Current Organizations / Institutes

The organizations/institutes from the scholar's latest article


Cary Oberije has a total of 405 co-authors. Here are the top co-authors by number of shared publications:

  • Philippe Lambin

    The D-Lab, Department of Precision Medicine, GROW Research Institute for Oncology and Reproduction, Maastricht University, Maastricht, Netherlands

    32 shared publications
  • Dirk De Ruysscher

    A Department of Radiation Oncology (MAASTRO clinic) GROW , School for Oncology and Developmental Biology, Maastricht University Medical Center , Maastricht , The Netherlands

    17 shared publications
  • Andre Dekker

    Department of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, Maastricht, The Netherlands

    14 shared publications
  • Philippe Lambin

    A The D-Lab: Decision Support for Precision Medicine, GROW - School for Oncology and Developmental Biology , Maastricht University Medical Centre+ , Maastricht , the Netherlands

    9 shared publications
  • Bart Reymen

    Department of Radiation Oncology (MAASTRO), GROW - School for Oncology and Developmental Biology, Maastricht University Medical Centre (MUMC), The Netherlands

    7 shared publications
  • Esther G. C. Troost

    Department of Radiotherapy and Radiation Oncology, Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany

    7 shared publications

Latest Publications

  • Open Access

    Prospective evaluation of artificial intelligence integration into breast cancer screening in multiple workflow settings: the GEMINI study

    by Clarisse Florence de Vries, Gerald Lip, Roger Todd Staff, Jaroslaw Artur Dymiter, Benjamin Tse, Annie Ng, Georgia Fox, Cary Oberije, Lesley Ann Anderson

    Artificial intelligence (AI) tools can improve breast screening performance but different screening sites have varying needs. Here the GEMINI prospective evaluation of 10,889 women, within one UK region, used both live AI integration and simulations to model 17 different ways AI could be used in breast screening. All women received routine care. One AI tool was assessed. When the AI tool recommended recall but routine double reading did not, cases underwent additional human review, detecting 11 additional cancers. The primary AI workflow could improve cancer detection by 10.4% (1 per 1,000), maintain the recall rate (0.8% reduction) and reduce workload by up to 31%. Other workflow variations significantly improved all measured metrics (superiority in cancer detection rate, recall rate, positive predictive value (PPV), sensitivity and specificity) with up to 36% workload savings. Different AI integrations in breast screening could offer various clinical and operational gains, allowing for adaptation to local healthcare needs.


  • Open Access

    Improving Patient Engagement in Phase 2 Clinical Trials With a Trial-Specific Patient Decision Aid: Development and Usability Study

    by Iva Halilaj, Relinde Lieverse, Cary Oberije, Lizza Hendriks, Charlotte Billiet, Ines Joye, Brice Van Eeckhout, Anke Wind, Anshu Ankolekar, Philippe Lambin

    Background: Making informed decisions about clinical trial participation can be overwhelming for patients due to the complexity of trial information, potential risks and benefits, and the emotional burden of a recent diagnosis. Patient decision aids (PDAs) simplify this process by providing clear information on treatment options, empowering patients to actively participate in shared decision-making with their doctors. While PDAs have shown promise in various health care contexts, their use in clinical trials, particularly in the form of trial-specific patient decision aids (tPDAs), remains underused. Objective: This study aims to address the challenge of patient comprehension of traditional clinical trial materials. We developed a freely accessible, user-friendly tPDA within the context of the ImmunoSABR phase 2 trial. The tPDA aimed to enhance informed decision-making regarding trial participation. The primary endpoint was usability, quantitatively measured by the System Usability Scale (SUS). Secondary endpoints included time spent on the tPDA, patient satisfaction ratings, and participants’ self-reported level of understanding of the trial. Methods: We developed the tPDA following the International Patient Decision Aid Standards and validated it through a structured, 3-phase iterative evaluation process. An initial evaluation was performed with 17 computer scientists who had expertise in biomedical applications, ensuring technical robustness. The content and usability were further refined through evaluations involving 10 clinicians and 8 medical students, focusing on clinical accuracy and user-friendliness. Finally, the tool was tested by 6 patients eligible for the ImmunoSABR trial to assess real-world applicability and patient-centered design. Results: Evaluations demonstrated the tPDA’s effectiveness in enhancing informed decision-making, directly addressing our primary end point of usability with an overall mean SUS score of 79.4 (SD 15.9), indicative of good usability. Addressing our secondary endpoints, patients completed the tPDA efficiently, with the majority (4/6) finishing in under 30 minutes, and all but 1 within 60 minutes. Qualitative feedback highlighted significant improvements in patients’ understanding of the trial details, reinforcing the tPDA’s role in facilitating better patient engagement and comprehension. Conclusions: Our study demonstrates the feasibility and potential of tPDAs to enhance patient comprehension and engagement in clinical trials. Integrating tPDAs offers a valuable addition to traditional paper-based and verbal communication methods, promoting informed decision-making and patient-centered care.


  • Open Access

    Assessing artificial intelligence in breast screening with stratified results on 306 839 mammograms across geographic regions, age, breast density and ethnicity: A Retrospective Investigation Evaluating Screening (ARIES) study

    by Cary J G Oberije, Rachel Currie, Alice Leaver, Alan Redman, William Teh, Nisha Sharma, Georgia Fox, Ben Glocker, Galvin Khara, Jonathan Nash, et al.

    Objectives: Evaluate an Artificial Intelligence (AI) system in breast screening through stratified results across age, breast density, ethnicity and screening centres, from different UK regions. Methods: A large-scale retrospective study evaluating two variations of using AI as an independent second reader in double reading was executed. Stratifications were conducted for clinical and operational metrics. Data from 306 839 mammography cases screened between 2017 and 2021 were used and included three different UK regions. The impact on safety and effectiveness was assessed using clinical metrics: cancer detection rate and positive predictive value, stratified according to age, breast density and ethnicity. Operational impact was assessed through reading workload and recall rate, measured overall and per centre. Non-inferiority was tested for AI workflows compared with human double reading, and when passed, superiority was tested. AI interval cancer (IC) flag rate was assessed to estimate additional cancer detection opportunity with AI that cannot be assessed retrospectively. Results: The AI workflows passed non-inferiority or superiority tests for every metric across all subgroups, with workload savings between 38.3% and 43.7%. The AI standalone flagged 41.2% of ICs overall, ranging between 33.3% and 46.8% across subgroups, with the highest detection rate for dense breasts. Discussion: Human double reading and AI workflows showed the same performance disparities across subgroups. The AI integrations maintained or improved performance at all metrics for all subgroups while achieving significant workload reduction. Moreover, complementing these integrations with AI as an additional reader can improve cancer detection. Conclusion: The granularity of assessment showed that screening with the AI-system integrations was as safe as standard double reading across heterogeneous populations.


  • Open Access

    Improving Patient Engagement in Phase 2 Clinical Trials with a Trial-specific Patient Decision Aid (tPDA): A Development and Usability Study

    by Iva Halilaj, Relinde I.Y. Lieverse, Cary J.G. Oberije, Lizza E.L. Hendriks, Charlotte Billiet, Ines Joye, Brice van Eeckhout, Anke Wind, Anshu Ankolekar, Philippe Lambin

    Background: Making informed decisions about clinical trial participation can be overwhelming for patients due to the complexity of trial information, potential risks and benefits, and the emotional burden of a recent diagnosis. Patient decision aids (PDAs) simplify this process by providing clear information on treatment options, empowering patients to actively participate in shared decision-making (SDM) with their doctors. While PDAs have shown promise in various healthcare contexts, their use in clinical trials, particularly in the form of trial-specific PDAs (tPDAs), remains underutilized. Objective: To address the challenge of patient comprehension of traditional clinical trial materials, we developed a freely accessible, user-friendly tPDA within the context of the ImmunoSABR phase 2 trial. The tPDA aimed to enhance informed decision-making regarding trial participation. The primary endpoint was usability, quantitatively measured by the System Usability Scale (SUS). Secondary endpoints included time spent on the tPDA, patient satisfaction ratings, and participants’ self-reported level of understanding of the trial. Methods: We developed the tPDA following the International Patient Decision Aid Standards (IPDAS) and validated through a structured, three-phase iterative evaluation process. Initial evaluation was performed with 17 computer scientists who had expertise in biomedical applications, ensuring technical robustness. The content and usability were further refined through evaluations involving 10 clinicians and 8 medical students, focusing on clinical accuracy and user-friendliness. Lastly, the tool was tested by six patients eligible for the ImmunoSABR trial, to assess real-world applicability and patient-centered design. Results: Evaluations demonstrated the tPDA’s effectiveness in enhancing informed decision-making, directly addressing our primary endpoint of usability with an overall mean SUS score of 79.4, indicative of good usability. Addressing our secondary endpoints, patients completed the tPDA efficiently, with the majority (four out of six) finishing in under 30 minutes, and all but one within 60 minutes. The mean satisfaction rating was 9.5 out of 10. Qualitative feedback highlighted significant improvements in patients’ understanding of the trial details, reinforcing the tPDA’s role in facilitating better patient engagement and comprehension. Conclusion: Our study demonstrates the feasibility and potential of tPDAs to enhance patient comprehension and engagement in clinical trials. Integrating tPDAs offers a valuable addition to traditional paper-based and verbal communication methods, promoting informed decision-making and patient-centered care. Trial registration: ImmunoSABR Protocol Code: NL67629.068.18; EudraCT: 2018–002583-11; Clinicaltrials.gov: NCT03705403 and NCT04604470 ; ISRCTN ID: ISRCTN49817477 ; Date of registration: 03-April-2019.

  • Top Cited Papers
    Open Access

    Prospective implementation of AI-assisted screen reading to improve early detection of breast cancer

    by Annie Y. Ng, Cary J. G. Oberije, Éva Ambrózay, Endre Szabó, Orsolya Serfőző, Edit Karpati, Georgia Fox, Ben Glocker, Elizabeth A. Morris, Gábor Forrai, et al.

    Artificial intelligence (AI) has the potential to improve breast cancer screening; however, prospective evidence of the safe implementation of AI into real clinical practice is limited. A commercially available AI system was implemented as an additional reader to standard double reading to flag cases for further arbitration review among screened women. Performance was assessed prospectively in three phases: a single-center pilot rollout, a wider multicenter pilot rollout and a full live rollout. The results showed that, compared to double reading, implementing the AI-assisted additional-reader process could achieve 0.7–1.6 additional cancer detection per 1,000 cases, with 0.16–0.30% additional recalls, 0–0.23% unnecessary recalls and a 0.1–1.9% increase in positive predictive value (PPV) after 7–11% additional human reads of AI-flagged cases (equating to 4–6% additional overall reading workload). The majority of cancerous cases detected by the AI-assisted additional-reader process were invasive (83.3%) and small-sized (≤10 mm, 47.0%). This evaluation suggests that using AI as an additional reader can improve the early detection of breast cancer with relevant prognostic features, with minimal to no unnecessary recalls. Although the AI-assisted additional-reader workflow requires additional reads, the higher PPV suggests that it can increase screening effectiveness.


  • Open Access

    Comparing Prognostic Factors of Cancers Identified by Artificial Intelligence (AI) and Human Readers in Breast Cancer Screening

    by Cary J. G. Oberije, Nisha Sharma, Jonathan J. James, Annie Y. Ng, Jonathan Nash, Peter D. Kecskemethy

    Invasiveness status, histological grade, lymph node stage, and tumour size are important prognostic factors for breast cancer survival. This evaluation aims to compare these features for cancers detected by AI and human readers using digital mammography. Women diagnosed with breast cancer between 2009 and 2019 from three UK double-reading sites were included in this retrospective cohort evaluation. Differences in prognostic features of cancers detected by AI and the first human reader (R1) were assessed using chi-square tests, with significance at p < 0.05. From 1718 screen-detected cancers (SDCs) and 293 interval cancers (ICs), AI flagged 85.9% and 31.7%, respectively. R1 detected 90.8% of SDCs and 7.2% of ICs. Of the screen-detected cancers detected by the AI, 82.5% had an invasive component, compared to 81.1% for R1 (p-0.374). For the ICs, this was 91.5% and 93.8% for AI and R1, respectively (p = 0.829). For the invasive tumours, no differences were found for histological grade, tumour size, or lymph node stage. The AI detected more ICs. In summary, no differences in prognostic factors were found comparing SDC and ICs identified by AI or human readers. These findings support a potential role for AI in the double-reading workflow.


  • Open Access

    Open Source Repository and Online Calculator of Prediction Models for Diagnosis and Prognosis in Oncology

    by Iva Halilaj, Cary Oberije, Avishek Chatterjee, Yvonka van Wijk, Nastaran Mohammadian Rad, Prabash Galganebanduge, Elizaveta Lavrova, Sergey Primakov, Yousif Widaatalla, Anke Wind, et al.

    (1) Background: The main aim was to develop a prototype application that would serve as an open-source repository for a curated subset of predictive and prognostic models regarding oncology, and provide a user-friendly interface for the included models to allow online calculation. The focus of the application is on providing physicians and health professionals with patient-specific information regarding treatment plans, survival rates, and side effects for different expected treatments. (2) Methods: The primarily used models were the ones developed by our research group in the past. This selection was completed by a number of models, addressing the same cancer types but focusing on other outcomes that were selected based on a literature search in PubMed and Medline databases. All selected models were publicly available and had been validated TRIPOD (Transparent Reporting of studies on prediction models for Individual Prognosis Or Diagnosis) type 3 or 2b. (3) Results: The open source repository currently incorporates 18 models from different research groups, evaluated on datasets from different countries. Model types included logistic regression, Cox regression, and recursive partition analysis (decision trees). (4) Conclusions: An application was developed to enable physicians to complement their clinical judgment with user-friendly patient-specific predictions using models that have received internal/external validation. Additionally, this platform enables researchers to display their work, enhancing the use and exposure of their models.


  • Open Access

    Clinician perspectives on clinical decision support systems in lung cancer: Implications for shared decision‐making

    by Anshu Ankolekar, Britt van der Heijden, Andre Dekker, Cheryl Roumen, Dirk De Ruysscher, Bart Reymen, Adriana Berlanga, Cary Oberije, Rianne Fijten

    Background: Lung cancer treatment decisions are typically made among clinical experts in a multidisciplinary tumour board (MTB) based on clinical data and guidelines. The rise of artificial intelligence and cultural shifts towards patient autonomy are changing the nature of clinical decision‐making towards personalized treatments. This can be supported by clinical decision support systems (CDSSs) that generate personalized treatment information as a basis for shared decision‐making (SDM). Little is known about lung cancer patients' treatment decisions and the potential for SDM supported by CDSSs. The aim of this study is to understand to what extent SDM is done in current practice and what clinicians need to improve it.Objective: To explore (1) the extent to which patient preferences are taken into consideration in non‐small‐cell lung cancer (NSCLC) treatment decisions; (2) clinician perspectives on using CDSSs to support SDM.Design: Mixed methods study consisting of a retrospective cohort study on patient deviation from MTB advice and reasons for deviation, qualitative interviews with lung cancer specialists and observations of MTB discussions and patient consultations.Setting and Participants: NSCLC patients (N = 257) treated at a single radiotherapy clinic and nine lung cancer specialists from six Dutch clinics.Results: We found a 10.9% (n = 28) deviation rate from MTB advice; 50% (n = 14) were due to patient preference, of which 85.7% (n = 12) chose a less intensive treatment than MTB advice. Current MTB recommendations are based on clinician experience, guidelines and patients' performance status. Most specialists (n = 7) were receptive towards CDSSs but cited barriers, such as lack of trust, lack of validation studies and time. CDSSs were considered valuable during MTB discussions rather than in consultations.Conclusion: Lung cancer decisions are heavily influenced by clinical guidelines and experience, yet many patients prefer less intensive treatments. CDSSs can support SDM by presenting the harms and benefits of different treatment options rather than giving single treatment advice. External validation of CDSSs should be prioritized.Patient or Public Contribution: This study did not involve patients or the public explicitly; however, the study design was informed by prior interviews with volunteers of a cancer patient advocacy group. The study objectives and data collection were supported by Dutch health care insurer CZ for a project titled ‘My Best Treatment’ that improves patient‐centeredness and the lung cancer patient pathway in the Netherlands.


  • Open Access

    Covid19Risk.ai: An Open Source Repository and Online Calculator of Prediction Models for Early Diagnosis and Prognosis of Covid-19

    by Iva Halilaj, Avishek Chatterjee, Yvonka van Wijk, Guangyao Wu, Brice van Eeckhout, Cary Oberije, Philippe Lambin

    Background: The current pandemic has led to a proliferation of predictive models being developed to address various aspects of COVID-19 patient care. We aimed to develop an online platform that would serve as an open source repository for a curated subset of such models, and provide a simple interface for included models to allow for online calculation. This platform would support doctors during decision-making regarding diagnoses, prognoses, and follow-up of COVID-19 patients, expediting the models’ transition from research to clinical practice. Methods: In this pilot study, we performed a literature search in the PubMed and WHO databases to find suitable models for implementation on our platform. All selected models were publicly available (peer reviewed publications or open source repository) and had been validated (TRIPOD type 3 or 2b). We created a method for obtaining the regression coefficients if only the nomogram was available in the original publication. All predictive models were transcribed on a practical graphical user interface using PHP 8.0.0, and were published online together with supporting documentation and links to the associated articles. Results: The open source website currently incorporates nine models from six different research groups, evaluated on datasets from different countries. The website will continue to be populated with other models related to COVID-19 prediction as these become available. This dynamic platform allows COVID-19 researchers to contact us to have their model curated and included on our website, thereby increasing the reach and real-world impact of their work. Conclusion: We have successfully demonstrated in this pilot study that our website provides an inclusive platform for predictive models related to COVID-19. It enables doctors to supplement their judgment with patient-specific predictions from externally validated models in a user-friendly format. Additionally, this platform supports researchers in showcasing their work, which will increase the visibility and use of their models.


  • Open Access

    Modeling-Based Decision Support System for Radical Prostatectomy Versus External Beam Radiotherapy for Prostate Cancer Incorporating an In Silico Clinical Trial and a Cost–Utility Study

    by Yvonka van Wijk, Bram Ramaekers, Ben G. L. Vanneste, Iva Halilaj, Cary Oberije, Avishek Chatterjee, Tom Marcelissen, Arthur Jochems, Henry C. Woodruff, Philippe Lambin

    The aim of this study is to build a decision support system (DSS) to select radical prostatectomy (RP) or external beam radiotherapy (EBRT) for low- to intermediate-risk prostate cancer patients. We used an individual state-transition model based on predictive models for estimating tumor control and toxicity probabilities. We performed analyses on a synthetically generated dataset of 1000 patients with realistic clinical parameters, externally validated by comparison to randomized clinical trials, and set up an in silico clinical trial for elderly patients. We assessed the cost-effectiveness (CE) of the DSS for treatment selection by comparing it to randomized treatment allotment. Using the DSS, 47.8% of synthetic patients were selected for RP and 52.2% for EBRT. During validation, differences with the simulations of late toxicity and biochemical failure never exceeded 2%. The in silico trial showed that for elderly patients, toxicity has more influence on the decision than TCP, and the predicted QoL depends on the initial erectile function. The DSS is estimated to result in cost savings (EUR 323 (95% CI: EUR 213–433)) and more quality-adjusted life years (QALYs; 0.11 years, 95% CI: 0.00–0.22) than randomized treatment selection.