Dmitry Kulagin
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Research Interests
Dmitry Kulagin has a total of 45 co-authors. Here are the top co-authors by number of shared publications:
- Alexander L. Vereshchaka
Shirshov Institute of Oceanology Russian Academy of Sciences Moscow Russia
13 shared publications - Anastasiia A. Lunina
Shirshov Institute of Oceanology Russian Academy of Sciences Moscow Russia
9 shared publications - Alexandra Nikolaevna Stupnikova
Russian Academy of Sciences
3 shared publications - Anastasiia Lunina
Shirshov Institute of Oceanology, Russian Academy of Sciences, Nakhimovski Prospekt 36, 117997 Moscow, Russia
3 shared publications - Anton M. Tikhomirov
Shirshov Institute of Oceanology, Russian Academy of Sciences, 117218 Moscow, Russia
3 shared publications - Elodie Vourey
Pacific Community—SPC, Taxonomy Laboratory of FAME-OFPEMA, B.P. D5, Noumea 98848, New Caledonia
2 shared publications
Latest Publications
- 24 September 2026
- Published by Wiley in Journal of Biogeography
- Vol. 53 (9) , e70367
Pelagic Filters and Seafloor Anchors: A Hierarchical Model of Diversification in Benthopelagic Shrimps Pasiphaea
Aim: To reconstruct the phylogeny of the genus Pasiphaea across the benthopelagic interface, a unique evolutionary frontier involving migrations between the seafloor and the water column, and to analyse the environmental variables associated with clade separation. Location: Global deep‐sea ecosystems, encompassing both horizontal geographic distributions (latitudinal gradients) and vertical marine dimensions (pelagic water column and seafloor topography). Time Period: Contemporary global distribution data. Major Taxa Studied: Global fauna of the Glass shrimps Pasiphaea (Decapoda: Pasiphaeidae). Methods: Reconstruction of a robust molecular phylogenetic dataset comprising 121 sequences from three genes, integrating available reliable data on the geographical and bathymetric distribution and phylogeny of Pasiphaea , followed by the evaluation of environmental variables associated with clade separation using various statistical models. Results: Primary deep‐scale phylogenetic divergence was linked to pelagic environmental filtering, specifically latitude (as a proxy for temperature and productivity) and pelagic depth (nighttime habitat), which separated a high‐latitude, deep‐mesopelagic lineage (Clade A) from a lower‐latitude, shallower‐dwelling radiation (Clade B). In contrast, secondary diversification into terminal clades was associated with benthic factors, including seafloor geography (vicariance) and bottom depth (daytime habitat). Main Conclusions: We propose a “dual‐link” hierarchical framework for benthopelagic evolution, showing that while pelagic factors explain the broad evolutionary trajectory and deep‐scale divergence of benthopelagic taxa, the seafloor provides the geographic anchors necessary for further terminal speciation. This underscores the critical importance of integrating both vertical and horizontal environmental dimensions to understand the complex mosaic of deep‐sea benthopelagic diversification.
- 24 September 2026
- Published by Wiley in Journal of Biogeography
- Vol. 53 (9) , e70367
Pelagic Filters and Seafloor Anchors: A Hierarchical Model of Diversification in Benthopelagic Shrimps Pasiphaea
Aim: To reconstruct the phylogeny of the genus Pasiphaea across the benthopelagic interface, a unique evolutionary frontier involving migrations between the seafloor and the water column, and to analyse the environmental variables associated with clade separation. Location: Global deep‐sea ecosystems, encompassing both horizontal geographic distributions (latitudinal gradients) and vertical marine dimensions (pelagic water column and seafloor topography). Time Period: Contemporary global distribution data. Major Taxa Studied: Global fauna of the Glass shrimps Pasiphaea (Decapoda: Pasiphaeidae). Methods: Reconstruction of a robust molecular phylogenetic dataset comprising 121 sequences from three genes, integrating available reliable data on the geographical and bathymetric distribution and phylogeny of Pasiphaea , followed by the evaluation of environmental variables associated with clade separation using various statistical models. Results: Primary deep‐scale phylogenetic divergence was linked to pelagic environmental filtering, specifically latitude (as a proxy for temperature and productivity) and pelagic depth (nighttime habitat), which separated a high‐latitude, deep‐mesopelagic lineage (Clade A) from a lower‐latitude, shallower‐dwelling radiation (Clade B). In contrast, secondary diversification into terminal clades was associated with benthic factors, including seafloor geography (vicariance) and bottom depth (daytime habitat). Main Conclusions: We propose a “dual‐link” hierarchical framework for benthopelagic evolution, showing that while pelagic factors explain the broad evolutionary trajectory and deep‐scale divergence of benthopelagic taxa, the seafloor provides the geographic anchors necessary for further terminal speciation. This underscores the critical importance of integrating both vertical and horizontal environmental dimensions to understand the complex mosaic of deep‐sea benthopelagic diversification.
- Open Access
Correction: Tikhomirov et al. Taxonomic Revision of Pasiphaea (Pasiphaeidae: Crustacea) of the Southwest Tropical Pacific with a Description of Eight New Species. Diversity 2025, 17, 656
The present correction concerns the catalogue numbers of the examined material in the paper
Open AccessCorrection: Tikhomirov et al. Taxonomic Revision of Pasiphaea (Pasiphaeidae: Crustacea) of the Southwest Tropical Pacific with a Description of Eight New Species. Diversity 2025, 17, 656
The present correction concerns the catalogue numbers of the examined material in the paper
- Open Access
Taxonomic Revision of Pasiphaea (Pasiphaeidae: Crustacea) of the Southwest Tropical Pacific with a Description of Eight New Species
The genus Pasiphaea Savigny, 1816, comprises a diverse assemblage of meso- to bathypelagic shrimps, currently including 69 valid species. Taxonomic investigations have long been hampered by numerous synonymies and by species known only from their original, overly brief descriptions. Here, we address these deficiencies by examining Pasiphaea specimens collected in the Western and Central Pacific during multiple research cruises using mid-water trawls. Integrating traditional morphological characters (carapace carination, pleonal relief, telson end morphology, and pereopodal dentition) with a novel morphometric framework, we standardized terminology and defined a suite of quantitative measurements across the carapace, pleon, telson, and chelae. In order to corroborate species boundaries, we sequenced three mitochondrial gene markers (COI, 16S rDNA, and 12S rDNA) and calculated genetic distances under the Kimura two-parameter model. This combined approach extended or confirmed the geographic ranges of five described taxa, facilitated the formal description of eight new species, and demonstrated the synonymy of P. gracilis Hayashi, 1999, and P. fragilis Hayashi, 1999. Phylogenetic reconstructions further highlighted cases of pseudocryptic speciation in neighboring bathyal habitats. Our results expose substantial lacunae in the Southwest Pacific Pasiphaea fauna and substantiate the necessity for a comprehensive, genus-level revision. This study thereby contributes to both refining species diagnoses and advancing our understanding of deep-sea crustacean biodiversity.
Open AccessTaxonomic Revision of Pasiphaea (Pasiphaeidae: Crustacea) of the Southwest Tropical Pacific with a Description of Eight New Species
The genus Pasiphaea Savigny, 1816, comprises a diverse assemblage of meso- to bathypelagic shrimps, currently including 69 valid species. Taxonomic investigations have long been hampered by numerous synonymies and by species known only from their original, overly brief descriptions. Here, we address these deficiencies by examining Pasiphaea specimens collected in the Western and Central Pacific during multiple research cruises using mid-water trawls. Integrating traditional morphological characters (carapace carination, pleonal relief, telson end morphology, and pereopodal dentition) with a novel morphometric framework, we standardized terminology and defined a suite of quantitative measurements across the carapace, pleon, telson, and chelae. In order to corroborate species boundaries, we sequenced three mitochondrial gene markers (COI, 16S rDNA, and 12S rDNA) and calculated genetic distances under the Kimura two-parameter model. This combined approach extended or confirmed the geographic ranges of five described taxa, facilitated the formal description of eight new species, and demonstrated the synonymy of P. gracilis Hayashi, 1999, and P. fragilis Hayashi, 1999. Phylogenetic reconstructions further highlighted cases of pseudocryptic speciation in neighboring bathyal habitats. Our results expose substantial lacunae in the Southwest Pacific Pasiphaea fauna and substantiate the necessity for a comprehensive, genus-level revision. This study thereby contributes to both refining species diagnoses and advancing our understanding of deep-sea crustacean biodiversity.
- 1 June 2025
- Published by KMK Scientific Press in Invertebrate Zoology
- Vol. 22 (2) , 340-359
Evolutionary traits of planktonic Eucarida
- 1 June 2025
- Published by KMK Scientific Press in Invertebrate Zoology
- Vol. 22 (2) , 340-359
Evolutionary traits of planktonic Eucarida
- Open Access
Revision of the Global Fauna of Leptochela Stimpson, 1860 (Crustacea: Decapoda), Highlighting Phylogenetic Clades and a New Species
Leptochela Stimpson (1860) is a shallow-water, benthopelagic genus within the predominantly pelagic superfamily Pasiphaeoidea. We inventoried a global fauna of 17 currently valid species of Leptochela and identified a newly discovered eighteenth species. Our analysis combined both morphological and molecular data, using 13 characters (including two multistate characters) and 5 gene markers, respectively. The results revealed incongruence between the molecular and morphological datasets. However, our phylogenetic conclusions were based on a consensus approach, integrating morphological, molecular, and total evidence trees, which revealed three robust clades. We discuss the evolutionary development of quantitative and qualitative morphological traits in Leptochela and explore the potential causes of the incongruence between morphological and molecular signals, particularly in the context of pelagic eucarids transitioning from pelagic to benthopelagic habitats. Additionally, we describe the new species from Madagascar and provide a key to all known species of Leptochela.
Open AccessRevision of the Global Fauna of Leptochela Stimpson, 1860 (Crustacea: Decapoda), Highlighting Phylogenetic Clades and a New Species
Leptochela Stimpson (1860) is a shallow-water, benthopelagic genus within the predominantly pelagic superfamily Pasiphaeoidea. We inventoried a global fauna of 17 currently valid species of Leptochela and identified a newly discovered eighteenth species. Our analysis combined both morphological and molecular data, using 13 characters (including two multistate characters) and 5 gene markers, respectively. The results revealed incongruence between the molecular and morphological datasets. However, our phylogenetic conclusions were based on a consensus approach, integrating morphological, molecular, and total evidence trees, which revealed three robust clades. We discuss the evolutionary development of quantitative and qualitative morphological traits in Leptochela and explore the potential causes of the incongruence between morphological and molecular signals, particularly in the context of pelagic eucarids transitioning from pelagic to benthopelagic habitats. Additionally, we describe the new species from Madagascar and provide a key to all known species of Leptochela.
- 1 December 2024
- Published by Springer Nature in Organisms Diversity & Evolution
- Vol. 24 (4) , 507-532
A global revision of Oplophoroidea (Caridea: Decapoda) with a novel approach for visualizing genetic differences between species
- 1 December 2024
- Published by Springer Nature in Organisms Diversity & Evolution
- Vol. 24 (4) , 507-532
A global revision of Oplophoroidea (Caridea: Decapoda) with a novel approach for visualizing genetic differences between species
- Open Access
- 30 July 2024
- Published by Oxford University Press (OUP) in ICES Journal of Marine Science
- Vol. 82 (6)
Comparative phylogeography and genetic diversity of two co-occurring anti-tropical krill species Hansarsia megalops and Thysanoessa gregaria in the Atlantic Ocean
Hansarsia megalops and Thysanoessa gregaria are two abundant krill species in the warm-temperate belts in the North and South Atlantic. This pattern of disjunct distribution, often referred to as anti-tropical (or bipolar), is a regular phenomenon among marine organisms that can appear at different taxonomic levels. Analysis of spatial genetic diversity based on variation of the mitochondrial cytochrome oxidase I (COI) gene was carried out to understand whether these broadly sympatric krill species have similar patterns in population structure and demographic history. The results suggested that the anti-tropical distribution of both species was driven by trans-equatorial migrations during different historical periods. We observed contrasting differences in genetic diversity between species coupled with similar patterns of genetic diversity and structure in disjunct populations on both sides of the equator. We also found additional genetically distinctive populations of T. gregaria in the South Atlantic in Subantarctic waters and showed that the Southern Subtropical Frontal Zone acts as a strong boundary between two genetically distinctive populations of T. gregaria. The results suggest that both species-specific habitat preferences and interactions between closely related species (congeners) may shape differences in population genetic diversity and structure among species.
- 30 July 2024
- Published by Oxford University Press (OUP) in ICES Journal of Marine Science
- Vol. 82 (6)
Open AccessComparative phylogeography and genetic diversity of two co-occurring anti-tropical krill species Hansarsia megalops and Thysanoessa gregaria in the Atlantic Ocean
Hansarsia megalops and Thysanoessa gregaria are two abundant krill species in the warm-temperate belts in the North and South Atlantic. This pattern of disjunct distribution, often referred to as anti-tropical (or bipolar), is a regular phenomenon among marine organisms that can appear at different taxonomic levels. Analysis of spatial genetic diversity based on variation of the mitochondrial cytochrome oxidase I (COI) gene was carried out to understand whether these broadly sympatric krill species have similar patterns in population structure and demographic history. The results suggested that the anti-tropical distribution of both species was driven by trans-equatorial migrations during different historical periods. We observed contrasting differences in genetic diversity between species coupled with similar patterns of genetic diversity and structure in disjunct populations on both sides of the equator. We also found additional genetically distinctive populations of T. gregaria in the South Atlantic in Subantarctic waters and showed that the Southern Subtropical Frontal Zone acts as a strong boundary between two genetically distinctive populations of T. gregaria. The results suggest that both species-specific habitat preferences and interactions between closely related species (congeners) may shape differences in population genetic diversity and structure among species.
- 2 April 2024
- Published by Elsevier in Molecular Phylogenetics and Evolution
- Vol. 195, 108070
Revision of the ‘Acanthephyra purpurea’ species complex (Crustacea: Decapoda), with an emphasis on species diversification in the Atlantic
- 2 April 2024
- Published by Elsevier in Molecular Phylogenetics and Evolution
- Vol. 195, 108070
Revision of the ‘Acanthephyra purpurea’ species complex (Crustacea: Decapoda), with an emphasis on species diversification in the Atlantic
- 17 January 2024
- Published by CSIRO Publishing in Invertebrate Systematics
- Vol. 38 (1)
An integrative taxonomic approach to the Atlantic Hansarsia (formerly Nematoscelis) yields new krill taxa (Crustacea: Euphausiidae)
A recent molecular phylogenetic and biogeographic study on the krill genus Hansarsia revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in H. microps, H. atlantica and H. tenella. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial COI gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (H3 and ITS1) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic Hansarsia. The strongest divergence was revealed between the two clades of H. tenella, one of which we diagnosed as a new species. Two clades of H. megalops also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in H. microps and H. atlantica are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises. ZooBank: urn:lsid:zoobank.org:pub:AE045636-50EF-450A-B9B3-9231E8B91522
- 17 January 2024
- Published by CSIRO Publishing in Invertebrate Systematics
- Vol. 38 (1)
An integrative taxonomic approach to the Atlantic Hansarsia (formerly Nematoscelis) yields new krill taxa (Crustacea: Euphausiidae)
A recent molecular phylogenetic and biogeographic study on the krill genus Hansarsia revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in H. microps, H. atlantica and H. tenella. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial COI gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (H3 and ITS1) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic Hansarsia. The strongest divergence was revealed between the two clades of H. tenella, one of which we diagnosed as a new species. Two clades of H. megalops also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in H. microps and H. atlantica are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises. ZooBank: urn:lsid:zoobank.org:pub:AE045636-50EF-450A-B9B3-9231E8B91522
- 1 December 2023
- Published by Farwater LLC in Hydrosphere Еcology (Экология гидросферы)
- No. 2(10)
Distribution of deep-sea shrimps of the ‘Acanthephyra purpurea’ species group in the Atlantic Ocean
Экология гидросферы, Гидробиология
- 1 December 2023
- Published by Farwater LLC in Hydrosphere Еcology (Экология гидросферы)
- No. 2(10)
Distribution of deep-sea shrimps of the ‘Acanthephyra purpurea’ species group in the Atlantic Ocean
Экология гидросферы, Гидробиология