Parisa Mohammadi
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Parisa Mohammadi has a total of 96 co-authors. Here are the top co-authors by number of shared publications:
Azam Aliasghari Veshareh
3 shared publications- Gholamreza Zarrini
Department of Animal Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran
3 shared publications - Parinaz Ghadam
Department of Biotechnology, Faculty of Biological Sciences, Alzahra University, Tehran, Iran.
3 shared publications - Ahya Abdi Ali
Department of Microbiology, Faculty of Biological Sciences, Alzahra University, Tehran, Iran
2 shared publications Ameneh Elikaei
Department of Microbiology, Faculty of Biological Sciences, Alzahra University, Tehran, Iran; Research Center for Applied Microbiology and Microbial Biotechnology, Alzahra University, Tehran, Iran
2 shared publications- Ameneh Elikaei
Department of Microbiology, Faculty of Biological Sciences, Alzahra University, Tehran, Iran
2 shared publications
Latest Publications
- Open Access
- 4 May 2026
- Published by Springer Nature in npj Heritage Science
- Vol. 14 (1)
A bibliometric review of lichens in cultural heritage: biodeteriorative/bioprotective roles, and their removal methods
- 4 May 2026
- Published by Springer Nature in npj Heritage Science
- Vol. 14 (1)
Open AccessA bibliometric review of lichens in cultural heritage: biodeteriorative/bioprotective roles, and their removal methods
- Open Access
- 18 February 2026
- Published by Springer Nature in Scientific Reports
- Vol. 16 (1)
Improved uranium bioleaching in brackish environments via microbial consortium using RSM based modelling and optimization
Bioleaching is a prominent method among eco-friendly techniques. The efficiency of bioleaching is reduced by the presence of brackish water. Moreover, it has been reported that the most successful bioleaching systems are those that include both autotrophic and heterotrophic microorganismes. This research focuses on enhancing uranium bioleaching in brackish waters using the halotolerant bacterium Acidithiobacillus ferrooxidans strain THA4 and the fungus Rhodotorula toruloides strain IR-1395. The experimental data were modeled by the Response Surface Methodology (RSM) approach. The suggested model for uranium extraction in a brackish environment using microorganisms demonstrated an alignment with the experimental data, with a correlation coefficient of R2 = 0.94. The results showed that the amount of uranium bioleaching by the consortium increased by 24.22%, compared to the bacterium alone under the optimal conditions suggested by the software. The study employed SEM–EDS to investigate the morphological changes in ore samples exposed to the microorganisms. The findings offer insights into the relationship dynamics between acidophilic bacteria and heterotrophic yeasts in uranium bioleaching of brackish waters. Finally, this study has improved biohydrometallurgical methods for uranium extraction from low-grade ores, especially in saline and low-resources conditions.
- 18 February 2026
- Published by Springer Nature in Scientific Reports
- Vol. 16 (1)
Open AccessImproved uranium bioleaching in brackish environments via microbial consortium using RSM based modelling and optimization
Bioleaching is a prominent method among eco-friendly techniques. The efficiency of bioleaching is reduced by the presence of brackish water. Moreover, it has been reported that the most successful bioleaching systems are those that include both autotrophic and heterotrophic microorganismes. This research focuses on enhancing uranium bioleaching in brackish waters using the halotolerant bacterium Acidithiobacillus ferrooxidans strain THA4 and the fungus Rhodotorula toruloides strain IR-1395. The experimental data were modeled by the Response Surface Methodology (RSM) approach. The suggested model for uranium extraction in a brackish environment using microorganisms demonstrated an alignment with the experimental data, with a correlation coefficient of R2 = 0.94. The results showed that the amount of uranium bioleaching by the consortium increased by 24.22%, compared to the bacterium alone under the optimal conditions suggested by the software. The study employed SEM–EDS to investigate the morphological changes in ore samples exposed to the microorganisms. The findings offer insights into the relationship dynamics between acidophilic bacteria and heterotrophic yeasts in uranium bioleaching of brackish waters. Finally, this study has improved biohydrometallurgical methods for uranium extraction from low-grade ores, especially in saline and low-resources conditions.
- Open Access
- 26 November 2025
- Published by Springer Nature in npj Materials Degradation
- Vol. 9 (1) , 151
Biofilm driven bioweathering on limestone; a humidity dependent process
Phototrophic microorganisms, particularly cyanobacteria, are involved in biogeochemical cycles that alter the environment. They participate in processes such as bioweathering and biomineralization on various substrates, specifically carbonate rocks. This study investigates the interactions of phototrophic biofilms with the limestone substrate of Pasargadae, the UNESCO World Heritage Site in Iran. The initial survey revealed bedrock alterations including microfracturing, detachment, and localized mineral dissolution related to phototrophic biofilms. Further analyses showed the dominance of cyanobacteria, particularly Chroococcidiopsis spp., in endolithic biofilms. Six months of laboratory experiments with inoculation of limestone samples with Chroococcidiopsis sp., under controlled hydration-desiccation regimes and various constant humidities (29.5–100% RH) were conducted. The results demonstrated the formation of rhombohedral crystals of CaCO 3 by Chroococcidiopsis sp., on limestone samples in the hydration-dessication period and 100% humidity. The present study links cyanobacterial activity to carbonate dissolution-precipitation dynamics and rock bioweathering in the semiarid region of Pasargadae. In addition, these findings highlight the crucial role of water availability in biofilm-driven weathering of calcium carbonate. Further research is needed to clarify microbial community-level interactions.
- 26 November 2025
- Published by Springer Nature in npj Materials Degradation
- Vol. 9 (1) , 151
Open AccessBiofilm driven bioweathering on limestone; a humidity dependent process
Phototrophic microorganisms, particularly cyanobacteria, are involved in biogeochemical cycles that alter the environment. They participate in processes such as bioweathering and biomineralization on various substrates, specifically carbonate rocks. This study investigates the interactions of phototrophic biofilms with the limestone substrate of Pasargadae, the UNESCO World Heritage Site in Iran. The initial survey revealed bedrock alterations including microfracturing, detachment, and localized mineral dissolution related to phototrophic biofilms. Further analyses showed the dominance of cyanobacteria, particularly Chroococcidiopsis spp., in endolithic biofilms. Six months of laboratory experiments with inoculation of limestone samples with Chroococcidiopsis sp., under controlled hydration-desiccation regimes and various constant humidities (29.5–100% RH) were conducted. The results demonstrated the formation of rhombohedral crystals of CaCO 3 by Chroococcidiopsis sp., on limestone samples in the hydration-dessication period and 100% humidity. The present study links cyanobacterial activity to carbonate dissolution-precipitation dynamics and rock bioweathering in the semiarid region of Pasargadae. In addition, these findings highlight the crucial role of water availability in biofilm-driven weathering of calcium carbonate. Further research is needed to clarify microbial community-level interactions.
- 15 November 2025
- Published by Taylor & Francis in Bioremediation Journal
- p. 1-17
BTEX biodegradation: a glance at the experimental medium and unsaturated zone soil
- 15 November 2025
- Published by Taylor & Francis in Bioremediation Journal
- p. 1-17
BTEX biodegradation: a glance at the experimental medium and unsaturated zone soil
- 11 October 2025
- Published by Springer Nature in Journal of Radioanalytical and Nuclear Chemistry
- Vol. 334 (10) , 7217-7229
Optimization of uranium bioleaching by a salt-tolerant Acidithiobacillus ferrooxidans using response surface methodology
- 11 October 2025
- Published by Springer Nature in Journal of Radioanalytical and Nuclear Chemistry
- Vol. 334 (10) , 7217-7229
Optimization of uranium bioleaching by a salt-tolerant Acidithiobacillus ferrooxidans using response surface methodology
- Open Access
- 3 May 2025
- Published by Springer Nature in npj Heritage Science
- Vol. 13 (1) , 1-7
Hydrogels containing Thymus vulgaris essential oil as a novel approach for cleaning monument glazed tiles
Preservation of ancient works is one of the most important concerns of those interested in cultural heritage. Restorers use various physicochemical and biological methods to preserve and/or clean ancient objects. One of the cleaning methods is using herbal essential oils (EOs). Since EOs are often volatile, their incorporation into polymers can mitigate this drawback. Here, the antimicrobial properties of Thymus vulgaris EO were evaluated through the disk diffusion method against microbial strains, which had been isolated from our previous work. To reduce its volatility, two commercial polymers, alginate and polyvinyl alcohol, were used, and their antimicrobial properties were evaluated. Next, the tests were done on tile models. The results showed that the EO was effective against all selected microbial strains. Furthermore, alginate hydrogel containing EO showed the best antimicrobial activity, suggesting its potential as an effective cleaning method. Further investigation is necessary to ensure that this hydrogel has no undesirable impacts on historical substrates.
- 3 May 2025
- Published by Springer Nature in npj Heritage Science
- Vol. 13 (1) , 1-7
Open AccessHydrogels containing Thymus vulgaris essential oil as a novel approach for cleaning monument glazed tiles
Preservation of ancient works is one of the most important concerns of those interested in cultural heritage. Restorers use various physicochemical and biological methods to preserve and/or clean ancient objects. One of the cleaning methods is using herbal essential oils (EOs). Since EOs are often volatile, their incorporation into polymers can mitigate this drawback. Here, the antimicrobial properties of Thymus vulgaris EO were evaluated through the disk diffusion method against microbial strains, which had been isolated from our previous work. To reduce its volatility, two commercial polymers, alginate and polyvinyl alcohol, were used, and their antimicrobial properties were evaluated. Next, the tests were done on tile models. The results showed that the EO was effective against all selected microbial strains. Furthermore, alginate hydrogel containing EO showed the best antimicrobial activity, suggesting its potential as an effective cleaning method. Further investigation is necessary to ensure that this hydrogel has no undesirable impacts on historical substrates.
- Open Access
- 1 April 2025
- Published by InkVista Publishing House
- Vol. 10 (1) , 41-46
Diagnosis of aerobic vaginitis in pregnant women
Background: Aerobic vaginitis (AV) is a type of genital infection, which affects women's health. Aerobic vaginitis was first identified as a cause of genital infection in 2002. The most common bacteria associated with aerobic vaginitis in previous studies were Enterococcus faecalis, Escherichia coli, Staphylococcus aureus and coagulase-negative Staphylococci. Materials and Methods: A total ...
- 1 April 2025
- Published by InkVista Publishing House
- Vol. 10 (1) , 41-46
Open AccessDiagnosis of aerobic vaginitis in pregnant women
Background: Aerobic vaginitis (AV) is a type of genital infection, which affects women's health. Aerobic vaginitis was first identified as a cause of genital infection in 2002. The most common bacteria associated with aerobic vaginitis in previous studies were Enterococcus faecalis, Escherichia coli, Staphylococcus aureus and coagulase-negative Staphylococci. Materials and Methods: A total ...
- 24 February 2025
- Published by Taylor & Francis in Geomicrobiology Journal
- Vol. 42 (5) , 374-380
Evaluating Biodeteriogenic Microorganisms’ Impacts on the Brick Surfaces of Cultural Heritage
- 24 February 2025
- Published by Taylor & Francis in Geomicrobiology Journal
- Vol. 42 (5) , 374-380
Evaluating Biodeteriogenic Microorganisms’ Impacts on the Brick Surfaces of Cultural Heritage
- 22 January 2025
- Published by Maad Rayan Publishing Company in Journal of Advances in Environmental Health Research
- Vol. 13 (1) , 45-50
Silver Nanoparticles in Antifungal Applications: A Comparison of Biosynthesized and Physical Synthesized Nanoparticles on Paper-Biodegrading Fungi
Background: Paper substrates are highly susceptible to fungal degradation, as fungi produce enzymes that decompose paper materials. This study investigates and compares the antifungal efficacy of silver nanoparticles (AgNPs) synthesized through various physical and biological methods. The fungal strains tested, Penicillium sp. and Aspergillus sp., were isolated from paper samples in a previous study, chosen for their more prevalence in contaminated paper. Methods: Five types of AgNPs, synthesized using both biological and physical methods, were evaluated. The biological methods involved the use of extracts from Juglans regia green husk, Malva sylvestris leaves, and cyanobacterial cells. The minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) of the AgNPs were determined using standard protocols. Results: The MIC values of the AgNPs synthesized from different sources exhibited varying degrees of antifungal activity against the tested fungi. The AgNPs’ effectiveness ranked as follows: (1) AgNPs produced by Nostoc pruniforme, (2) AgNPs produced by M. sylvestris, (3) AgNPs produced by Nostoc IBRC-M5064, (4) AgNPs produced by J. regia, and (5) physically synthesized AgNPs. Conclusion: These findings highlight the potential of biologically synthesized AgNPs as environmentally friendly biocidal agents for preventing and controlling paper biodegradation.
- 22 January 2025
- Published by Maad Rayan Publishing Company in Journal of Advances in Environmental Health Research
- Vol. 13 (1) , 45-50
Silver Nanoparticles in Antifungal Applications: A Comparison of Biosynthesized and Physical Synthesized Nanoparticles on Paper-Biodegrading Fungi
Background: Paper substrates are highly susceptible to fungal degradation, as fungi produce enzymes that decompose paper materials. This study investigates and compares the antifungal efficacy of silver nanoparticles (AgNPs) synthesized through various physical and biological methods. The fungal strains tested, Penicillium sp. and Aspergillus sp., were isolated from paper samples in a previous study, chosen for their more prevalence in contaminated paper. Methods: Five types of AgNPs, synthesized using both biological and physical methods, were evaluated. The biological methods involved the use of extracts from Juglans regia green husk, Malva sylvestris leaves, and cyanobacterial cells. The minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) of the AgNPs were determined using standard protocols. Results: The MIC values of the AgNPs synthesized from different sources exhibited varying degrees of antifungal activity against the tested fungi. The AgNPs’ effectiveness ranked as follows: (1) AgNPs produced by Nostoc pruniforme, (2) AgNPs produced by M. sylvestris, (3) AgNPs produced by Nostoc IBRC-M5064, (4) AgNPs produced by J. regia, and (5) physically synthesized AgNPs. Conclusion: These findings highlight the potential of biologically synthesized AgNPs as environmentally friendly biocidal agents for preventing and controlling paper biodegradation.
- 31 December 2024
- Published by Elsevier in Fungal Biology
- Vol. 129 (1) , 101534
Isolation and characterization of native fungal strains for the bioremediation of BTEX pollutants
- 31 December 2024
- Published by Elsevier in Fungal Biology
- Vol. 129 (1) , 101534
Isolation and characterization of native fungal strains for the bioremediation of BTEX pollutants