Jonathan W. Bourne
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Jonathan W. Bourne has a total of 21 co-authors. Here are the top co-authors by number of shared publications:
Peter A. Torzilli
Orthopedic Soft Tissue Research Program, Hospital for Special Surgery, 535 E. 70(th) St., New York, NY, 10021, USA; Physiology, Biophysics, and Systems Biology Program (Box 75), Weill Cornell Graduate School of Medical Sciences, 1300 York Ave., New York, NY, 10065, USA
6 shared publications- Peter A. Torzilli
Orthopaedic Soft Tissue Research Program, Hospital for Special Surgery, Research Division 535, East 70th Street, New York, NY 10021
3 shared publications Jared M. Lippell
Laboratory for Soft Tissue Research, Tissue Engineering, Regeneration and Repair Program, Hospital for Special Surgery, 535 East 70th Street, New York, New York 10021, United States
2 shared publicationsKarla E.-K. Wyatt
Laboratory for Soft Tissue Research, Tissue Engineering, Regeneration and Repair Program, Hospital for Special Surgery, 535 East 70th Street, New York, NY 10021, USA
2 shared publicationsAndrew Sawaya
Department of Dermatology & Cutaneous Surgery, Wound Healing and Regenerative Medicine Research Program, University of Miami Miller Medical School, Miami, Florida, United States of America
1 shared publication- Bradley E. Johnson
University of Rochester
1 shared publication
Latest Publications
- 1 August 2020
- Published by Elsevier in Journal of the Mechanical Behavior of Biomedical Materials
- Vol. 108, 103835
Collagen peptide simulated bending after applied axial deformation
- 1 August 2020
- Published by Elsevier in Journal of the Mechanical Behavior of Biomedical Materials
- Vol. 108, 103835
Collagen peptide simulated bending after applied axial deformation
- 1 February 2014
- Published by Elsevier in Matrix Biology
- Vol. 34, 179-184
Glycation cross-linking induced mechanical–enzymatic cleavage of microscale tendon fibers
- 1 February 2014
- Published by Elsevier in Matrix Biology
- Vol. 34, 179-184
Glycation cross-linking induced mechanical–enzymatic cleavage of microscale tendon fibers
- Open Access
- 14 August 2013
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 8 (8) , e69223
Deep Tissue Injury in Development of Pressure Ulcers: A Decrease of Inflammasome Activation and Changes in Human Skin Morphology in Response to Aging and Mechanical Load
Molecular mechanisms leading to pressure ulcer development are scarce in spite of high mortality of patients. Development of pressure ulcers that is initially observed as deep tissue injury is multifactorial. We postulate that biomechanical forces and inflammasome activation, together with ischemia and aging, may play a role in pressure ulcer development. To test this we used a newly-developed bio-mechanical model in which ischemic young and aged human skin was subjected to a constant physiological compressive stress (load) of 300 kPa (determined by pressure plate analyses of a person in a reclining position) for 0.5–4 hours. Collagen orientation was assessed using polarized light, whereas inflammasome proteins were quantified by immunoblotting. Loaded skin showed marked changes in morphology and NLRP3 inflammasome protein expression. Sub-epidermal separations and altered orientation of collagen fibers were observed in aged skin at earlier time points. Aged skin showed significant decreases in the levels of NLRP3 inflammasome proteins. Loading did not alter NLRP3 inflammasome proteins expression in aged skin, whereas it significantly increased their levels in young skin. We conclude that aging contributes to rapid morphological changes and decrease in inflammasome proteins in response to tissue damage, suggesting that a decline in the innate inflammatory response in elderly skin could contribute to pressure ulcer pathogenesis. Observed morphological changes suggest that tissue damage upon loading may not be entirely preventable. Furthermore, newly developed model described here may be very useful in understanding the mechanisms of deep tissue injury that may lead towards development of pressure ulcers.
- 14 August 2013
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 8 (8) , e69223
Open AccessDeep Tissue Injury in Development of Pressure Ulcers: A Decrease of Inflammasome Activation and Changes in Human Skin Morphology in Response to Aging and Mechanical Load
Molecular mechanisms leading to pressure ulcer development are scarce in spite of high mortality of patients. Development of pressure ulcers that is initially observed as deep tissue injury is multifactorial. We postulate that biomechanical forces and inflammasome activation, together with ischemia and aging, may play a role in pressure ulcer development. To test this we used a newly-developed bio-mechanical model in which ischemic young and aged human skin was subjected to a constant physiological compressive stress (load) of 300 kPa (determined by pressure plate analyses of a person in a reclining position) for 0.5–4 hours. Collagen orientation was assessed using polarized light, whereas inflammasome proteins were quantified by immunoblotting. Loaded skin showed marked changes in morphology and NLRP3 inflammasome protein expression. Sub-epidermal separations and altered orientation of collagen fibers were observed in aged skin at earlier time points. Aged skin showed significant decreases in the levels of NLRP3 inflammasome proteins. Loading did not alter NLRP3 inflammasome proteins expression in aged skin, whereas it significantly increased their levels in young skin. We conclude that aging contributes to rapid morphological changes and decrease in inflammasome proteins in response to tissue damage, suggesting that a decline in the innate inflammatory response in elderly skin could contribute to pressure ulcer pathogenesis. Observed morphological changes suggest that tissue damage upon loading may not be entirely preventable. Furthermore, newly developed model described here may be very useful in understanding the mechanisms of deep tissue injury that may lead towards development of pressure ulcers.
- 1 October 2012
- Published by Elsevier in Seminars in Cancer Biology
- Vol. 22 (5-6) , 385-395
A new paradigm for mechanobiological mechanisms in tumor metastasis
- 1 October 2012
- Published by Elsevier in Seminars in Cancer Biology
- Vol. 22 (5-6) , 385-395
A new paradigm for mechanobiological mechanisms in tumor metastasis
- 20 June 2012
- Published by ASME International
- p. 1157-1158
Covalent Cross-Linking Accelerates Collagen Enzyme Mechano-Kinetic Cleavage: Nanomechanics Predicts Microscale Behavior
Fibrillar collagens are an integral structural element of tissues throughout the body and help provide tensile strength. These collagens are highly resistant to degradation other than by a small number of collagenolytic enzymes. Examples of tensile mechanical forces in vivo include expansion and contraction of blood vessels, tension on tendons and ligaments, and compression and swelling of cartilage.
- 20 June 2012
- Published by ASME International
- p. 1157-1158
Covalent Cross-Linking Accelerates Collagen Enzyme Mechano-Kinetic Cleavage: Nanomechanics Predicts Microscale Behavior
Fibrillar collagens are an integral structural element of tissues throughout the body and help provide tensile strength. These collagens are highly resistant to degradation other than by a small number of collagenolytic enzymes. Examples of tensile mechanical forces in vivo include expansion and contraction of blood vessels, tension on tendons and ligaments, and compression and swelling of cartilage.
- 22 June 2011
- Published by ASME International
- p. 403-404
In Silico Molecular Modeling of Collagen Crosslink Loading
Collagens strengthen tissues throughout the body and are generally resistant to degradation, except by a small number of collagenolytic enzymes. As structural proteins, collagens often experience mechanical forces in vivo including expansion and contraction of blood vessels, tension on tendons and ligaments, and compression of cartilage.
- 22 June 2011
- Published by ASME International
- p. 403-404
In Silico Molecular Modeling of Collagen Crosslink Loading
Collagens strengthen tissues throughout the body and are generally resistant to degradation, except by a small number of collagenolytic enzymes. As structural proteins, collagens often experience mechanical forces in vivo including expansion and contraction of blood vessels, tension on tendons and ligaments, and compression of cartilage.
- 1 June 2011
- Published by Elsevier in Matrix Biology
- Vol. 30 (5-6) , 356-360
Molecular simulations predict novel collagen conformations during cross-link loading
- 1 June 2011
- Published by Elsevier in Matrix Biology
- Vol. 30 (5-6) , 356-360
Molecular simulations predict novel collagen conformations during cross-link loading
- 17 June 2009
- Published by ASME International
- p. 995-996
Collagen Molecular Conformation Exhibits Strain-Rate Dependent Response to Axial Deformation in Silico
Fibrillar collagens are a group of structural proteins that self assemble into a complex ordered structure of interconnected molecules to form supramolecular fibril structures. These collagens have three subgroups based on sequence similarity, of which clade A includes the most abundant fibrillar collagens, types I, II, and III. The fibrous hierarchical structures starts with individual collagen molecules that are crosslinked by enzymes to other collagen molecules to form micro fibrils, which aggregate and link to form sub fibrils, then larger fibrils and in some tissues continuing to assemble into larger levels of fascicles and above.
- 17 June 2009
- Published by ASME International
- p. 995-996
Collagen Molecular Conformation Exhibits Strain-Rate Dependent Response to Axial Deformation in Silico
Fibrillar collagens are a group of structural proteins that self assemble into a complex ordered structure of interconnected molecules to form supramolecular fibril structures. These collagens have three subgroups based on sequence similarity, of which clade A includes the most abundant fibrillar collagens, types I, II, and III. The fibrous hierarchical structures starts with individual collagen molecules that are crosslinked by enzymes to other collagen molecules to form micro fibrils, which aggregate and link to form sub fibrils, then larger fibrils and in some tissues continuing to assemble into larger levels of fascicles and above.
- 24 March 2009
- Published by ASME International in Journal of Biomechanical Engineering
- Vol. 131 (5) , 051004
Deformation-Dependent Enzyme Mechanokinetic Cleavage of Type I Collagen
Collagen is a key structural protein in the extracellular matrix of many tissues. It provides biological tissues with tensile mechanical strength and is enzymatically cleaved by a class of matrix metalloproteinases known as collagenases. Collagen enzymatic kinetics has been well characterized in solubilized, gel, and reconstituted forms. However, limited information exists on enzyme degradation of structurally intact collagen fibers and, more importantly, on the effect of mechanical deformation on collagen cleavage. We studied the degradation of native rat tail tendon fibers by collagenase after the fibers were mechanically elongated to strains of . After the fibers were elongated and the stress was allowed to relax, the fiber was immersed in Clostridium histolyticum collagenase and the decrease in stress was monitored as a means of calculating the rate of enzyme cleavage of the fiber. An enzyme mechanokinetic (EMK) relaxation function in was calculated from the linear stress-time response during fiber cleavage, where corresponds to the zero order Michaelis–Menten enzyme-substrate kinetic response. The EMK relaxation function was found to decrease with applied strain at a rate of per percent strain, with complete inhibition of collagen cleavage predicted to occur at a strain of . However, comparison of the EMK response ( versus ) to collagen’s stress-strain response ( versus ) suggested the possibility of three different EMK responses: (1) constant within the toe region , (2) a rapid decrease in the transition of the toe-to-heel region followed by (3) a constant value throughout the heel and linear regions. This observation suggests that the mechanism for the strain-dependent inhibition of enzyme cleavage of the collagen triple helix may be by a conformational change in the triple helix since the decrease in appeared concomitant with stretching of the collagen molecule.- 24 March 2009
- Published by ASME International in Journal of Biomechanical Engineering
- Vol. 131 (5) , 051004
Deformation-Dependent Enzyme Mechanokinetic Cleavage of Type I Collagen
Collagen is a key structural protein in the extracellular matrix of many tissues. It provides biological tissues with tensile mechanical strength and is enzymatically cleaved by a class of matrix metalloproteinases known as collagenases. Collagen enzymatic kinetics has been well characterized in solubilized, gel, and reconstituted forms. However, limited information exists on enzyme degradation of structurally intact collagen fibers and, more importantly, on the effect of mechanical deformation on collagen cleavage. We studied the degradation of native rat tail tendon fibers by collagenase after the fibers were mechanically elongated to strains of . After the fibers were elongated and the stress was allowed to relax, the fiber was immersed in Clostridium histolyticum collagenase and the decrease in stress was monitored as a means of calculating the rate of enzyme cleavage of the fiber. An enzyme mechanokinetic (EMK) relaxation function in was calculated from the linear stress-time response during fiber cleavage, where corresponds to the zero order Michaelis–Menten enzyme-substrate kinetic response. The EMK relaxation function was found to decrease with applied strain at a rate of per percent strain, with complete inhibition of collagen cleavage predicted to occur at a strain of . However, comparison of the EMK response ( versus ) to collagen’s stress-strain response ( versus ) suggested the possibility of three different EMK responses: (1) constant within the toe region , (2) a rapid decrease in the transition of the toe-to-heel region followed by (3) a constant value throughout the heel and linear regions. This observation suggests that the mechanism for the strain-dependent inhibition of enzyme cleavage of the collagen triple helix may be by a conformational change in the triple helix since the decrease in appeared concomitant with stretching of the collagen molecule.- 20 June 2007
- Published by ASME International
- p. 785-786
Deformation-Dependent Enzyme Cleavage of Collagen
Collagen degradation is a mechanism for normal musculoskeletal development and extracellular matrix (ECM) maintenance, and in response to trauma, disease and inflammation. Matrix metalloproteinases (MMP-1, 8, and 13, the collagenases) are the primary enzymes that act to degrade collagen. These MMPs gain access to the collagen triple helix by binding to the enzyme’s attachment domain along the α-chains, followed by separation (unwinding) of the α-chains to expose the 3/4–1/4 cleavage site, and then cleavage of the α-chain by the enzyme’s catalytic domain [3, 5].
- 20 June 2007
- Published by ASME International
- p. 785-786
Deformation-Dependent Enzyme Cleavage of Collagen
Collagen degradation is a mechanism for normal musculoskeletal development and extracellular matrix (ECM) maintenance, and in response to trauma, disease and inflammation. Matrix metalloproteinases (MMP-1, 8, and 13, the collagenases) are the primary enzymes that act to degrade collagen. These MMPs gain access to the collagen triple helix by binding to the enzyme’s attachment domain along the α-chains, followed by separation (unwinding) of the α-chains to expose the 3/4–1/4 cleavage site, and then cleavage of the α-chain by the enzyme’s catalytic domain [3, 5].