Judy Shamoun-Baranes
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Research Interests
Judy Shamoun-Baranes has a total of 674 co-authors. Here are the top co-authors by number of shared publications:
Willem Bouten
Dept of Theoretical and Computational Ecology, Inst. for Biodiversity and Ecosystem Dynamics, Univ. of Amsterdam Amsterdam the Netherlands
24 shared publications- E. Emiel van Loon
Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
18 shared publications - Silke Bauer
Dynamic Macroecology, Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
12 shared publications - Willem Bouten
Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
12 shared publications - Hidde Leijnse
Royal Netherlands Meteorological Institute, De Bilt, The Netherlands
11 shared publications - Kees C. J. Camphuysen
Department of Coastal Systems, Royal Netherlands Institute for Sea Research (NIOZ) 2 , P.O. Box 59, 1790 AB, Den Burg, Texel
11 shared publications
Latest Publications
- Open Access
- 5 October 2026
- Published by Wiley in Ecological Solutions and Evidence
- Vol. 7 (4) , e70315
Evaluating the sensitivity of raptors to wind turbine collisions: An integrative approach based on GPS tracking
Wind energy development leads to an increased mortality of birds due to collisions with wind turbines, especially in raptors. To assess the sensitivity of different bird species to wind turbine collisions, predict collision risk and identify effective mitigation measures, detailed information on flight behaviour is essential, but thus far unavailable for many species. Here, we evaluated the sensitivity of breeding birds of six raptor species—Montagu's Harrier (MoH), Hen Harrier, Marsh Harrier, Common Buzzard (CB), Red Kite (RK) and Short‐toed Eagle (STE)—to wind turbine collisions by integrating three aspects of flight behaviour, that is time spent in flight, proportion of flights at risk height and distance travelled from the nest location. We used GPS‐tracking data collected in 15 study areas in 6 European countries, comprising 280 individuals, 74,501 individual tracking days and 5786 h of high‐frequency flight tracks, providing accurate flight height data. The average time spent in flight ranged from 0.5 (CB) to 3.4 h day −1 (MoH) in females and from 1.0 (CB) to 7.4 h day −1 (MoH) in males. The proportion of flights at risk height (32–200 m above ground level) varied between 12.4% (MoH) and 56.4% (RK). The highest sensitivity index (time spent at risk height per year) was found in RK (1.7–7.4 times higher than in the other species). The mean 90% quantile of distance from nest ranged from 0.7 (CB) to 9.8 km (STE) in females, and from 1.0 (CB) to 5.6 km (MoH) in males. With increasing distance from nest, sensitivity (time spent at risk height per km 2 ) decreased with species‐specific slopes. Practical implication: These results indicate that flight behaviour explains substantial differences in the sensitivity to wind turbine collisions among raptor species. Our integrative approach to assess sensitivity based on flight behaviour regardless of current exposure allows to prioritise species for the selection of wind farm sites and conservation measures, and can be complemented with other aspects, for example extinction risk. Our findings on spatial sensitivity with respect to nest‐turbine distances may inform the siting of wind turbines to minimise collision risk.
- 5 October 2026
- Published by Wiley in Ecological Solutions and Evidence
- Vol. 7 (4) , e70315
Open AccessEvaluating the sensitivity of raptors to wind turbine collisions: An integrative approach based on GPS tracking
Wind energy development leads to an increased mortality of birds due to collisions with wind turbines, especially in raptors. To assess the sensitivity of different bird species to wind turbine collisions, predict collision risk and identify effective mitigation measures, detailed information on flight behaviour is essential, but thus far unavailable for many species. Here, we evaluated the sensitivity of breeding birds of six raptor species—Montagu's Harrier (MoH), Hen Harrier, Marsh Harrier, Common Buzzard (CB), Red Kite (RK) and Short‐toed Eagle (STE)—to wind turbine collisions by integrating three aspects of flight behaviour, that is time spent in flight, proportion of flights at risk height and distance travelled from the nest location. We used GPS‐tracking data collected in 15 study areas in 6 European countries, comprising 280 individuals, 74,501 individual tracking days and 5786 h of high‐frequency flight tracks, providing accurate flight height data. The average time spent in flight ranged from 0.5 (CB) to 3.4 h day −1 (MoH) in females and from 1.0 (CB) to 7.4 h day −1 (MoH) in males. The proportion of flights at risk height (32–200 m above ground level) varied between 12.4% (MoH) and 56.4% (RK). The highest sensitivity index (time spent at risk height per year) was found in RK (1.7–7.4 times higher than in the other species). The mean 90% quantile of distance from nest ranged from 0.7 (CB) to 9.8 km (STE) in females, and from 1.0 (CB) to 5.6 km (MoH) in males. With increasing distance from nest, sensitivity (time spent at risk height per km 2 ) decreased with species‐specific slopes. Practical implication: These results indicate that flight behaviour explains substantial differences in the sensitivity to wind turbine collisions among raptor species. Our integrative approach to assess sensitivity based on flight behaviour regardless of current exposure allows to prioritise species for the selection of wind farm sites and conservation measures, and can be complemented with other aspects, for example extinction risk. Our findings on spatial sensitivity with respect to nest‐turbine distances may inform the siting of wind turbines to minimise collision risk.
- Open Access
- 16 September 2026
- Published by Wiley in Conservation Letters
- Vol. 19 (5) , e70075
Highly Mobile Seabirds Reveal Areas of Conservation Importance Across the Atlantic Ocean
Countries have committed to expanding the marine protected area (MPA) network to 30% of the world's ocean by 2030, more than tripling current coverage, and focusing on areas important for biodiversity. For such expansion to translate into effective conservation of marine biodiversity, it must rely on the best available knowledge. Here, we analyze tracking data on > 13,000 individuals (44 species, eight families) to map the distribution of highly mobile seabirds in the Atlantic Ocean and adjacent seas throughout the year. We identify regions important year‐round or seasonally. The High Seas are as important as national waters for highly mobile seabirds but are even less protected. Current Atlantic MPAs hold < 14% of tracked species density, but their expansion to 30% of the ocean could protect up to two thirds. We share this new knowledge layer to support national and international efforts and policies to strategically expand the Atlantic MPA network.
- 16 September 2026
- Published by Wiley in Conservation Letters
- Vol. 19 (5) , e70075
Open AccessHighly Mobile Seabirds Reveal Areas of Conservation Importance Across the Atlantic Ocean
Countries have committed to expanding the marine protected area (MPA) network to 30% of the world's ocean by 2030, more than tripling current coverage, and focusing on areas important for biodiversity. For such expansion to translate into effective conservation of marine biodiversity, it must rely on the best available knowledge. Here, we analyze tracking data on > 13,000 individuals (44 species, eight families) to map the distribution of highly mobile seabirds in the Atlantic Ocean and adjacent seas throughout the year. We identify regions important year‐round or seasonally. The High Seas are as important as national waters for highly mobile seabirds but are even less protected. Current Atlantic MPAs hold < 14% of tracked species density, but their expansion to 30% of the ocean could protect up to two thirds. We share this new knowledge layer to support national and international efforts and policies to strategically expand the Atlantic MPA network.
- Open Access
- 2 June 2026
- Published by Springer Nature in Nature Sustainability
- Vol. 9 (8) , 1-8
Bird migration and wind-energy production across Western Europe
With global ambitions to decarbonize the energy system, wind power capacity will continue to increase dramatically worldwide. This raises concerns about environmental impacts of wind energy infrastructure and operations, particularly for collision of aerial wildlife. Using a network of weather surveillance radars, we quantified numbers, timing and spatial extent of nightly and annual large-scale bird movements over Western Europe. We also mapped onshore wind turbines and calculated potential energy production using wind speed and distribution data. Integrating bird movement patterns, turbine characteristics and energy production, we estimated the number of birds that are potentially at risk of collision because they fly in proximity to wind turbines and at heights of rotating blades. To demonstrate potential for designing measures to mitigate risk to aerial biodiversity, we derive curtailment scenarios and compare costs and benefits for energy production and conserving biodiversity and show that surprisingly efficient trade-offs may be possible. Our findings contribute to broader efforts for minimizing impacts from wind energy production on migratory bird populations while endeavouring to ensure adequate energy supply.
- 2 June 2026
- Published by Springer Nature in Nature Sustainability
- Vol. 9 (8) , 1-8
Open AccessBird migration and wind-energy production across Western Europe
With global ambitions to decarbonize the energy system, wind power capacity will continue to increase dramatically worldwide. This raises concerns about environmental impacts of wind energy infrastructure and operations, particularly for collision of aerial wildlife. Using a network of weather surveillance radars, we quantified numbers, timing and spatial extent of nightly and annual large-scale bird movements over Western Europe. We also mapped onshore wind turbines and calculated potential energy production using wind speed and distribution data. Integrating bird movement patterns, turbine characteristics and energy production, we estimated the number of birds that are potentially at risk of collision because they fly in proximity to wind turbines and at heights of rotating blades. To demonstrate potential for designing measures to mitigate risk to aerial biodiversity, we derive curtailment scenarios and compare costs and benefits for energy production and conserving biodiversity and show that surprisingly efficient trade-offs may be possible. Our findings contribute to broader efforts for minimizing impacts from wind energy production on migratory bird populations while endeavouring to ensure adequate energy supply.
- Open Access
- 9 May 2026
- Published by Elsevier in Environmental Pollution
- Vol. 401, 128258
Plastic biovectoring by two closely-related gull species to coastal marshes
- 9 May 2026
- Published by Elsevier in Environmental Pollution
- Vol. 401, 128258
Open AccessPlastic biovectoring by two closely-related gull species to coastal marshes
- Open Access
Low breeding propensity in a declining Arctic‐breeding swan revealed by telemetry data
Many migratory bird populations are declining in the face of habitat degradation and climate change, making it important to identify which stages of their annual cycle are most affected in order to guide conservation measures. The Bewick's Swan Cygnus columbianus bewickii , an Arctic‐breeding waterfowl species, has suffered a dramatic population decline (from approximately 30 000 individuals in 1995 to around 13 000 in 2020) due to low reproductive output. However, it is unknown which component of reproduction (breeding propensity, nesting success and post‐hatching survival) is the underlying cause. We analysed GPS tracking and accelerometer data from over 60 adult female Bewick's Swans collected over 8 years, to derive breeding propensity (i.e. the decision to breed or not) and nesting success (i.e. completing incubation) at the individual level, and assess how these metrics are influenced by onset of spring and migration timing. The odds of breeding increased by 3.9% (estimate = −0.04, se = 0.02, P = 0.04) for each day that the swans arrived earlier at the breeding grounds. The odds of successfully nesting increased by 5.8% (estimate = −0.06, se = 0.03, P = 0.06) per day of earlier snowmelt anomaly, suggesting a slight positive effect of climate warming on nesting. However, the proportion of breeding females was consistently low throughout the study period, suggesting that other factors may be driving the long‐term population decline of the species by negatively impacting breeding propensity. Our study shows that distinguishing between different phases of the reproductive cycle is critical for a better understanding of the causes of migratory population declines in a changing world.
Open AccessLow breeding propensity in a declining Arctic‐breeding swan revealed by telemetry data
Many migratory bird populations are declining in the face of habitat degradation and climate change, making it important to identify which stages of their annual cycle are most affected in order to guide conservation measures. The Bewick's Swan Cygnus columbianus bewickii , an Arctic‐breeding waterfowl species, has suffered a dramatic population decline (from approximately 30 000 individuals in 1995 to around 13 000 in 2020) due to low reproductive output. However, it is unknown which component of reproduction (breeding propensity, nesting success and post‐hatching survival) is the underlying cause. We analysed GPS tracking and accelerometer data from over 60 adult female Bewick's Swans collected over 8 years, to derive breeding propensity (i.e. the decision to breed or not) and nesting success (i.e. completing incubation) at the individual level, and assess how these metrics are influenced by onset of spring and migration timing. The odds of breeding increased by 3.9% (estimate = −0.04, se = 0.02, P = 0.04) for each day that the swans arrived earlier at the breeding grounds. The odds of successfully nesting increased by 5.8% (estimate = −0.06, se = 0.03, P = 0.06) per day of earlier snowmelt anomaly, suggesting a slight positive effect of climate warming on nesting. However, the proportion of breeding females was consistently low throughout the study period, suggesting that other factors may be driving the long‐term population decline of the species by negatively impacting breeding propensity. Our study shows that distinguishing between different phases of the reproductive cycle is critical for a better understanding of the causes of migratory population declines in a changing world.
- Open Access
- 19 February 2026
- Published by Elsevier in SSRN Electronic Journal
Plastic biovectoring by two closely-related gull species to coastal marshes
Plastic pollution is a global threat to biodiversity. While physical factors are well known, the role of animals in the spread of plastic is less understood. Here, we compared the role of two closely related gull species with different migratory behaviour, dispersive patterns, and habitat use—the yellow-legged gull (Larus michahellis) and the lesser black-backed gull (Larus fuscus)— as biovectors of plastics to a coastal Ramsar site in southwestern Spain. We quantified and characterized plastic present in pellets of both species. We combined pellet analyses with individual movements tracked by GPS and census data to estimate the amount plastic imported, in terms of mass and number of items. 89.9% of pellets contained plastics, mostly as microplastics (< 5 mm), or other anthropogenic debris, with significant differences in plastic polymers and morphotypes between species. Differences in habitat selection between both species explained much of this variation: yellow-legged gulls were associated to urban habitats whereas lesser black-backed gulls relied heavily on landfills. We estimated that during winter ~270 kg of plastics (over 8.1 million plastic particles) were transported by both species into the protected area. Lesser black backed gulls transported plastics from further away and a greater quantity than yellow-legged gull, and plastic load was spatially heterogeneous. These findings show that the two gull species act differently as biovectors of plastic pollution, linking human-modified environments with ecologically important wetlands, creating plastic hotspots far from the source areas. Understanding these pathways of plastic transport is essential for developing management strategies that address waste control.
- 19 February 2026
- Published by Elsevier in SSRN Electronic Journal
Open AccessPlastic biovectoring by two closely-related gull species to coastal marshes
Plastic pollution is a global threat to biodiversity. While physical factors are well known, the role of animals in the spread of plastic is less understood. Here, we compared the role of two closely related gull species with different migratory behaviour, dispersive patterns, and habitat use—the yellow-legged gull (Larus michahellis) and the lesser black-backed gull (Larus fuscus)— as biovectors of plastics to a coastal Ramsar site in southwestern Spain. We quantified and characterized plastic present in pellets of both species. We combined pellet analyses with individual movements tracked by GPS and census data to estimate the amount plastic imported, in terms of mass and number of items. 89.9% of pellets contained plastics, mostly as microplastics (< 5 mm), or other anthropogenic debris, with significant differences in plastic polymers and morphotypes between species. Differences in habitat selection between both species explained much of this variation: yellow-legged gulls were associated to urban habitats whereas lesser black-backed gulls relied heavily on landfills. We estimated that during winter ~270 kg of plastics (over 8.1 million plastic particles) were transported by both species into the protected area. Lesser black backed gulls transported plastics from further away and a greater quantity than yellow-legged gull, and plastic load was spatially heterogeneous. These findings show that the two gull species act differently as biovectors of plastic pollution, linking human-modified environments with ecologically important wetlands, creating plastic hotspots far from the source areas. Understanding these pathways of plastic transport is essential for developing management strategies that address waste control.
- Open Access
A Semi-Supervised Pipeline for Generalized Behavior Discovery from Animal-Borne Motion Time Series
Learning behavioral taxonomies from animal-borne sensors is challenging because labels are scarce, classes are highly imbalanced, and behaviors may be absent from the annotated set. We study generalized behavior discovery in short multivariate motion snippets from gulls, where each sample is a sequence with 3-axis IMU acceleration (20 Hz) and GPS speed, spanning nine expert-annotated behavior categories. We propose a semi-supervised discovery pipeline that (i) learns an embedding function from the labeled subset, (ii) performs label-guided clustering over embeddings of both labeled and unlabeled samples to form candidate behavior groups, and (iii) decides whether a discovered group is truly novel using a containment score. Our key contribution is a KDE + HDR (highest-density region) containment score that measures how much a discovered cluster distribution is contained within, or contains, each known-class distribution; the best-match containment score serves as an interpretable novelty statistic. In experiments where an entire behavior is withheld from supervision and appears only in the unlabeled pool, the method recovers a distinct cluster and the containment score flags novelty via low overlap, while a negative-control setting with no novel behavior yields consistently higher overlaps. These results suggest that HDR-based containment provides a practical, quantitative test for generalized class discovery in ecological motion time series under limited annotation and severe class imbalance.
Open AccessA Semi-Supervised Pipeline for Generalized Behavior Discovery from Animal-Borne Motion Time Series
Learning behavioral taxonomies from animal-borne sensors is challenging because labels are scarce, classes are highly imbalanced, and behaviors may be absent from the annotated set. We study generalized behavior discovery in short multivariate motion snippets from gulls, where each sample is a sequence with 3-axis IMU acceleration (20 Hz) and GPS speed, spanning nine expert-annotated behavior categories. We propose a semi-supervised discovery pipeline that (i) learns an embedding function from the labeled subset, (ii) performs label-guided clustering over embeddings of both labeled and unlabeled samples to form candidate behavior groups, and (iii) decides whether a discovered group is truly novel using a containment score. Our key contribution is a KDE + HDR (highest-density region) containment score that measures how much a discovered cluster distribution is contained within, or contains, each known-class distribution; the best-match containment score serves as an interpretable novelty statistic. In experiments where an entire behavior is withheld from supervision and appears only in the unlabeled pool, the method recovers a distinct cluster and the containment score flags novelty via low overlap, while a negative-control setting with no novel behavior yields consistently higher overlaps. These results suggest that HDR-based containment provides a practical, quantitative test for generalized class discovery in ecological motion time series under limited annotation and severe class imbalance.
- Open Access
- 17 December 2025
- Published by The Royal Society in Proceedings Of The Royal Society B-Biological Sciences
- Vol. 292 (2061)
Habitat selection of three gull species in response to sudden changes in human mobility
Developing robust strategies for human–wildlife coexistence is hampered by our limited understanding of how humans impact animal space use. It is challenging to measure the relative effects of landscape modification and human mobility on wildlife, since these factors are typically confounded. The extreme change in human mobility levels that occurred during COVID-19 lockdowns provided an opportunity to disentangle these impacts. Many gull species are considered urban adapters, capable of roosting, foraging and breeding near humans in highly modified environments. We predicted that lockdown-induced changes in human mobility would affect gulls’ selection for urban and beach habitats because of altered disturbance levels and food availability. We analysed GPS tracking data from 113 individual gulls over multiple years (2015–2022), across three species in western Europe (herring gull Larus argentatus, lesser black-backed gull L. fuscus and yellow-legged gull L. michahellis). We found that, during lockdowns, selection for urban areas increased in two of ten colonies and selection for beaches increased in one colony and decreased in two others. This heterogeneous pattern likely reflects differences in how gull populations respond to opportunities and challenges presented by human-modified landscapes. Understanding this context dependence is emerging as a priority for coordinated efforts to promote sustainable human–wildlife coexistence.
- 17 December 2025
- Published by The Royal Society in Proceedings Of The Royal Society B-Biological Sciences
- Vol. 292 (2061)
Open AccessHabitat selection of three gull species in response to sudden changes in human mobility
Developing robust strategies for human–wildlife coexistence is hampered by our limited understanding of how humans impact animal space use. It is challenging to measure the relative effects of landscape modification and human mobility on wildlife, since these factors are typically confounded. The extreme change in human mobility levels that occurred during COVID-19 lockdowns provided an opportunity to disentangle these impacts. Many gull species are considered urban adapters, capable of roosting, foraging and breeding near humans in highly modified environments. We predicted that lockdown-induced changes in human mobility would affect gulls’ selection for urban and beach habitats because of altered disturbance levels and food availability. We analysed GPS tracking data from 113 individual gulls over multiple years (2015–2022), across three species in western Europe (herring gull Larus argentatus, lesser black-backed gull L. fuscus and yellow-legged gull L. michahellis). We found that, during lockdowns, selection for urban areas increased in two of ten colonies and selection for beaches increased in one colony and decreased in two others. This heterogeneous pattern likely reflects differences in how gull populations respond to opportunities and challenges presented by human-modified landscapes. Understanding this context dependence is emerging as a priority for coordinated efforts to promote sustainable human–wildlife coexistence.
- Open Access
- 28 October 2025
- Published by Elsevier in Journal of Environmental Management
- Vol. 395, 127753
Large-scale mapping of nocturnal bird migration to accelerate a nature-inclusive energy transition
- 28 October 2025
- Published by Elsevier in Journal of Environmental Management
- Vol. 395, 127753
Open AccessLarge-scale mapping of nocturnal bird migration to accelerate a nature-inclusive energy transition
- Open Access
- 22 September 2025
- Published by Elsevier in Trends in Ecology & Evolution
- Vol. 40 (11) , 1101-1112
Animal niches in the airspace
- 22 September 2025
- Published by Elsevier in Trends in Ecology & Evolution
- Vol. 40 (11) , 1101-1112
Open AccessAnimal niches in the airspace