Frederick B. Reitz
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Frederick B. Reitz has a total of 38 co-authors. Here are the top co-authors by number of shared publications:
- Gerald H. Pollack
University of Washington
3 shared publications L. Pagliaro
2 shared publicationsA.A. Grinko
Department of Physics, Ural State University, 51 Lenin Street, Yekaterinburg 620083, Russia
1 shared publicationA.V. Tourovskaia
Department of Bioengineering, WD-12, PO Box 357962, University of Washington, Seattle, WA 98195, USA
1 shared publicationAasthaa Bansal
Department of Biostatistics, University of Washington, Seattle, Washington, United States of America
1 shared publicationCraig E Rubens
Global Alliance to Prevent Prematurity & Stillbirth, Seattle, Washington, United States of America
1 shared publication
Latest Publications
- Open Access
- 2 February 2019
- Published by MDPI AG in Methods and Protocols
- Vol. 2 (1) , 14
Air Puff System Fundamentals for Reproducible Eyeblink Conditioning Research
Air puff systems are at once trivially straightforward and dauntingly complex. On the one hand, they are little but a pressure source, valve, and tube connected together. On the other, the air passing through them is a compressible medium, expanding approximately adiabatically while travelling at high velocity through a compliant tube, and exiting as a turbulent jet with velocity peak and profile varying non-linearly in its near-field. This complexity puts precise mathematical prediction of puff properties out of reach of most labs. There are, however, a number of phenomena fundamental to air puff system design that are worth understanding to a first order of approximation, or at least qualitatively. Using a simplified, “electronic–hydraulic analogy” model, this paper discusses these phenomena in just enough depth for the reader to confidently specify parts for an air puff delivery system, to measure its key parameters, and/or to describe a given system unambiguously in publications, thus maximizing reproducibility.
- 2 February 2019
- Published by MDPI AG in Methods and Protocols
- Vol. 2 (1) , 14
Open AccessAir Puff System Fundamentals for Reproducible Eyeblink Conditioning Research
Air puff systems are at once trivially straightforward and dauntingly complex. On the one hand, they are little but a pressure source, valve, and tube connected together. On the other, the air passing through them is a compressible medium, expanding approximately adiabatically while travelling at high velocity through a compliant tube, and exiting as a turbulent jet with velocity peak and profile varying non-linearly in its near-field. This complexity puts precise mathematical prediction of puff properties out of reach of most labs. There are, however, a number of phenomena fundamental to air puff system design that are worth understanding to a first order of approximation, or at least qualitatively. Using a simplified, “electronic–hydraulic analogy” model, this paper discusses these phenomena in just enough depth for the reader to confidently specify parts for an air puff delivery system, to measure its key parameters, and/or to describe a given system unambiguously in publications, thus maximizing reproducibility.
- 1 January 2019
- Published by Elsevier in Psychiatry Research: Neuroimaging
- Vol. 283, 67-76
FMRI correlates of olfactory processing in typically-developing school-aged children
- 1 January 2019
- Published by Elsevier in Psychiatry Research: Neuroimaging
- Vol. 283, 67-76
FMRI correlates of olfactory processing in typically-developing school-aged children
- Open Access
A Low-Cost, Computer-Interfaced Drawing Pad for fMRI Studies of Dysgraphia and Dyslexia
We have developed a pen and writing tablet for use by subjects during fMRI scanning. The pen consists of two jacketed, multi-mode optical fibers routed to the tip of a hollowed-out ball-point pen. The pen has been further modified by addition of a plastic plate to maintain a perpendicular pen-tablet orientation. The tablet is simply a non-metallic frame holding a paper print of continuously varying color gradients. The optical fibers are routed out of the MRI bore to a light-tight box in an adjacent control room. Within the box, light from a high intensity LED is coupled into one of the fibers, while the other fiber abuts a color sensor. Light from the LED exits the pen tip, illuminating a small spot on the tablet, and the resulting reflected light is routed to the color sensor. Given a lookup table of position for each color on the tablet, the coordinates of the pen on the tablet may be displayed and digitized in real-time. While simple and inexpensive, the system achieves sufficient resolution to grade writing tasks testing dysgraphic and dyslexic phenomena.
Open AccessA Low-Cost, Computer-Interfaced Drawing Pad for fMRI Studies of Dysgraphia and Dyslexia
We have developed a pen and writing tablet for use by subjects during fMRI scanning. The pen consists of two jacketed, multi-mode optical fibers routed to the tip of a hollowed-out ball-point pen. The pen has been further modified by addition of a plastic plate to maintain a perpendicular pen-tablet orientation. The tablet is simply a non-metallic frame holding a paper print of continuously varying color gradients. The optical fibers are routed out of the MRI bore to a light-tight box in an adjacent control room. Within the box, light from a high intensity LED is coupled into one of the fibers, while the other fiber abuts a color sensor. Light from the LED exits the pen tip, illuminating a small spot on the tablet, and the resulting reflected light is routed to the color sensor. Given a lookup table of position for each color on the tablet, the coordinates of the pen on the tablet may be displayed and digitized in real-time. While simple and inexpensive, the system achieves sufficient resolution to grade writing tasks testing dysgraphic and dyslexic phenomena.
- 17 February 2012
- Published by Springer Nature in Theory in Biosciences
- Vol. 131 (1) , 43-47
A “lookup table” schema for synthetic biological patterning
A schema is proposed by which the three-dimensional structure and temporal development of a biological organism might be encoded and implemented via a genetic “lookup table”. In the schema, diffusive morphogen gradients and/or the global concentration of a quickly diffusing signal index sets of kinase genes having promoters with logarithmically diminished affinity for the signal. Specificity of indexing is enhanced via concomitant expression of phosphatases undoing phosphorylation by “neighboring” kinases of greater affinity. Combinations of thus-selected kinases in turn jointly activate, via multiple phosphorylation, a particular enzyme from a virtual, multi-dimensional array thereof, at locations and times specified within the “lookup table”. In principle, such a scheme could be employed to specify arbitrary gross anatomy, surface pigmentation, and/or developmental sequencing, extending the burgeoning toolset of the nascent field of synthetic morphology. A model of two-dimensional surface coloration using this scheme is specified, and LabVIEW software for its exploration is described and made available.
- 17 February 2012
- Published by Springer Nature in Theory in Biosciences
- Vol. 131 (1) , 43-47
A “lookup table” schema for synthetic biological patterning
A schema is proposed by which the three-dimensional structure and temporal development of a biological organism might be encoded and implemented via a genetic “lookup table”. In the schema, diffusive morphogen gradients and/or the global concentration of a quickly diffusing signal index sets of kinase genes having promoters with logarithmically diminished affinity for the signal. Specificity of indexing is enhanced via concomitant expression of phosphatases undoing phosphorylation by “neighboring” kinases of greater affinity. Combinations of thus-selected kinases in turn jointly activate, via multiple phosphorylation, a particular enzyme from a virtual, multi-dimensional array thereof, at locations and times specified within the “lookup table”. In principle, such a scheme could be employed to specify arbitrary gross anatomy, surface pigmentation, and/or developmental sequencing, extending the burgeoning toolset of the nascent field of synthetic morphology. A model of two-dimensional surface coloration using this scheme is specified, and LabVIEW software for its exploration is described and made available.
- Open Access
- 21 December 2011
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 6 (12) , e28972
Choriodecidual Group B Streptococcal Inoculation Induces Fetal Lung Injury without Intra-Amniotic Infection and Preterm Labor in Macaca nemestrina
Early events leading to intrauterine infection and fetal lung injury remain poorly defined, but may hold the key to preventing neonatal and adult chronic lung disease. Our objective was to establish a nonhuman primate model of an early stage of chorioamnionitis in order to determine the time course and mechanisms of fetal lung injury in utero. Ten chronically catheterized pregnant monkeys (Macaca nemestrina) at 118–125 days gestation (term = 172 days) received one of two treatments: 1) choriodecidual and intra-amniotic saline (n = 5), or 2) choriodecidual inoculation of Group B Streptococcus (GBS) 1×106 colony forming units (n = 5). Cesarean section was performed regardless of labor 4 days after GBS or 7 days after saline infusion to collect fetal and placental tissues. Only two GBS animals developed early labor with no cervical change in the remaining animals. Despite uterine quiescence in most cases, blinded review found histopathological evidence of fetal lung injury in four GBS animals characterized by intra-alveolar neutrophils and interstitial thickening, which was absent in controls. Significant elevations of cytokines in amniotic fluid (TNF-α, IL-8, IL-1β, IL-6) and fetal plasma (IL-8) were detected in GBS animals and correlated with lung injury (p<0.05). Lung injury was not directly caused by GBS, because GBS was undetectable in amniotic fluid (∼10 samples tested/animal), maternal and fetal blood by culture and polymerase chain reaction. In only two cases was GBS cultured from the inoculation site in low numbers. Chorioamnionitis occurred in two GBS animals with lung injury, but two others with lung injury had normal placental histology. A transient choriodecidual infection can induce cytokine production, which is associated with fetal lung injury without overt infection of amniotic fluid, chorioamnionitis or preterm labor. Fetal lung injury may, thus, occur silently without symptoms and before the onset of the fetal systemic inflammatory response syndrome.
- 21 December 2011
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 6 (12) , e28972
Open AccessChoriodecidual Group B Streptococcal Inoculation Induces Fetal Lung Injury without Intra-Amniotic Infection and Preterm Labor in Macaca nemestrina
Early events leading to intrauterine infection and fetal lung injury remain poorly defined, but may hold the key to preventing neonatal and adult chronic lung disease. Our objective was to establish a nonhuman primate model of an early stage of chorioamnionitis in order to determine the time course and mechanisms of fetal lung injury in utero. Ten chronically catheterized pregnant monkeys (Macaca nemestrina) at 118–125 days gestation (term = 172 days) received one of two treatments: 1) choriodecidual and intra-amniotic saline (n = 5), or 2) choriodecidual inoculation of Group B Streptococcus (GBS) 1×106 colony forming units (n = 5). Cesarean section was performed regardless of labor 4 days after GBS or 7 days after saline infusion to collect fetal and placental tissues. Only two GBS animals developed early labor with no cervical change in the remaining animals. Despite uterine quiescence in most cases, blinded review found histopathological evidence of fetal lung injury in four GBS animals characterized by intra-alveolar neutrophils and interstitial thickening, which was absent in controls. Significant elevations of cytokines in amniotic fluid (TNF-α, IL-8, IL-1β, IL-6) and fetal plasma (IL-8) were detected in GBS animals and correlated with lung injury (p<0.05). Lung injury was not directly caused by GBS, because GBS was undetectable in amniotic fluid (∼10 samples tested/animal), maternal and fetal blood by culture and polymerase chain reaction. In only two cases was GBS cultured from the inoculation site in low numbers. Chorioamnionitis occurred in two GBS animals with lung injury, but two others with lung injury had normal placental histology. A transient choriodecidual infection can induce cytokine production, which is associated with fetal lung injury without overt infection of amniotic fluid, chorioamnionitis or preterm labor. Fetal lung injury may, thus, occur silently without symptoms and before the onset of the fetal systemic inflammatory response syndrome.
- 16 May 2003
- Published by Wiley in Journal of Applied Polymer Science
- Vol. 89 (5) , 1319-1321
Potentials in anionic polyelectrolyte hydrogels
Polyelectrolyte hydrogels perform interesting physical and chemical changes, such as motility and bend in the presence of electric fields and interaction with ionic surfactants. We think that ionizable groups of polyelectrolyte hydrogels play a vital role in these environments. In this work, we prepared three anionic polyelectrolyte hydrogels by two different routes, and micropipetts electrode was employed to determined negative potential in the gels. Our work showed that the gels reported herein all display a high degree of swelling with hydration and have a substantial negative potential in KCl solution and a simple mechanism was also described. © 2003 Wiley Periodicals, Inc. J Appl Polym Sci 89: 1319–1321, 2003
- 16 May 2003
- Published by Wiley in Journal of Applied Polymer Science
- Vol. 89 (5) , 1319-1321
Potentials in anionic polyelectrolyte hydrogels
Polyelectrolyte hydrogels perform interesting physical and chemical changes, such as motility and bend in the presence of electric fields and interaction with ionic surfactants. We think that ionizable groups of polyelectrolyte hydrogels play a vital role in these environments. In this work, we prepared three anionic polyelectrolyte hydrogels by two different routes, and micropipetts electrode was employed to determined negative potential in the gels. Our work showed that the gels reported herein all display a high degree of swelling with hydration and have a substantial negative potential in KCl solution and a simple mechanism was also described. © 2003 Wiley Periodicals, Inc. J Appl Polym Sci 89: 1319–1321, 2003
- 8 February 2003
- Published by Elsevier in Computer Methods and Programs in Biomedicine
- Vol. 72 (1) , 21-26
“Minimum average risk” as a new peak-detection algorithm applied to myofibrillar dynamics
- 8 February 2003
- Published by Elsevier in Computer Methods and Programs in Biomedicine
- Vol. 72 (1) , 21-26
“Minimum average risk” as a new peak-detection algorithm applied to myofibrillar dynamics
- 2 December 2002
- Published by Elsevier in Computer Methods and Programs in Biomedicine
- Vol. 70 (1) , 61-69
Labview virtual instruments for calcium buffer calculations
- 2 December 2002
- Published by Elsevier in Computer Methods and Programs in Biomedicine
- Vol. 70 (1) , 61-69
Labview virtual instruments for calcium buffer calculations
- 1 April 2002
- Published by Elsevier in Ultramicroscopy
- Vol. 90 (4) , 259-264
Fluorescence anisotropy near-field scanning optical microscopy (FANSOM): a new technique for nanoscale microviscometry
- 1 April 2002
- Published by Elsevier in Ultramicroscopy
- Vol. 90 (4) , 259-264
Fluorescence anisotropy near-field scanning optical microscopy (FANSOM): a new technique for nanoscale microviscometry
- 1 July 2001
- Vol. 47 (5) , 885-900
Phase transitions and molecular motion in the cell.
The cytoplasm exhibits all of the signature characteristics of a gel. The thesis put forth here is that the cytoplasm's gel-like character is central to the generation of biological movement. In artificial gels, a common vehicle for generating movement is the polymer-gel phase-transition. By undergoing phase-transition, gels produce motion of both solvent and solutes. It is argued that cells do the same. Three examples are given: the secretory system, the muscle contraction system and the biological streaming system. In each case it is shown that the characteristic motions may be created as proteins and water undergo transition from an expanded, hydrated state to a contracted, dehydrated state--or the reverse. These changes shift solutes and solvent in a characteristic way that depends on the respective organelle's structure. Phase-transitions are simple, powerful mechanisms that may be responsible for many, if not all, biological motions.
- 1 July 2001
- Vol. 47 (5) , 885-900
Phase transitions and molecular motion in the cell.
The cytoplasm exhibits all of the signature characteristics of a gel. The thesis put forth here is that the cytoplasm's gel-like character is central to the generation of biological movement. In artificial gels, a common vehicle for generating movement is the polymer-gel phase-transition. By undergoing phase-transition, gels produce motion of both solvent and solutes. It is argued that cells do the same. Three examples are given: the secretory system, the muscle contraction system and the biological streaming system. In each case it is shown that the characteristic motions may be created as proteins and water undergo transition from an expanded, hydrated state to a contracted, dehydrated state--or the reverse. These changes shift solutes and solvent in a characteristic way that depends on the respective organelle's structure. Phase-transitions are simple, powerful mechanisms that may be responsible for many, if not all, biological motions.