Pamela Stanley
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Pamela Stanley has a total of 380 co-authors. Here are the top co-authors by number of shared publications:
Subha Sundaram
Department Cell Biology, Albert Einstein College of Medicine, New York, New York, USA
14 shared publicationsShaolin Shi
13 shared publicationsBarry Potvin
Marion Bessin Liver Research Center, Albert Einstein College of Medicine, New York, New York, United States of America
9 shared publicationsShweta Varshney
Department Cell Biology, Albert Einstein College of Medicine, New York, New York, USA
8 shared publications- Linchao Lu
Baylor College of Medicine, Texas Children's Hospital, Houston, TX
6 shared publications - Suzannah A. Williams
Nuffield Department of Women’s and Reproductive Health, University of Oxford, Oxford, UK
6 shared publications
Latest Publications
- Open Access
- 9 June 2026
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - General Subjects
- Vol. 1870 (9) , 130967
Absence of EOGT precludes defective development in fringe-null mouse intestine
- 9 June 2026
- Published by Elsevier in Biochimica et Biophysica Acta (BBA) - General Subjects
- Vol. 1870 (9) , 130967
Open AccessAbsence of EOGT precludes defective development in fringe-null mouse intestine
- Open Access
Absence of EOGT Precludes Defective Development in Fringe-null Mouse Intestine
Identifying biological roles for glycosyltransferases is a continuing challenge and important for defining morbidities associated with congenital disorders of glycosylation. Here we investigate the consequences to intestinal development of conditionally deleting Lfng alone or Lfng, Mfng and Rfng together in a mixed or Eogt -null genetic background. Each Fringe transfers N-acetylglucosamine (GlcNAc) to fucose (Fuc) attached to Ser or Thr by POFUT1 in a consensus sequence found in certain epithelial growth factor-like (EGF) repeats. EOGT transfers GlcNAc directly to Ser/Thr in a separate consensus sequence of the EGF repeat. Notch receptors and Notch ligands contain the largest number of EGF repeats with consensus sites for these O-glycans. Conditional deletion of Pofut1 in mouse intestine causes similar developmental defects to deletion of Notch1 and Notch2 or Dll1 and Dll4 . LFNG also contributes to optimal Notch signaling in mouse intestine. In this work, we generated Lfng [F/F]: Villin -Cre and Lfng [F/F] Mfng [-/-] Rfng [-/-]: Villin -Cre mice in which extension of O-Fuc on EGF repeats was inhibited or prevented in intestinal epithelium. Conditional deletion of either Lfng alone or all three Fringe activities together led to defective intestinal development with a marked increase in goblet and Paneth cells, increased crypt width and reduced villus length. Unexpectedly, in mice globally lacking EOGT, conditional inactivation of the three Fringe genes did not lead to defective intestinal development. Thus, the absence of EOGT prevented disruption of development in Fringe-null intestine, identifying a novel role for EOGT in regulating intestinal development.
Open AccessAbsence of EOGT Precludes Defective Development in Fringe-null Mouse Intestine
Identifying biological roles for glycosyltransferases is a continuing challenge and important for defining morbidities associated with congenital disorders of glycosylation. Here we investigate the consequences to intestinal development of conditionally deleting Lfng alone or Lfng, Mfng and Rfng together in a mixed or Eogt -null genetic background. Each Fringe transfers N-acetylglucosamine (GlcNAc) to fucose (Fuc) attached to Ser or Thr by POFUT1 in a consensus sequence found in certain epithelial growth factor-like (EGF) repeats. EOGT transfers GlcNAc directly to Ser/Thr in a separate consensus sequence of the EGF repeat. Notch receptors and Notch ligands contain the largest number of EGF repeats with consensus sites for these O-glycans. Conditional deletion of Pofut1 in mouse intestine causes similar developmental defects to deletion of Notch1 and Notch2 or Dll1 and Dll4 . LFNG also contributes to optimal Notch signaling in mouse intestine. In this work, we generated Lfng [F/F]: Villin -Cre and Lfng [F/F] Mfng [-/-] Rfng [-/-]: Villin -Cre mice in which extension of O-Fuc on EGF repeats was inhibited or prevented in intestinal epithelium. Conditional deletion of either Lfng alone or all three Fringe activities together led to defective intestinal development with a marked increase in goblet and Paneth cells, increased crypt width and reduced villus length. Unexpectedly, in mice globally lacking EOGT, conditional inactivation of the three Fringe genes did not lead to defective intestinal development. Thus, the absence of EOGT prevented disruption of development in Fringe-null intestine, identifying a novel role for EOGT in regulating intestinal development.
- Open Access
- 19 September 2024
- Published by Frontiers Media SA in Frontiers in Cell and Developmental Biology
- Vol. 12, 1428715
Deletion of Mgat2 in spermatogonia blocks spermatogenesis
Identifying factors required for spermatogenesis is important for understanding mechanisms of male fertility. Inactivation of either the Mgat1 or Man2a2 gene leads to a block in spermatogenesis causing infertility in male mice. MGAT1 GlcNAc-transferase initiates complex N-glycan synthesis and MAN2A2 mannosidase generates the substrate for MGAT2 GlcNAc-transferase to form a biantennary complex N-glycan. In this paper, we show that conditional deletion of Mgat2 in spermatogonia via Stra8-iCre caused a novel block in spermatogenesis, largely prior to the formation of round spermatids. Mgat2[−/−] germ cells did not bind the lectins Phaseolus vulgaris leucoagglutinin (L-PHA) or Griffonia simplicifolia II (GSA-II), similar to germ cells lacking MGAT1 and complex N-glycans. However, overall spermatogenic defects were distinct in germ cells with deleted Mgat2 versus Mgat1. In addition, RNA-seq analysis at 15 days after birth revealed a unique transcriptomic landscape in Mgat2[−/−] germ cells with genes required for sperm formation and functions being most downregulated. Bioinformatic analyses using the ingenuity pathway analysis (IPA) algorithm identified ERK and AKT as central activities. Western blot analyses of 15-day germ cell lysates confirmed that both AKT and ERK1/2 signaling were increased by loss of MGAT2 in germ cells. By contrast, Mgat1[−/−] germ cells were previously shown to have reduced ERK signaling and unchanged AKT activity. Therefore, since the loss of all complex N-glycans is common to each mutant model, the different immature N-glycans that accumulate in Mgat2[−/−] versus Mgat1[−/−] germ cells are proposed to be the basis of their unique spermatogenic phenotypes.
- 19 September 2024
- Published by Frontiers Media SA in Frontiers in Cell and Developmental Biology
- Vol. 12, 1428715
Open AccessDeletion of Mgat2 in spermatogonia blocks spermatogenesis
Identifying factors required for spermatogenesis is important for understanding mechanisms of male fertility. Inactivation of either the Mgat1 or Man2a2 gene leads to a block in spermatogenesis causing infertility in male mice. MGAT1 GlcNAc-transferase initiates complex N-glycan synthesis and MAN2A2 mannosidase generates the substrate for MGAT2 GlcNAc-transferase to form a biantennary complex N-glycan. In this paper, we show that conditional deletion of Mgat2 in spermatogonia via Stra8-iCre caused a novel block in spermatogenesis, largely prior to the formation of round spermatids. Mgat2[−/−] germ cells did not bind the lectins Phaseolus vulgaris leucoagglutinin (L-PHA) or Griffonia simplicifolia II (GSA-II), similar to germ cells lacking MGAT1 and complex N-glycans. However, overall spermatogenic defects were distinct in germ cells with deleted Mgat2 versus Mgat1. In addition, RNA-seq analysis at 15 days after birth revealed a unique transcriptomic landscape in Mgat2[−/−] germ cells with genes required for sperm formation and functions being most downregulated. Bioinformatic analyses using the ingenuity pathway analysis (IPA) algorithm identified ERK and AKT as central activities. Western blot analyses of 15-day germ cell lysates confirmed that both AKT and ERK1/2 signaling were increased by loss of MGAT2 in germ cells. By contrast, Mgat1[−/−] germ cells were previously shown to have reduced ERK signaling and unchanged AKT activity. Therefore, since the loss of all complex N-glycans is common to each mutant model, the different immature N-glycans that accumulate in Mgat2[−/−] versus Mgat1[−/−] germ cells are proposed to be the basis of their unique spermatogenic phenotypes.
- 9 May 2024
- Published by Springer Nature in Nature Reviews Genetics
- Vol. 25 (10) , 1-15
Genetics of glycosylation in mammalian development and disease
Glycosylation of proteins and lipids in mammals is essential for embryogenesis and the development of all tissues. Analyses of glycosylation mutants in cultured mammalian cells and model organisms have been key to defining glycosylation pathways and the biological functions of glycans. More recently, applications of genome sequencing have revealed the breadth of rare congenital disorders of glycosylation in humans and the influence of genetics on the synthesis of glycans relevant to infectious diseases, cancer progression and diseases of the immune system. This improved understanding of glycan synthesis and functions is paving the way for advances in the diagnosis and treatment of glycosylation-related diseases, including the development of glycoprotein therapeutics through glycosylation engineering.
- 9 May 2024
- Published by Springer Nature in Nature Reviews Genetics
- Vol. 25 (10) , 1-15
Genetics of glycosylation in mammalian development and disease
Glycosylation of proteins and lipids in mammals is essential for embryogenesis and the development of all tissues. Analyses of glycosylation mutants in cultured mammalian cells and model organisms have been key to defining glycosylation pathways and the biological functions of glycans. More recently, applications of genome sequencing have revealed the breadth of rare congenital disorders of glycosylation in humans and the influence of genetics on the synthesis of glycans relevant to infectious diseases, cancer progression and diseases of the immune system. This improved understanding of glycan synthesis and functions is paving the way for advances in the diagnosis and treatment of glycosylation-related diseases, including the development of glycoprotein therapeutics through glycosylation engineering.
- Open Access
- 27 October 2023
- Published by Elsevier in Journal of Biological Chemistry
- Vol. 299 (12) , 105406
In vivo evidence for GDP-fucose transport in the absence of transporter SLC35C1 and putative transporter SLC35C2
- 27 October 2023
- Published by Elsevier in Journal of Biological Chemistry
- Vol. 299 (12) , 105406
Open AccessIn vivo evidence for GDP-fucose transport in the absence of transporter SLC35C1 and putative transporter SLC35C2
- Open Access
- 14 October 2023
- Published by Springer Nature in Scientific Reports
- Vol. 13 (1) , 1-13
EOGT enables residual Notch signaling in mouse intestinal cells lacking POFUT1
Notch signaling determines cell fates in mouse intestine. Notch receptors contain multiple epidermal growth factor-like (EGF) repeats modified by O-glycans that regulate Notch signaling. Conditional deletion of protein O-fucosyltransferase 1 (Pofut1) substantially reduces Notch signaling and markedly perturbs lineage development in mouse intestine. However, mice with inactivated Pofut1 are viable, whereas complete elimination of Notch signaling in intestine is lethal. Here we investigate whether residual Notch signaling enabled by EGF-domain-specific O-linked N-acetylglucosamine transferase (Eogt) permits mice conditionally lacking Pofut1 in intestine to survive. Mice globally lacking Eogt alone were grossly unaffected in intestinal development. In contrast, mice lacking both Eogt and Pofut1 died at ~ 28 days after birth with greater loss of body weight, a greater increase in the number of goblet and Paneth cells, and greater downregulation of the Notch target gene Hes1, compared to Pofut1 deletion alone. These data reveal that both O-fucose and O-GlcNAc glycans are fundamental to Notch signaling in the intestine and provide new insights into roles for O-glycans in regulating Notch ligand binding. Finally, EOGT and O-GlcNAc glycans provide residual Notch signaling and support viability in mice lacking Pofut1 in the intestine.
- 14 October 2023
- Published by Springer Nature in Scientific Reports
- Vol. 13 (1) , 1-13
Open AccessEOGT enables residual Notch signaling in mouse intestinal cells lacking POFUT1
Notch signaling determines cell fates in mouse intestine. Notch receptors contain multiple epidermal growth factor-like (EGF) repeats modified by O-glycans that regulate Notch signaling. Conditional deletion of protein O-fucosyltransferase 1 (Pofut1) substantially reduces Notch signaling and markedly perturbs lineage development in mouse intestine. However, mice with inactivated Pofut1 are viable, whereas complete elimination of Notch signaling in intestine is lethal. Here we investigate whether residual Notch signaling enabled by EGF-domain-specific O-linked N-acetylglucosamine transferase (Eogt) permits mice conditionally lacking Pofut1 in intestine to survive. Mice globally lacking Eogt alone were grossly unaffected in intestinal development. In contrast, mice lacking both Eogt and Pofut1 died at ~ 28 days after birth with greater loss of body weight, a greater increase in the number of goblet and Paneth cells, and greater downregulation of the Notch target gene Hes1, compared to Pofut1 deletion alone. These data reveal that both O-fucose and O-GlcNAc glycans are fundamental to Notch signaling in the intestine and provide new insights into roles for O-glycans in regulating Notch ligand binding. Finally, EOGT and O-GlcNAc glycans provide residual Notch signaling and support viability in mice lacking Pofut1 in the intestine.
- Open Access
- 19 September 2023
- Published by Frontiers Media SA in Frontiers in Immunology
- Vol. 14, 1097332
Synergistic regulation of Notch signaling by different O-glycans promotes hematopoiesis
Glycosylation of Notch receptors by O-fucose glycans regulates Notch ligand binding and Notch signaling during hematopoiesis. However, roles in hematopoiesis for other O-glycans that modify Notch receptors have not been determined. Here we show that the EGF domain specific GlcNAc transferase EOGT is required in mice for the optimal production of lymphoid and myeloid cells. The phenotype of Eogt null mice was largely cell-autonomous, and Notch target gene expression was reduced in T cell progenitors. Moreover, EOGT supported residual Notch signaling following conditional deletion of Pofut1 in hematopoietic stem cells (HSC). Eogt : Pofut1 double mutant HSC had more severe defects in bone marrow and in T and B cell development in thymus and spleen, compared to deletion of Pofut1 alone. The combined results show that EOGT and O-GlcNAc glycans are required for optimal hematopoiesis and T and B cell development, and that they act synergistically with POFUT1 and O-fucose glycans to promote Notch signaling in lymphoid and myeloid differentiation.
- 19 September 2023
- Published by Frontiers Media SA in Frontiers in Immunology
- Vol. 14, 1097332
Open AccessSynergistic regulation of Notch signaling by different O-glycans promotes hematopoiesis
Glycosylation of Notch receptors by O-fucose glycans regulates Notch ligand binding and Notch signaling during hematopoiesis. However, roles in hematopoiesis for other O-glycans that modify Notch receptors have not been determined. Here we show that the EGF domain specific GlcNAc transferase EOGT is required in mice for the optimal production of lymphoid and myeloid cells. The phenotype of Eogt null mice was largely cell-autonomous, and Notch target gene expression was reduced in T cell progenitors. Moreover, EOGT supported residual Notch signaling following conditional deletion of Pofut1 in hematopoietic stem cells (HSC). Eogt : Pofut1 double mutant HSC had more severe defects in bone marrow and in T and B cell development in thymus and spleen, compared to deletion of Pofut1 alone. The combined results show that EOGT and O-GlcNAc glycans are required for optimal hematopoiesis and T and B cell development, and that they act synergistically with POFUT1 and O-fucose glycans to promote Notch signaling in lymphoid and myeloid differentiation.
- 17 August 2023
- Published by H1 Connect
Faculty Opinions recommendation of The SHDRA syndrome-associated gene TMEM260 encodes a protein-specific O-mannosyltransferase.
Identifying a novel glycosyltransferase gene in mammals has become a rare event. Nevertheless, the paper by Larsen et al. describes the identification of the new glycosyltransferase gene TMEM260 which transfers mannose (Man) to a distinct class of substrates. Mutant alleles of TMEM260 cause a congenital disorder termed SHDRA Syndrome, leading to cardiac and renal abnormalities. Going forward, this syndrome will also be called TMEM260-CDG for TMEM260 congenital disorder of glycosylation. The paper identifies two novel mutant alleles in TMEM260 and biochemically characterizes previously known disease mutations. The O-mannosyltransferase activity was originally observed in glycosyltransferase assays as not arising from known O-mannosyltransferases POMT1/POMT2 or TMTC1-4 O-mannosyltransferases, which transfer Man to alpha-dystroglycan and cadherins or protocadherins, respectively {1}. TMEM260 transfers Man to Ser/Thr in immunoglobulin, plexin, transcription factor (IPT) domains present in a subset of growth factor receptors including cMET, RON and plexin receptors. Loss of mannosyltransferase activity gives rise to SHDRA syndrome. The next challenge is to determine why the Man residues added by TMEM260 are necessary for the functioning of IPT-domain containing receptors.
- 17 August 2023
- Published by H1 Connect
Faculty Opinions recommendation of The SHDRA syndrome-associated gene TMEM260 encodes a protein-specific O-mannosyltransferase.
Identifying a novel glycosyltransferase gene in mammals has become a rare event. Nevertheless, the paper by Larsen et al. describes the identification of the new glycosyltransferase gene TMEM260 which transfers mannose (Man) to a distinct class of substrates. Mutant alleles of TMEM260 cause a congenital disorder termed SHDRA Syndrome, leading to cardiac and renal abnormalities. Going forward, this syndrome will also be called TMEM260-CDG for TMEM260 congenital disorder of glycosylation. The paper identifies two novel mutant alleles in TMEM260 and biochemically characterizes previously known disease mutations. The O-mannosyltransferase activity was originally observed in glycosyltransferase assays as not arising from known O-mannosyltransferases POMT1/POMT2 or TMTC1-4 O-mannosyltransferases, which transfer Man to alpha-dystroglycan and cadherins or protocadherins, respectively {1}. TMEM260 transfers Man to Ser/Thr in immunoglobulin, plexin, transcription factor (IPT) domains present in a subset of growth factor receptors including cMET, RON and plexin receptors. Loss of mannosyltransferase activity gives rise to SHDRA syndrome. The next challenge is to determine why the Man residues added by TMEM260 are necessary for the functioning of IPT-domain containing receptors.
- Open Access
EOGT Enables Residual Notch Signaling in Mouse Intestinal Cells Lacking POFUT1
Notch signaling determines cell fates in mouse intestine. Notch receptors contain multiple epidermal growth factor-like (EGF) repeats modified by O-glycans that regulate Notch signaling. Conditional deletion of protein O-fucosyltransferase 1 ( Pofut1 ) substantially reduces Notch signaling and markedly perturbs lineage development in mouse intestine. However, mice with inactivated Pofut1 are viable, whereas complete elimination of Notch signaling in intestine is lethal. Here we investigate whether residual Notch signaling enabled by EOGT permits mice lacking Pofut1 in intestine to survive. Mice globally lacking Eogt alone were grossly unaffected in intestinal development. In contrast, mice lacking both Eogt and Pofut1 died at ∼28 days after birth with greater loss of body weight, a greater increase in the numbers of goblet and Paneth cells, and greater downregulation of Notch target genes, compared to Pofut1 deletion alone. These data establish that both O-fucose and O-GlcNAc glycans are fundamental to Notch signaling in the intestine and provide new insights into roles for O-glycans in regulating Notch ligand binding. Finally, EOGT and O-GlcNAc glycans provide residual Notch signaling and support viability in mice lacking Pofut1 in the intestine.
Open AccessEOGT Enables Residual Notch Signaling in Mouse Intestinal Cells Lacking POFUT1
Notch signaling determines cell fates in mouse intestine. Notch receptors contain multiple epidermal growth factor-like (EGF) repeats modified by O-glycans that regulate Notch signaling. Conditional deletion of protein O-fucosyltransferase 1 ( Pofut1 ) substantially reduces Notch signaling and markedly perturbs lineage development in mouse intestine. However, mice with inactivated Pofut1 are viable, whereas complete elimination of Notch signaling in intestine is lethal. Here we investigate whether residual Notch signaling enabled by EOGT permits mice lacking Pofut1 in intestine to survive. Mice globally lacking Eogt alone were grossly unaffected in intestinal development. In contrast, mice lacking both Eogt and Pofut1 died at ∼28 days after birth with greater loss of body weight, a greater increase in the numbers of goblet and Paneth cells, and greater downregulation of Notch target genes, compared to Pofut1 deletion alone. These data establish that both O-fucose and O-GlcNAc glycans are fundamental to Notch signaling in the intestine and provide new insights into roles for O-glycans in regulating Notch ligand binding. Finally, EOGT and O-GlcNAc glycans provide residual Notch signaling and support viability in mice lacking Pofut1 in the intestine.
- Open Access
- 28 February 2023
- Published by Springer Nature in Scientific Reports
- Vol. 13 (1) , 1-2
Author Correction: MGAT1 and Complex N-Glycans Regulate ERK Signaling During Spermatogenesis
- 28 February 2023
- Published by Springer Nature in Scientific Reports
- Vol. 13 (1) , 1-2
Open AccessAuthor Correction: MGAT1 and Complex N-Glycans Regulate ERK Signaling During Spermatogenesis