Current Organizations / Institutes

The organizations/institutes from the scholar's latest article


Bogdan Zagajewski has a total of 143 co-authors. Here are the top co-authors by number of shared publications:

  • Marlena Kycko

    Department of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, Poland

    13 shared publications
  • Edwin Raczko

    Department of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, Poland

    12 shared publications
  • Anna Jarocińska

    Department of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, Poland

    10 shared publications
  • Adrian Ochtyra

    Department of Geoinformatics, Cartography and Remote Sensing, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, Poland

    7 shared publications
  • Marcin Kluczek

    Department of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warszawa, Poland

    7 shared publications
  • Andrzej Kłos

    Chair of Biotechnology and Molecular Biology, Opole University, ul. kard. B. Kominka 6, 45-032 Opole, Poland, phone +48 77 401 60 42

    5 shared publications

Latest Publications

  • Open Access

    Environmental aspects of remote sensing for the classification of asbestos industry impact on the landscape changes in Cyprus

    by Ewa Wilk, Małgorzata Krówczyńska, Bogdan Zagajewski

    The Industrial Revolution led to the commercial exploitation of asbestos in Cyprus. Cyprus has the second largest asbestos deposits in Europe, after Italy. Even though most of the extracted asbestos was exported, Cyprus had two operational asbestos manufacturing plants. Production increased steadily until 1980, with mining activities ending in 1988. These activities have left a significant mark on the environment. The key example of post-asbestos landscape in Cyprus is the opencast mine at Amiandos in the Limassol District, where large amounts of asbestos were mined. This has had a considerable impact on the natural environment and land use including the disposal of asbestos residues and asbestos-cement waste. Temporal analysis of land use changes from 1963 to 2014 reveals shifts in exploitation areas and vegetation cover. Though challenges persist, including asbestos-containing waste, efforts to restore vegetation in the mine area are evident. The evolution from sparse and undeveloped vegetation to a lush and diverse ecosystem is important for restoring ecological balance and restoring habitats for local fauna and flora. This research provides critical insights into the historical context, environmental impacts, and remediation efforts related to asbestos mining in Cyprus.


  • Open Access

    Combining Multitemporal Optical and Radar Satellite Data for Mapping the Tatra Mountains Non-Forest Plant Communities

    by Marcin Kluczek, Bogdan Zagajewski, Marlena Kycko

    Climate change is significantly affecting mountain plant communities, causing dynamic alterations in species composition as well as spatial distribution. This raises the need for constant monitoring. The Tatra Mountains are the highest range of the Carpathians which are considered biodiversity hotspots in Central Europe. For this purpose, microwave Sentinel-1 and optical multi-temporal Sentinel-2 data, topographic derivatives, and iterative machine learning methods incorporating classifiers random forest (RF), support vector machines (SVMs), and XGBoost (XGB) were used for the identification of thirteen non-forest plant communities (various types of alpine grasslands, shrublands, herbaceous heaths, mountain hay meadows, rocks, and scree communities). Different scenarios were tested to identify the most important variables, retrieval periods, and spectral bands. The overall accuracy results for the individual algorithms reached RF (0.83–0.96), SVM (0.87–0.93), and lower results for XGBoost (0.69–0.82). The best combination, which included a fusion of Sentinel-1, Sentinel-2, and topographic data, achieved F1-scores for classes in the range of 0.73–0.97 (RF) and 0.66–0.95 (SVM). The inclusion of topographic variables resulted in an improvement in F1-scores for Sentinel-2 data by one–four percent points and Sentinel-1 data by 1%–9%. For spectral bands, the Sentinel-2 10 m resolution bands B4, B3, and B2 showed the highest mean decrease accuracy. The final result is the first comprehensive map of non-forest vegetation for the Tatra Mountains area.


  • Open Access

    Sentinel-2 versus PlanetScope Images for Goldenrod Invasive Plant Species Mapping

    by Bogdan Zagajewski, Marcin Kluczek, Karolina Barbara Zdunek, David Holland

    A proliferation of invasive species is displacing native species, occupying their habitats and degrading biodiversity. One of these is the invasive goldenrod (Solidago spp.), characterized by aggressive growth that results in habitat disruption as it outcompetes native plants. This invasiveness also leads to altered soil composition through the release of allelopathic chemicals, complicating control efforts and making it challenging to maintain ecological balance in affected areas. The research goal was to develop methods that allow the analysis of changes in heterogeneous habitats with high accuracy and repeatability. For this reason, we used open source classifiers Support Vector Machine (SVM), Random Forest (RF), and satellite images of Sentinel-2 (free) and PlanetScope (commercial) to assess their potential in goldenrod classification. Due to the fact that invasions begin with invasion footholds, created by small patches of invasive, autochthonous plants and different land cover patterns (asphalt, concrete, buildings) forming heterogeneous areas, we based our studies on field-verified polygons, which allowed the selection of randomized pixels for the training and validation of iterative classifications. The results confirmed that the optimal solution is the use of multitemporal Sentinel-2 images and the RF classifier, as this combination gave F1-score accuracy of 0.92–0.95 for polygons dominated by goldenrod and 0.85–0.89 for heterogeneous areas where goldenrod was in the minority (mix class; smaller share of goldenrod in canopy than autochthonous plants). The mean decrease in the accuracy analysis (MDA), indicating an informativeness of individual spectral bands, showed that Sentinel-2 bands coastal aerosol, NIR, green, SWIR, and red were comparably important, while in the case of PlanetScope data, the NIR and red were definitely the most important, and remaining bands were less informative, and yellow (B5) did not contribute significant information even during the flowering period, when the plant was covered with intensely yellow perianth, and red-edge, coastal aerosol, or green II were much more important. The maximum RF classification values of Sentinel-2 and PlanetScope images for goldenrod are similar (F1-score > 0.9), but the medians are lower for PlanetScope data, especially with the SVM algorithm.


  • Open Access

    Airborne Hyperspectral Images and Machine Learning Algorithms for the Identification of Lupine Invasive Species in Natura 2000 Meadows

    by Anita Sabat-Tomala, Edwin Raczko, Bogdan Zagajewski

    The mapping of invasive plant species is essential for effective ecosystem control and planning, especially in protected areas. One of the widespread invasive plants that threatens the species richness of Natura 2000 habitats in Europe is the large-leaved lupine (Lupinus polyphyllus). In our study, this species was identified at two Natura 2000 sites in southern Poland using airborne HySpex hyperspectral images, and support vector machine (SVM) and random forest (RF) classifiers. Aerial and field campaigns were conducted three times during the 2016 growing season (May, August, and September). An iterative accuracy assessment was performed, and the influence of the number of minimum noise fraction (MNF) bands on the obtained accuracy of lupine identification was analyzed. The highest accuracies were obtained for the August campaign using 30 MNF bands as input data (median F1 score for lupine was 0.82–0.85), with lower accuracies for the May (F1 score: 0.77–0.81) and September (F1 score: 0.78–0.80) campaigns. The use of more than 30 MNF bands did not significantly increase the classification accuracy. The SVM and RF algorithms allowed us to obtain comparable results in both research areas (OA: 89–94%). The method of the multiple classification and thresholding of frequency images allowed the results of many predictions to be included in the final map.


  • Open Access

    Mountain Tree Species Mapping Using Sentinel-2, PlanetScope, and Airborne HySpex Hyperspectral Imagery

    by Marcin Kluczek, Bogdan Zagajewski, Tomasz Zwijacz-Kozica

    Europe’s mountain forests, which are naturally valuable areas due to their high biodiversity and well-preserved natural characteristics, are experiencing major alterations, so an important component of monitoring is obtaining up-to-date information concerning species composition, extent, and location. An important aspect of mapping tree stands is the selection of remote sensing data that vary in temporal, spectral, and spatial resolution, as well as in open and commercial access. For the Tatra Mountains area, which is a unique alpine ecosystem in central Europe, we classified 13 woody species by iterative machine learning methods using random forest (RF) and support vector machine (SVM) algorithms of more than 1000 polygons collected in the field. For this task, we used free Sentinel-2 multitemporal satellite data (10 m pixel size, 12 spectral bands, and 21 acquisition dates), commercial PlanetScope data (3 m pixel size, 8 spectral bands, and 3 acquisitions dates), and airborne HySpex hyperspectral data (2 m pixel size, 430 spectral bands, and a single acquisition) with fusion of the data of topographic derivatives based on Shuttle Radar Topography Mission (SRTM) and airborne laser scanning (ALS) data. The iterative classification method achieved the highest F1-score with HySpex (0.95 RF; 0.92 SVM) imagery, but the multitemporal Sentinel-2 data cube, which consisted of 21 scenes, offered comparable results (0.93 RF; 0.89 SVM). The three images of the high-resolution PlanetScope produced slightly less accurate results (0.89 RF; 0.87 SVM).


  • Open Access

    Sentinel-2 and AISA Airborne Hyperspectral Images for Mediterranean Shrubland Mapping in Catalonia

    by Marlena Kycko, Bogdan Zagajewski, Marcin Kluczek, Anna Tardà, Lydia Pineda, Vicenç Palà, Jordi Corbera

    The Mediterranean ecosystem exhibits a particular geology and climate, which is characterized by mild, rainy winters and long, very hot summers with low precipitation; it has led to the emergence of resilient plant species. Such habitats contain a preponderance of shrubs, and collectively harbor 10% of the Earth’s species, thus containing some of the most unique shrubby formations protecting against environmental natural degradation. Due to shrub species diversity, initial phases of forestland, heterogenous grasses, bare ground and stones, the monitoring of such areas is difficult. For this reason, the aim of this paper is to assess semi-automatic classifications of the shrubby formations based on multispectral Sentinel-2 and visible and near infrared (VINR) AISA-EAGLE II hyperspectral airborne images with a support of Canopy High Model (CHM) as a three-dimensional information and field-verified patterns, based on Match-T/DSM and aerial photos. Support Vector Machine (SVM) and Random Forest (RF) classifiers have been tested on a few scenarios featuring different combinations of spectral and Minimum Noise Fraction (MNF) transformed bands and vegetation indices. Referring to the results, the average overall accuracy for the SVM and AISA images (all tested data sets) was 78.23%, and for the RF: 79.85%. In the case of Sentinel-2, the SVM classifier obtained an average value of 83.63%, while RF: 85.32%; however, in the case of the shrubland, we would like to recommend the RF classifier, because the highest mean value of F1-score achieved was 91.86% (SVM offered few-percent-point worse results), and the required training time was quicker than SVM. Commonly available Sentinel-2 data offered higher accuracies for shrubland monitoring than did the airborne VNIR data.


  • Open Access

    Airborne HySpex Hyperspectral Versus Multitemporal Sentinel-2 Images for Mountain Plant Communities Mapping

    by Marcin Kluczek, Bogdan Zagajewski, Marlena Kycko

    Climate change and anthropopression significantly impact plant communities by leading to the spread of expansive and alien invasive plants, thus reducing their biodiversity. Due to significant elevation gradients, high-mountain plant communities in a small area allow for the monitoring of the most important environmental changes. Additionally, being a tourist attraction, they are exposed to direct human influence (e.g., trampling). Airborne hyperspectral remote sensing is one of the best data sources for vegetation mapping, but flight campaign costs limit the repeatability of surveys. A possible alternative approach is to use satellite data from the Copernicus Earth observation program. In our study, we compared multitemporal Sentinel-2 data with HySpex airborne hyperspectral images to map the plant communities on Tatra Mountains based on open-source R programing implementation of Random Forest and Support Vector Machine classifiers. As high-mountain ecosystems are adapted to topographic conditions, the input of Digital Elevation Model (DEM) derivatives on the classification accuracy was analyzed and the effect of the number of training pixels was tested to procure practical information for field campaign planning. For 13 classes (from rock scree communities and alpine grasslands to montane conifer and deciduous forests), we achieved results in the range of 76–90% F1-score depending on the data set. Topographic features: digital terrain model (DTM), normalized digital surface model (nDSM), and aspect and slope maps improved the accuracy of HySpex spectral images, transforming their minimum noise fraction (MNF) bands and Sentinel-2 data sets by 5–15% of the F1-score. Maps obtained on the basis of HySpex imagery (2 m; 430 bands) had a high similarity to maps obtained on the basis of multitemporal Sentinel-2 data (10 m; 132 bands; 11 acquisition dates), which was less than one percentage point for classifications based on 500–1000 pixels; for sets consisting of 50–100 pixels, Random Forest (RF) offered better accuracy.


  • Open Access

    Mapping Invasive Plant Species with Hyperspectral Data Based on Iterative Accuracy Assessment Techniques

    by Anita Sabat-Tomala, Edwin Raczko, Bogdan Zagajewski

    Recent developments in computer hardware made it possible to assess the viability of permutation-based approaches in image classification. Such approaches sample a reference dataset multiple times in order to train an arbitrary number of machine learning models while assessing their accuracy. So-called iterative accuracy assessment techniques or Monte-Carlo-based approaches can be a useful tool when it comes to assessment of algorithm/model performance but are lacking when it comes to actual image classification and map creation. Due to the multitude of models trained, one has to somehow reason which one of them, if any, should be used in the creation of a map. This poses an interesting challenge since there is a clear disconnect between algorithm assessment and the act of map creation. Our work shows one of the ways this disconnect can be bridged. We calculate how often a given pixel was classified as given class in all variations of a multitude of post-classification images delivered by models trained during the iterative assessment procedure. As a classification problem, a mapping of Calamagrostis epigejos, Rubus spp., Solidago spp. invasive plant species using three HySpex hyperspectral datasets collected in June, August and September was used. As a classification algorithm, the support vector machine approach was chosen, with training hyperparameters obtained using a grid search approach. The resulting maps obtained F1-scores ranging from 0.87 to 0.89 for Calamagrostis epigejos, 0.89 to 0.97 for Rubus spp. and 0.99 for Solidago spp.


  • Open Access

    Assessment of Sentinel-2 Images, Support Vector Machines and Change Detection Algorithms for Bark Beetle Outbreaks Mapping in the Tatra Mountains

    by Robert Migas-Mazur, Marlena Kycko, Tomasz Zwijacz-Kozica, Bogdan Zagajewski

    Cambiophagous insects, fires and windthrow cause significant forest disturbances, generating ecological changes and economical losses. The bark beetle (Ips typographus L.), inhabiting coniferous forests and eliminating weakened trees, plays a key role in posing a threat to tree stands, which are dominated by Norway spruce (Picea abies) and covers a large part of mountain areas, as well as the lowlands of Northern, Central and Eastern Europe. Due to the dynamics of the phenomena taking place, the EU recommends constant monitoring of forests in terms of large-area disturbances and factors affecting tree stands’ susceptibility to destruction. The right tools for this are multispectral satellite images, which regularly and free of charge provide up-to-date information on changes in the environment. The aim of this study was to develop a method of identifying disturbances of spruce stands, including the identification of bark beetle outbreaks. Sentinel 2 images from 2015–2018 were used for this purpose; the reference data were high-resolution aerial images, satellite WorldView 2, as well as field verification data. Support Vector Machines (SVM) distinguished six classes: deciduous forests, coniferous forests, grasslands, rocks, snags (dieback of standing trees) and cuts/windthrow. Remote sensing vegetation indices, Multivariate Alteration Detection (MAD), Multivariate Alteration Detection/Maximum Autocorrelation Factor (MAD/MAF), iteratively re-weighted Multivariate Alteration Detection (iMAD) and trained SVM signatures from another year, stacked band rasters allowed us to identify: (1) no changes; (2) dieback of standing trees; (3) logging or falling down of trees. The overall accuracy of the SVM classification oscillated between 97–99%; it was observed that in 2015–2018, as a result of the windthrow and bark beetle outbreaks and the consequences of those natural disturbances (e.g., sanitary cuts), approximately 62.5 km2 of coniferous stands (29%) died in the studied area of the Tatra Mountains.


  • Open Access

    Comparison of Random Forest, Support Vector Machines, and Neural Networks for Post-Disaster Forest Species Mapping of the Krkonoše/Karkonosze Transboundary Biosphere Reserve

    by Bogdan Zagajewski, Marcin Kluczek, Edwin Raczko, Ajda Njegovec, Anca Dabija, Marlena Kycko

    Mountain forests are exposed to extreme conditions (e.g., strong winds and intense solar radiation) and various types of damage by insects such as bark beetles, which makes them very sensitive to climatic changes. Therefore, continuous monitoring is crucial, and remote-sensing techniques allow the monitoring of transboundary areas where a common policy is needed to protect and monitor the environment. In this study, we used Sentinel-2 and Landsat 8 open data to assess the forest stands classification of the UNESCO Krkonoše/Karkonosze Transboundary Biosphere Reserve, which is undergoing dynamic changes in recovering woodland vegetation due to an ecological disaster that led to damage and death of a large portion of the forests. Currently, in this protected area, dry big trunks and branches coexist with naturally occurring young forests. This heterogeneity generates mixes, which hinders the automation of classification. Thus, we used three machine learning algorithms—Random Forest (RF), Support Vector Machine (SVM), and Artificial Neural Network (ANN)—to classify dominant tree species (birch, beech, larch and spruce). The best results were obtained for the SVM RBF classifier, which offered an average median F1-score that oscillated around 67.2–91.5% depending on the species. The obtained maps, which were based on multispectral satellite images, were also compared with classifications made for the same area on the basis of hyperspectral APEX imagery (288 spectral bands with three-meter resolution), indicating high convergence in the recognition of woody species.