Jiamin Wu
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Jiamin Wu has a total of 600 co-authors. Here are the top co-authors by number of shared publications:
- Qionghai Dai
Department of Automation, Tsinghua University, Beijing, China
87 shared publications - Lu Fang
Department of Electronic Engineering, Beijing National Research Center for Information Science and Technology, Tsinghua University, Beijing, China
20 shared publications - Zhi Lu
Department of Psychological and Cognitive Sciences, Tsinghua University, Beijing, China
20 shared publications Zhifeng Zhao
Tsinghua University
14 shared publicationsYuanlong Zhang
Tsinghua University
13 shared publicationsJingtao Fan
Department of Automation, Tsinghua University, Beijing, China
12 shared publications
Latest Publications
- 19 October 2026
- Published by Springer Nature in Nature
- p. 1-3
Cortex-wide imaging in naturally behaving mice with 1-gram wireless mesoscopes
- 19 October 2026
- Published by Springer Nature in Nature
- p. 1-3
Cortex-wide imaging in naturally behaving mice with 1-gram wireless mesoscopes
- 30 September 2026
- Published by Springer Nature in Nature Photonics
- Vol. 20 (10) , 1123-1124
One super sensor from many
- 30 September 2026
- Published by Springer Nature in Nature Photonics
- Vol. 20 (10) , 1123-1124
One super sensor from many
- 10 September 2026
- Published by Springer Nature in Nature Medicine
- Vol. 32 (10) , 3520-3524
Initial lessons from real-world implementation of an AI-agent eye clinic in China
- 10 September 2026
- Published by Springer Nature in Nature Medicine
- Vol. 32 (10) , 3520-3524
Initial lessons from real-world implementation of an AI-agent eye clinic in China
- 9 September 2026
- Published by Springer Nature in Nature Nanotechnology
- Vol. 21 (11) , 1518-1530
How nanophotonics can drive optical computing toward practical applications
The rapid advancement of artificial intelligence (AI) imposes unprecedented speed and energy requirements on large-scale computation. Owing to its intrinsic high bandwidth, massive parallelism capacity and low energy consumption, optical computing is widely regarded as one of the most promising technologies to address AI computation demands. Here we offer a synthesis of photonic platforms that have already shown programmability, high integration density and stability, and that can support large-scale AI models, edge computing, and logic and scientific computing. We summarize the requirements that optical computing imposes on nanomaterials properties, architecture design, nanofabrication and large-scale integration. Finally, we analyse commercial systems and provide a perspective on how nanotechnology-informed solutions can improve performance in terms of computing speed, scalability and complexity in optical computing.
- 9 September 2026
- Published by Springer Nature in Nature Nanotechnology
- Vol. 21 (11) , 1518-1530
How nanophotonics can drive optical computing toward practical applications
The rapid advancement of artificial intelligence (AI) imposes unprecedented speed and energy requirements on large-scale computation. Owing to its intrinsic high bandwidth, massive parallelism capacity and low energy consumption, optical computing is widely regarded as one of the most promising technologies to address AI computation demands. Here we offer a synthesis of photonic platforms that have already shown programmability, high integration density and stability, and that can support large-scale AI models, edge computing, and logic and scientific computing. We summarize the requirements that optical computing imposes on nanomaterials properties, architecture design, nanofabrication and large-scale integration. Finally, we analyse commercial systems and provide a perspective on how nanotechnology-informed solutions can improve performance in terms of computing speed, scalability and complexity in optical computing.
- Open Access
- 8 September 2026
- Published by Springer Nature in Research Square
4D self-supervised learning of cross-dimensional representation enables high-performance denoising of volumetric fluorescence imaging
Volumetric time-lapse fluorescence microscopy enables panoramic visualization of biological structures and dynamics in living organisms. However, noise fundamentally limits the fidelity and quantitative analysis of fluorescence recordings. Current self-supervised denoising methods do not fully model the four-dimensional (4D) correlations of volumetric time-lapse data, thereby constraining restoration quality. Here we present SDT-4D, the first 4D self-supervised denoising framework to jointly incorporate lateral, axial, and temporal dependencies without requiring any clean images for training. We designed a unified 4D transformer architecture to capture long-range dependencies across 4D hypervoxels. This design enables SDT-4D to restore biological signals while preserving volumetric continuity and temporal dynamics. To improve reliability, we further developed a physics-informed uncertainty quantification (PhUQ) method and embedded it into SDT-4D, deriving pixel-wise confidence maps of restored images. In volumetric calcium imaging, SDT-4D achieves state-of-the-art denoising performance and reveals neuronal anatomy and calcium transients. In cellular morphodynamic imaging, SDT-4D restores cellular structures obscured by noise and facilitates downstream analysis of immune cell migration and glial morphology evolution. Together, these results demonstrate the effectiveness and reliability of SDT-4D for restoring and interpreting photon-limited biological dynamics.
- 8 September 2026
- Published by Springer Nature in Research Square
Open Access4D self-supervised learning of cross-dimensional representation enables high-performance denoising of volumetric fluorescence imaging
Volumetric time-lapse fluorescence microscopy enables panoramic visualization of biological structures and dynamics in living organisms. However, noise fundamentally limits the fidelity and quantitative analysis of fluorescence recordings. Current self-supervised denoising methods do not fully model the four-dimensional (4D) correlations of volumetric time-lapse data, thereby constraining restoration quality. Here we present SDT-4D, the first 4D self-supervised denoising framework to jointly incorporate lateral, axial, and temporal dependencies without requiring any clean images for training. We designed a unified 4D transformer architecture to capture long-range dependencies across 4D hypervoxels. This design enables SDT-4D to restore biological signals while preserving volumetric continuity and temporal dynamics. To improve reliability, we further developed a physics-informed uncertainty quantification (PhUQ) method and embedded it into SDT-4D, deriving pixel-wise confidence maps of restored images. In volumetric calcium imaging, SDT-4D achieves state-of-the-art denoising performance and reveals neuronal anatomy and calcium transients. In cellular morphodynamic imaging, SDT-4D restores cellular structures obscured by noise and facilitates downstream analysis of immune cell migration and glial morphology evolution. Together, these results demonstrate the effectiveness and reliability of SDT-4D for restoring and interpreting photon-limited biological dynamics.
- 7 September 2026
- Published by Springer Nature in Nature Methods
- p. 1-13
Rapid robust high-fidelity 3D neuronal extraction from multiview calcium imaging datasets
Recent developments in imaging facilitate large-scale three-dimensional (3D) neuronal recording. While the resulting large datasets shed light on population-level neural coding, extracting neuronal calcium dynamics from 3D volumes remains more challenging than from two-dimensional images due to noise and scattering. Here we present DeepWonder3D, a general end-to-end pipeline for rapid and robust 3D neuronal extraction with high fidelity. Instead of processing voxel by voxel, DeepWonder3D works on the multiview projections of 3D imaging data obtained either digitally or optically through specific point spread functions and is therefore applicable to diverse techniques, including point-scanning microscopy, light-field microscopy and two-photon synthetic aperture microscopy. Integrating denoising, resolution registration, background removal, neuronal extraction and multiview fusion into a unified pipeline tailored for large-scale high-resolution datasets contaminated by noise and scattering, DeepWonder3D outperforms state-of-the-art methods in 3D localization accuracy with a tenfold reduction in computational costs, validated by numerical simulations and a hybrid two-photon/light-field imaging system. With the RUSH3D mesoscope, DeepWonder3D achieves high-fidelity 3D calcium extraction of tens of thousands of neurons across the mouse cortex within hours.
- 7 September 2026
- Published by Springer Nature in Nature Methods
- p. 1-13
Rapid robust high-fidelity 3D neuronal extraction from multiview calcium imaging datasets
Recent developments in imaging facilitate large-scale three-dimensional (3D) neuronal recording. While the resulting large datasets shed light on population-level neural coding, extracting neuronal calcium dynamics from 3D volumes remains more challenging than from two-dimensional images due to noise and scattering. Here we present DeepWonder3D, a general end-to-end pipeline for rapid and robust 3D neuronal extraction with high fidelity. Instead of processing voxel by voxel, DeepWonder3D works on the multiview projections of 3D imaging data obtained either digitally or optically through specific point spread functions and is therefore applicable to diverse techniques, including point-scanning microscopy, light-field microscopy and two-photon synthetic aperture microscopy. Integrating denoising, resolution registration, background removal, neuronal extraction and multiview fusion into a unified pipeline tailored for large-scale high-resolution datasets contaminated by noise and scattering, DeepWonder3D outperforms state-of-the-art methods in 3D localization accuracy with a tenfold reduction in computational costs, validated by numerical simulations and a hybrid two-photon/light-field imaging system. With the RUSH3D mesoscope, DeepWonder3D achieves high-fidelity 3D calcium extraction of tens of thousands of neurons across the mouse cortex within hours.
- 27 August 2026
- Published by Massachusetts Medical Society in NEJM AI
- Vol. 3 (9)
A Classification of Safety Risks in Medical AI
- 27 August 2026
- Published by Massachusetts Medical Society in NEJM AI
- Vol. 3 (9)
A Classification of Safety Risks in Medical AI
- 3 August 2026
- Published by Springer Nature in Nature Photonics
- Vol. 20 (9) , 993-1005
Methods, trade-offs and opportunities in high-speed optical microscopy for neural voltage imaging
- 3 August 2026
- Published by Springer Nature in Nature Photonics
- Vol. 20 (9) , 993-1005
Methods, trade-offs and opportunities in high-speed optical microscopy for neural voltage imaging
- Open Access
- 15 July 2026
- Published by Springer Nature in Nature Biotechnology
High numerical aperture confocal volumetric mesoscope reveals mesoscale subcellular dynamics in vivo
Simultaneously capturing subcellular dynamics across thousands of cells in mammals remains challenging because of trade-offs among spatial resolution, field of view, imaging speed and sample viability, particularly under high-NA (numerical aperture) conditions. Here we design a high-NA mesoscale objective lens and present a confocal volumetric mesoscope with an NA of 1.05, RUSH3D-HR, achieving ~390-nm resolution across a volume of 2.7 × 2.0 × 0.04 mm 3 at five volumes per second with low phototoxicity. By integrating our previously developed confocal scanning light-field framework with a parallelized deep-learning pipeline, RUSH3D-HR increases experimental efficiency by orders of magnitude. Long-term imaging at 70 billion voxels per second visualizes immune responses such as long-distance collective cell migrations during wound healing and large-scale migrasome generation and neutrophil–macrophage interactions during acute liver failure. Hour-long monitoring over 6,000 neutrophils reveals transient emergent swarming behaviors in mouse spleen during lipopolysaccharide-induced inflammation, which is suppressed with electroacupuncture at ST36, providing direct evidence for the immunomodulatory mechanism of peripheral electrical stimulation.
- 15 July 2026
- Published by Springer Nature in Nature Biotechnology
Open AccessHigh numerical aperture confocal volumetric mesoscope reveals mesoscale subcellular dynamics in vivo
Simultaneously capturing subcellular dynamics across thousands of cells in mammals remains challenging because of trade-offs among spatial resolution, field of view, imaging speed and sample viability, particularly under high-NA (numerical aperture) conditions. Here we design a high-NA mesoscale objective lens and present a confocal volumetric mesoscope with an NA of 1.05, RUSH3D-HR, achieving ~390-nm resolution across a volume of 2.7 × 2.0 × 0.04 mm 3 at five volumes per second with low phototoxicity. By integrating our previously developed confocal scanning light-field framework with a parallelized deep-learning pipeline, RUSH3D-HR increases experimental efficiency by orders of magnitude. Long-term imaging at 70 billion voxels per second visualizes immune responses such as long-distance collective cell migrations during wound healing and large-scale migrasome generation and neutrophil–macrophage interactions during acute liver failure. Hour-long monitoring over 6,000 neutrophils reveals transient emergent swarming behaviors in mouse spleen during lipopolysaccharide-induced inflammation, which is suppressed with electroacupuncture at ST36, providing direct evidence for the immunomodulatory mechanism of peripheral electrical stimulation.
- 15 July 2026
- Published by Springer Nature in Nature Biotechnology
High-fidelity fast fluorescence lifetime imaging by event-based denoising
Fluorescence lifetime imaging microscopy (FLIM) enables quantitative measurement of molecular environments, interactions and protein conformations. However, a large number of photons are required for accurate lifetime determination, restricting its practical applications in fast deep-tissue imaging. Here, we present event-based first-photon FLIM (EFLIM), a self-supervised denoising method that infers fluorescence lifetime at extremely low light. By representing each excitation event as a binary process instead of histogram accumulation, EFLIM reduces photon requirement by over two orders of magnitude compared to state-of-the-art algorithms, leading to an apparent mean lifetime measurement below one photon per pixel with strong robustness to intensity artifacts. To demonstrate EFLIM's applicability, we observed transient intracellular dynamics of ligand-dependent molecular states, captured putative vesicle-mediated contacts between different lymphocytes through multiplexed imaging in a single spectral channel and achieved rapid label-free visualization of tumor heterogeneity in human glioma tissue. These results illustrate EFLIM's strong potential in neuroscience, cell biology, immunology and pathology by probing dynamic molecular processes in vivo.
- 15 July 2026
- Published by Springer Nature in Nature Biotechnology
High-fidelity fast fluorescence lifetime imaging by event-based denoising
Fluorescence lifetime imaging microscopy (FLIM) enables quantitative measurement of molecular environments, interactions and protein conformations. However, a large number of photons are required for accurate lifetime determination, restricting its practical applications in fast deep-tissue imaging. Here, we present event-based first-photon FLIM (EFLIM), a self-supervised denoising method that infers fluorescence lifetime at extremely low light. By representing each excitation event as a binary process instead of histogram accumulation, EFLIM reduces photon requirement by over two orders of magnitude compared to state-of-the-art algorithms, leading to an apparent mean lifetime measurement below one photon per pixel with strong robustness to intensity artifacts. To demonstrate EFLIM's applicability, we observed transient intracellular dynamics of ligand-dependent molecular states, captured putative vesicle-mediated contacts between different lymphocytes through multiplexed imaging in a single spectral channel and achieved rapid label-free visualization of tumor heterogeneity in human glioma tissue. These results illustrate EFLIM's strong potential in neuroscience, cell biology, immunology and pathology by probing dynamic molecular processes in vivo.