Jose Maria Martinez Montiel

Colonoscopy is considered the gold standard for detecting and diagnosing colorectal cancer (CRC), which is the second most common cause of cancer-related deaths worldwide. While colonoscopy is generally safe and effective at reducing CRC mortality, lesions can be missed during procedures, with adverse impacts on the patient. Latest innovations in hardware and software led to the development of adjunct tools for complementing standard colonoscopy to ensure optimal outcomes. Such tools aim to enhance the detection of lesions, standardize procedures, enhance safety, and minimize discomfort. Ultimately, they contribute to reducing the morbidity and mortality rates associated with CRC. This survey comprehensively explores both clinically tested and emerging advanced hardware and software adjunct tools, categorizing them based on their role in targeting three clinical challenges: mucosal visualization, lesion detection and classification, and navigation and procedure assessment. Moreover, this analysis allows exploring synergistic strategies for the future of the practice, with a focus on the promising role of AI-embedded robotic technologies.

In this paper we present NR-SLAM, a novel non-rigid monocular SLAM system founded on the combination of a Dynamic Deformation Graph with a Visco-Elastic deformation model. The former enables our system to represent the dynamics of the deforming environment as the camera explores, while the later allows us to model general deformations in a simple way. The presented system is able to automatically initialize and extend a map modeled by a sparse point cloud in deforming environments, that is refined with a sliding-window Deformable Bundle Adjustment. This map serves as base for the estimation of the camera motion and deformation and enables us to represent arbitrary surface topologies, overcoming the limitations of previous methods. To assess the performance of our system in challenging deforming scenarios, we evaluate it in several representative medical datasets. In our experiments, NR-SLAM outperforms previous deformable SLAM systems, achieving millimeter reconstruction accuracy and bringing automated medical intervention closer. For the benefit of the community, we make the source code public.

Deformable Monocular SLAM algorithms recover the localization of a camera in an unknown deformable environment. Current approaches use a template-based deformable tracking to recover the camera pose and the deformation of the map. These template-based methods use an underlying global deformation model. In this paper, we introduce a novel deformable camera tracking method with a local deformation model for each point. Each map point is defined as a single textured surfel that moves independently of the other map points. Thanks to a direct photometric error cost function, we can track the position and orientation of the surfel without an explicit global deformation model. In our experiments, we validate the proposed system and observe that our local deformation model estimates more accurately the targeted deformations of the map in both laboratory-controlled experiments and in-body scenarios undergoing quasi-isometric deformations, with changing topology or discontinuities.

Estimating a scene reconstruction and the camera motion from in-body videos is challenging due to several factors, e.g. the deformation of in-body cavities or the lack of texture. In this paper we present Endo-Depth-and-Motion, a pipeline that estimates the 6-degrees-of-freedom camera pose and dense 3D scene models from monocular endoscopic sequences. Our approach leverages recent advances in self-supervised depth networks to generate pseudo-RGBD frames, then tracks the camera pose using photometric residuals and fuses the registered depth maps in a volumetric representation. We present an extensive experimental evaluation in the public dataset Hamlyn, showing high-quality results and comparisons against relevant baselines. We also release all models and code ¹ for future comparisons.

This article presents ORB-SLAM3, the first system able to perform visual, visual-inertial and multimap SLAM with monocular, stereo and RGB-D cameras, using pin-hole and fisheye lens models. The first main novelty is a tightly integrated visual-inertial SLAM system that fully relies on maximum a posteriori (MAP) estimation, even during IMU initialization, resulting in real-time robust operation in small and large, indoor and outdoor environments, being two to ten times more accurate than previous approaches. The second main novelty is a multiple map system relying on a new place recognition method with improved recall that lets ORB-SLAM3 survive to long periods of poor visual information: when it gets lost, it starts a new map that will be seamlessly merged with previous maps when revisiting them. Compared with visual odometry systems that only use information from the last few seconds, ORB-SLAM3 is the first system able to reuse in all the algorithm stages all previous information from high parallax co-visible keyframes, even if they are widely separated in time or come from previous mapping sessions, boosting accuracy. Our experiments show that, in all sensor configurations, ORB-SLAM3 is as robust as the best systems available in the literature and significantly more accurate. Notably, our stereo-inertial SLAM achieves an average accuracy of 3.5 cm in the EuRoC drone and 9 mm under quick hand-held motions in the room of TUM-VI dataset, representative of AR/VR scenarios. For the benefit of the community we make public the source code.

Monocular simultaneous localization and mapping (SLAM) algorithms perform robustly when observing rigid scenes; however, they fail when the observed scene deforms, for example, in medical endoscopy applications. In this article, we present DefSLAM, the first monocular SLAM capable of operating in deforming scenes in real time. Our approach intertwines Shape-from-Template (SfT) and Non-Rigid Structure-from-Motion (NRSfM) techniques to deal with the exploratory sequences typical of SLAM. A deformation tracking thread recovers the pose of the camera and the deformation of the observed map, at frame rate, by means of SfT processing a template that models the scene shape-at-rest. A deformation mapping thread runs in parallel with the tracking to update the template, at keyframe rate, by means of an isometric NRSfM processing a batch of full perspective keyframes. In our experiments, DefSLAM processes close-up sequences of deforming scenes, both in a laboratory-controlled experiment and in medical endoscopy sequences, producing accurate 3D models of the scene with respect to the moving camera.

Photometric bundle adjustment (PBA) accurately estimates geometry from video. However, current PBA systems have a temporary map that cannot manage scene reobservations. We present, direct sparse mapping, a full monocular visual simultaneous localization and mapping (SLAM) based on PBA. Its persistent map handles reobservations, yielding the most accurate results up to date on EuRoC for a direct method.