified g__Mitsuokella, g__Megasphaera_A_38685, g__Succiniclasticum, g__Parafannyhessea, and g__CAG-269 as candidate YC-responsive genera. Metabolomics identified 188 and 436 differential metabolites in CON versus HC and HC versus YC, respectively, mainly involving amino acid and cofactor metabolism. Several metabolites shifted toward CON levels, and correlation analysis linked candidate genera and metabolites with rumen fermentation and selected serum biochemical parameters. Overall, 0.5% YC partially alleviated high-concentrate diet-induced rumen acidification and was associated with improved microbial and metabolic homeostasis.
- Open Access
- 2 May 2026
- Published by Springer Nature in Journal of Ovarian Research
- Vol. 19 (1)
Vitamin E alleviates energy stress-induced injury in yak granulosa cells by blocking the AMPK/mTOR-mitophagy-ferroptosis axis
Energy stress-induced dysfunction of granulosa cells (GCs) is a major etiological factor in diminished female reproductive performance. Although vitamin E
- 2 May 2026
- Published by Springer Nature in Journal of Ovarian Research
- Vol. 19 (1)
Open AccessVitamin E alleviates energy stress-induced injury in yak granulosa cells by blocking the AMPK/mTOR-mitophagy-ferroptosis axis
Energy stress-induced dysfunction of granulosa cells (GCs) is a major etiological factor in diminished female reproductive performance. Although vitamin E
- Open Access
- 1 January 2025
- Published by FapUNIFESP (SciELO) in Animal Reproduction
- Vol. 22 (4) , e20250006
Prokaryotic expression, polyclonal antibody production, and application of yak TGF-β2
This study aimed to generate yak-specific polyclonal antibodies against transforming growth factor beta 2 (TGF-β2). Specific primers targeting the TGF-β2 coding sequence (CDS) were designed, and the gene was amplified via RT-PCR. The amplified product was cloned into the pET-32a(+) vector to construct the recombinant plasmid pET-32a(+)-TGF-β2. This plasmid was transformed into Escherichia coli BL21(DE3) for protein expression. Isopropyl β-D-1-thiogalactopyranoside (IPTG) induced TGF-β2 production, and the recombinant protein was purified. New Zealand rabbits were immunized with the purified protein to generate polyclonal antibodies. Polyclonal antibody titers were determined using ELISA, while specificity was assessed through Western blot and immunohistochemistry. The recombinant plasmid was successfully constructed, and IPTG induction yielded a 63 kDa protein. Optimal expression occurred at 25 °C with 0.5 mmol·L−1 IPTG and a 10-hour induction period. ELISA confirmed an antibody titer of 1:106. Western blot and immunohistochemistry demonstrated TGF-β2 expression in female yak ovaries, oviducts, and uteri across reproductive stages, with significantly elevated ovarian levels during pregnancy. This study successfully produced and validated a highly specific anti-yak TGF-β2 polyclonal antibody, providing a vital tool for investigating its role in yak reproductive physiology.
- 1 January 2025
- Published by FapUNIFESP (SciELO) in Animal Reproduction
- Vol. 22 (4) , e20250006
Open AccessProkaryotic expression, polyclonal antibody production, and application of yak TGF-β2
This study aimed to generate yak-specific polyclonal antibodies against transforming growth factor beta 2 (TGF-β2). Specific primers targeting the TGF-β2 coding sequence (CDS) were designed, and the gene was amplified via RT-PCR. The amplified product was cloned into the pET-32a(+) vector to construct the recombinant plasmid pET-32a(+)-TGF-β2. This plasmid was transformed into Escherichia coli BL21(DE3) for protein expression. Isopropyl β-D-1-thiogalactopyranoside (IPTG) induced TGF-β2 production, and the recombinant protein was purified. New Zealand rabbits were immunized with the purified protein to generate polyclonal antibodies. Polyclonal antibody titers were determined using ELISA, while specificity was assessed through Western blot and immunohistochemistry. The recombinant plasmid was successfully constructed, and IPTG induction yielded a 63 kDa protein. Optimal expression occurred at 25 °C with 0.5 mmol·L−1 IPTG and a 10-hour induction period. ELISA confirmed an antibody titer of 1:106. Western blot and immunohistochemistry demonstrated TGF-β2 expression in female yak ovaries, oviducts, and uteri across reproductive stages, with significantly elevated ovarian levels during pregnancy. This study successfully produced and validated a highly specific anti-yak TGF-β2 polyclonal antibody, providing a vital tool for investigating its role in yak reproductive physiology.
- Open Access
Expression of Key Factors of the Hippo Signaling Pathway in Yak (Bos grunniens) Mammary Gland
Due to its rich nutritional value, yak milk is an important food source in the alpine pastoral areas. However, yaks have a low milk yield. The Hippo pathway participates in cell proliferation and organ development. We aimed to determine the regulatory mechanism of this pathway in yak mammary cells. A greater understanding of how the expression of its essential genes influence the reproductive cycle could lead to improvements in lactation performance. The expression levels of the key genes MST1, LATS1, YAP1, and TEAD1 were detected by quantitative real-time PCR, Western blotting, and immunohistochemistry during the growth, lactation, and dry periods (GP, LP and DP, respectively). The MST1 and LATS1 mRNA and protein expression level was highest during GP and lowest during LP. The YAP1 and TEAD1 mRNA and protein expression level decreased from GP to LP and DP. MST1 and LATS1 were expressed in the cytoplasm whereas YAP1 and TEAD1 were expressed in the nucleus and cytoplasm, respectively. The differential expression of MST1, LATS1, YAP1, and TEAD1 expression in the yak mammary gland during different developmental stages strongly suggests that they play an important role in the regulation of developmental functions under different physiological conditions.
Open AccessExpression of Key Factors of the Hippo Signaling Pathway in Yak (Bos grunniens) Mammary Gland
Due to its rich nutritional value, yak milk is an important food source in the alpine pastoral areas. However, yaks have a low milk yield. The Hippo pathway participates in cell proliferation and organ development. We aimed to determine the regulatory mechanism of this pathway in yak mammary cells. A greater understanding of how the expression of its essential genes influence the reproductive cycle could lead to improvements in lactation performance. The expression levels of the key genes MST1, LATS1, YAP1, and TEAD1 were detected by quantitative real-time PCR, Western blotting, and immunohistochemistry during the growth, lactation, and dry periods (GP, LP and DP, respectively). The MST1 and LATS1 mRNA and protein expression level was highest during GP and lowest during LP. The YAP1 and TEAD1 mRNA and protein expression level decreased from GP to LP and DP. MST1 and LATS1 were expressed in the cytoplasm whereas YAP1 and TEAD1 were expressed in the nucleus and cytoplasm, respectively. The differential expression of MST1, LATS1, YAP1, and TEAD1 expression in the yak mammary gland during different developmental stages strongly suggests that they play an important role in the regulation of developmental functions under different physiological conditions.
- 24 July 2020
- Published by Wiley in Reproduction in Domestic Animals
- Vol. 55 (10) , 1371-1382
The expression of hypoxia‐inducible factor‐1 alpha in primary reproductive organs of the female yak (Bos grunniens) at different reproductive stages
The yak (Bos grunniens) is the most important livestock animal in high‐altitude regions owing to its prominent adaptability to cold conditions, nutritional deficiencies and hypoxia. The reproductive organs exhibit different histological appearances and physiological processes at different reproductive stages. Hypoxia‐inducible factor‐1 alpha (HIF‐1α) is the regulatory subunit of HIF‐1 that crucially regulates the response to hypoxia in mammalian organisms. The goal of our study was to investigate the expression and distribution of HIF‐1α in the primary yak reproductive organs at different reproductive stages. Samples of the ovary, oviduct and uterus of 15 adult female yaks were collected and used in the experiment. The expression and localization of HIF‐1α proteins and mRNA were investigated using quantitative real‐time polymerase chain reaction (qRT‐PCR), Western blot (WB) and immunohistochemistry (IHC). The results indicated that the expression of HIF‐1α protein in the ovary was higher during the luteal phase than during the follicular phase and gestation period (p < .05). In the oviduct, HIF‐1α protein was also more highly expressed during the luteal phase than during the follicular phase and gestation period (p < .01). However, in the uterus, the HIF‐1α protein had stronger expression during the gestation period than during the follicular phase (p < .01) and luteal phase (p < .05). The expression of HIF‐1α mRNA was similar to that of its protein. Immunohistochemical analysis revealed intense immunostaining of HIF‐1α proteins in the follicular granulosa cells, granular luteal cells, villous epithelial cells of the oviduct, endometrial glandular epithelium and luminal epithelium, foetal villous trophoblast, and epithelia of caruncular crypts. This study showed that the expression of HIF‐1α in the ovary, oviduct and uterus varies according to the stage of the reproductive cycle. This implies that HIF‐1α plays an important role in regulating the stage‐specific physiological function of yak reproductive organs under hypoxic environments.
- 24 July 2020
- Published by Wiley in Reproduction in Domestic Animals
- Vol. 55 (10) , 1371-1382
The expression of hypoxia‐inducible factor‐1 alpha in primary reproductive organs of the female yak (Bos grunniens) at different reproductive stages
The yak (Bos grunniens) is the most important livestock animal in high‐altitude regions owing to its prominent adaptability to cold conditions, nutritional deficiencies and hypoxia. The reproductive organs exhibit different histological appearances and physiological processes at different reproductive stages. Hypoxia‐inducible factor‐1 alpha (HIF‐1α) is the regulatory subunit of HIF‐1 that crucially regulates the response to hypoxia in mammalian organisms. The goal of our study was to investigate the expression and distribution of HIF‐1α in the primary yak reproductive organs at different reproductive stages. Samples of the ovary, oviduct and uterus of 15 adult female yaks were collected and used in the experiment. The expression and localization of HIF‐1α proteins and mRNA were investigated using quantitative real‐time polymerase chain reaction (qRT‐PCR), Western blot (WB) and immunohistochemistry (IHC). The results indicated that the expression of HIF‐1α protein in the ovary was higher during the luteal phase than during the follicular phase and gestation period (p < .05). In the oviduct, HIF‐1α protein was also more highly expressed during the luteal phase than during the follicular phase and gestation period (p < .01). However, in the uterus, the HIF‐1α protein had stronger expression during the gestation period than during the follicular phase (p < .01) and luteal phase (p < .05). The expression of HIF‐1α mRNA was similar to that of its protein. Immunohistochemical analysis revealed intense immunostaining of HIF‐1α proteins in the follicular granulosa cells, granular luteal cells, villous epithelial cells of the oviduct, endometrial glandular epithelium and luminal epithelium, foetal villous trophoblast, and epithelia of caruncular crypts. This study showed that the expression of HIF‐1α in the ovary, oviduct and uterus varies according to the stage of the reproductive cycle. This implies that HIF‐1α plays an important role in regulating the stage‐specific physiological function of yak reproductive organs under hypoxic environments.
- Open Access
The Expression of ERK1/2 in Female Yak (Bos grunniens) Reproductive Organs
The main reproductive organs undergo different histological appearances and physiological processes under different reproductive statuses. The variation of these organs depends on a delicate regulation of cell proliferation, differentiation, and apoptosis. Extracellular signal-regulated kinases1/2 (ERK1/2) are members of the mitogen-activated protein kinase (MAPK) super family. They have important roles in regulating various biological processes of different cells, tissues, and organ types. Activated ERK1/2 generally promotes cell survival, but under certain conditions, ERK1/2 also have the function of inducing apoptosis. It is widely believed that ERK1/2 play a significant role in regulating the reproductive processes of mammals. The goal of our research is to investigate the expression and distribution of ERK1/2 in the yak’s main reproductive organs during different stages. In the present study, samples of the ovary, oviduct, and uterus of 15 adult female yak were collected and used in the experiment. The ERK1/2 proteins, localization, and quantitative expression of their mRNA were investigated using immunohistochemistry (IHC), western blot (WB) and relative quantitative real-time polymerase chain reaction (RT-PCR). The results indicated that ERK1/2 proteins and their mRNA were highly expressed in the ovary of the luteal phase and gestation period, in the oviduct of the luteal phase, and in the uterus of the luteal phase and gestation period. Immunohistochemical analysis revealed a strong distribution of ERK1/2 proteins in follicular granulosa cells, granular luteal cells, villous epithelial cells of the oviduct, endometrial glandular epithelium, and luminal epithelium. These results demonstrated that the expression of ERK1 and ERK2 proteins and their mRNA in the yak’s ovary, oviduct, and uterus varies with the stage of the reproductive cycle. The variation character of ERK1 and ERK 2 expression in the yak’s main reproductive organs during different stages implies that they play an important role in regulating the reproductive function under different physiological statuses.
Open AccessThe Expression of ERK1/2 in Female Yak (Bos grunniens) Reproductive Organs
The main reproductive organs undergo different histological appearances and physiological processes under different reproductive statuses. The variation of these organs depends on a delicate regulation of cell proliferation, differentiation, and apoptosis. Extracellular signal-regulated kinases1/2 (ERK1/2) are members of the mitogen-activated protein kinase (MAPK) super family. They have important roles in regulating various biological processes of different cells, tissues, and organ types. Activated ERK1/2 generally promotes cell survival, but under certain conditions, ERK1/2 also have the function of inducing apoptosis. It is widely believed that ERK1/2 play a significant role in regulating the reproductive processes of mammals. The goal of our research is to investigate the expression and distribution of ERK1/2 in the yak’s main reproductive organs during different stages. In the present study, samples of the ovary, oviduct, and uterus of 15 adult female yak were collected and used in the experiment. The ERK1/2 proteins, localization, and quantitative expression of their mRNA were investigated using immunohistochemistry (IHC), western blot (WB) and relative quantitative real-time polymerase chain reaction (RT-PCR). The results indicated that ERK1/2 proteins and their mRNA were highly expressed in the ovary of the luteal phase and gestation period, in the oviduct of the luteal phase, and in the uterus of the luteal phase and gestation period. Immunohistochemical analysis revealed a strong distribution of ERK1/2 proteins in follicular granulosa cells, granular luteal cells, villous epithelial cells of the oviduct, endometrial glandular epithelium, and luminal epithelium. These results demonstrated that the expression of ERK1 and ERK2 proteins and their mRNA in the yak’s ovary, oviduct, and uterus varies with the stage of the reproductive cycle. The variation character of ERK1 and ERK 2 expression in the yak’s main reproductive organs during different stages implies that they play an important role in regulating the reproductive function under different physiological statuses.
- Open Access
- 2 May 2019
- Published by Springer Nature in Virology Journal
- Vol. 16 (1) , 56
First detection and genetic characterization of ungulate tetraparvovirus 2 and ungulate tetraparvovirus 4 in special livestock on the Qinghai-Tibet Plateau in China
Tetraparvovirus, formerly known as Partetravirus, is a newly discovered genus in the family Parvoviridae that is considered phylogenetically distinct from other parvoviruses. However, nothing is known about the prevalence of Tetraparvovirus in special livestock living on the Qinghai-Tibet Plateau of China, such as Tibetan pigs and Tibetan sheep. A pair of special primers was designed based on the conserved regions in the genome of ungulate tetraparvovirus 2 (P-PARV4) and ungulate tetraparvovirus 4 (O-PARV4) and was used to detect P-PARV4 in domestic pigs and Tibetan pigs and O-PARV4 in ovines and Tibetan sheep. The results showed a 15.59 and 9.38% prevalence of P-PARV4 in domestic pigs (18.96% in Gansu Province and 11.76% in Qinghai Province) and Tibetan pigs (14.28% in Gansu Province and 4.44% in Qinghai Province), respectively, and a 7.31 and 5.20% prevalence of O-PARV4 in ovines (6.61% in Gansu Province and 8.00% in Qinghai Province) and Tibetan sheep (4.55% in Gansu Province and 5.50% in Qinghai Province), respectively. The prevalence of P-PARV4 was 14.76% (31/210) for ≤1-month-old pigs and 10.58% (20/189) for > 1-month-old pigs, and the positive rates of O-PARV4 were 7.65% (18/235) for ≤1-month-old sheep and 5.05% (11/218) for > 1-month-old sheep. The phylogenetic analysis of NS1, VP1, VP2 and the whole PARV4-related provirus genome demonstrated that both P-PARV4 and O-PARV4 sequences in this study were more closely related to the sequences of other strains discovered in the same genus of animals. The identity analyses for the full-length VP2 genomes of O-PARV4 revealed 98.84–100.00% sequence identity among the 7 strains and the previously reported strain, which was 98.60–99.28% for P-PARV4. In the present study, for the first time, we have provided comprehensive information regarding the widespread infection of P-PARV4 and O-PARV4 in special livestock on the Qinghai-Tibet Plateau in China. Our present findings highlight the importance of epidemiologic surveillance to limit the spread of Tetraparvovirus in livestock at high altitudes in China.
- 2 May 2019
- Published by Springer Nature in Virology Journal
- Vol. 16 (1) , 56
Open AccessFirst detection and genetic characterization of ungulate tetraparvovirus 2 and ungulate tetraparvovirus 4 in special livestock on the Qinghai-Tibet Plateau in China
Tetraparvovirus, formerly known as Partetravirus, is a newly discovered genus in the family Parvoviridae that is considered phylogenetically distinct from other parvoviruses. However, nothing is known about the prevalence of Tetraparvovirus in special livestock living on the Qinghai-Tibet Plateau of China, such as Tibetan pigs and Tibetan sheep. A pair of special primers was designed based on the conserved regions in the genome of ungulate tetraparvovirus 2 (P-PARV4) and ungulate tetraparvovirus 4 (O-PARV4) and was used to detect P-PARV4 in domestic pigs and Tibetan pigs and O-PARV4 in ovines and Tibetan sheep. The results showed a 15.59 and 9.38% prevalence of P-PARV4 in domestic pigs (18.96% in Gansu Province and 11.76% in Qinghai Province) and Tibetan pigs (14.28% in Gansu Province and 4.44% in Qinghai Province), respectively, and a 7.31 and 5.20% prevalence of O-PARV4 in ovines (6.61% in Gansu Province and 8.00% in Qinghai Province) and Tibetan sheep (4.55% in Gansu Province and 5.50% in Qinghai Province), respectively. The prevalence of P-PARV4 was 14.76% (31/210) for ≤1-month-old pigs and 10.58% (20/189) for > 1-month-old pigs, and the positive rates of O-PARV4 were 7.65% (18/235) for ≤1-month-old sheep and 5.05% (11/218) for > 1-month-old sheep. The phylogenetic analysis of NS1, VP1, VP2 and the whole PARV4-related provirus genome demonstrated that both P-PARV4 and O-PARV4 sequences in this study were more closely related to the sequences of other strains discovered in the same genus of animals. The identity analyses for the full-length VP2 genomes of O-PARV4 revealed 98.84–100.00% sequence identity among the 7 strains and the previously reported strain, which was 98.60–99.28% for P-PARV4. In the present study, for the first time, we have provided comprehensive information regarding the widespread infection of P-PARV4 and O-PARV4 in special livestock on the Qinghai-Tibet Plateau in China. Our present findings highlight the importance of epidemiologic surveillance to limit the spread of Tetraparvovirus in livestock at high altitudes in China.
- Open Access
- 30 July 2018
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 13 (7) , e0201628
Transcriptional profiling of two different physiological states of the yak mammary gland using RNA sequencing
Yak milk is superior to common cow milk in nutrients including protein, fat and calories. However, the milk yield of the yak is very much lower compared with other dairy bovines. To understand the molecular mechanisms of lactogenesis, lactation and mammary gland development, mammary tissue samples were taken from five yaks during a dry period (DP, n = 3) and lactation period (LP, n = 2). Two types of cDNA sequence libraries that reflected the different physiological states of the mammary gland were constructed using RNA sequencing technology. After removing reads containing adapters, reads containing poly-N and low-quality reads from the raw data, 45,423,478 to 53,274,976 clean reads were obtained from these libraries. A total of 74.72% to 80.65% of the high-quality sequence reads were uniquely aligned to the BosGru v2.0 yak reference genome. Using the DESeq R package, 360 differentially expressed genes were detected between the two groups when the adjusted P value (padj < 0.05) was used as the cutoff value; this included 192 upregulated and 168 downregulated genes in the yak mammary gland tissue of the DP compared to the LP. A gene ontology analysis revealed that the most enriched GO terms were protein binding, multi-organism process, immune system and others. KEGG pathway analysis indicated that the differentially expressed genes were mostly enriched in Hippo signaling, insulin signaling, steroid biosynthesis and others. The analysis of the up- and downregulated genes provides important insights into the molecular events involved in lactogenesis, lactation and mammary gland development and will guide further research to enhance milk yield and optimize the constituents of yak milk.
- 30 July 2018
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 13 (7) , e0201628
Open AccessTranscriptional profiling of two different physiological states of the yak mammary gland using RNA sequencing
Yak milk is superior to common cow milk in nutrients including protein, fat and calories. However, the milk yield of the yak is very much lower compared with other dairy bovines. To understand the molecular mechanisms of lactogenesis, lactation and mammary gland development, mammary tissue samples were taken from five yaks during a dry period (DP, n = 3) and lactation period (LP, n = 2). Two types of cDNA sequence libraries that reflected the different physiological states of the mammary gland were constructed using RNA sequencing technology. After removing reads containing adapters, reads containing poly-N and low-quality reads from the raw data, 45,423,478 to 53,274,976 clean reads were obtained from these libraries. A total of 74.72% to 80.65% of the high-quality sequence reads were uniquely aligned to the BosGru v2.0 yak reference genome. Using the DESeq R package, 360 differentially expressed genes were detected between the two groups when the adjusted P value (padj < 0.05) was used as the cutoff value; this included 192 upregulated and 168 downregulated genes in the yak mammary gland tissue of the DP compared to the LP. A gene ontology analysis revealed that the most enriched GO terms were protein binding, multi-organism process, immune system and others. KEGG pathway analysis indicated that the differentially expressed genes were mostly enriched in Hippo signaling, insulin signaling, steroid biosynthesis and others. The analysis of the up- and downregulated genes provides important insights into the molecular events involved in lactogenesis, lactation and mammary gland development and will guide further research to enhance milk yield and optimize the constituents of yak milk.
- 1 December 2017
- Published by Elsevier in Theriogenology
- Vol. 104, 23-29
Bcl-2/Bax protein and mRNA expression in yak (Bos grunniens) placentomes
- 1 December 2017
- Published by Elsevier in Theriogenology
- Vol. 104, 23-29
Bcl-2/Bax protein and mRNA expression in yak (Bos grunniens) placentomes