TWThomas R. Ward

Thomas R. Ward

*This is an algorithmically generated author record based on publicly available information.

Current Organizations / Institutes

The organizations/institutes from the scholar's latest article


Thomas R. Ward has a total of 582 co-authors. Here are the top co-authors by number of shared publications:

  • Tillmann Heinisch

    Department of Chemistry, University of Basel, Mattenstrasse 24a, 4058 Basel, Switzerland

    21 shared publications
  • Valentin Köhler

    University of Basel, Department of Chemistry, St. Johanns-Ring 19, CH-4056, Basel, Switzerland

    18 shared publications
  • Valentin Köhler

    Department of Chemistry, University of Basel, Mattenstrasse 24a, BPR 1096, Basel CH-4058, Switzerland

    14 shared publications
  • Raphael Reuter

    Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland

    13 shared publications
  • Ryo Tachibana

    Department of Chemistry University of Basel Mattenstrasse 22 4002 Basel Switzerland

    13 shared publications
  • Nicolas Humbert

    Institute of Chemistry, University of Neuchâtel, Av. Bellevaux 51, CP 158, 2009 Neuchâtel, Switzerland, Fax: (+41)-32-718-2511

    12 shared publications

Latest Publications

  • Catalytic Uncaging of Anticancer Drugs via a Buchner Ring Expansion

    by Damian Alexander Graf, Nicole Rathfelder, Boris Lozhkin, Thomas R. Ward

    Selective drug activation in living systems remains a central challenge in targeted cancer therapy. Bioorthogonal catalysis addresses this by using abiotic transition-metal catalysts to unmask prodrugs at the tumor site, but the repertoire of suitable reactions remains limited. Here, we exploit the Buchner ring-expansion as a new uncaging strategy, in which a metal-carbene catalyzes a regioselective intramolecular ring-expansion followed by spontaneous 1,6-elimination to release a caged payload─a cascade with no biological equivalent. The iridium porphyrin complex [Ir(mPIX)Me] catalyzes this reaction at nanomolar concentrations, and the platform can accommodate structurally diverse payloads. As a proof of concept, functionalization with a bivalent human carbonic anhydrase IX (hCA IX) inhibitor enabled tumor-selective release of epirubicin (Epi) in a cancer cell model. This work thus delineates a new reaction class to the growing toolkit of transition-metal-mediated bioorthogonal chemistry.

  • Open Access

    Ultrahigh-Throughput Evolution of a Photoenzyme for Efficient Bioproduction of Toluene and p-Cresol

    by Shuke Wu, Zhaoyang Qin, Yi Zhou, Shenghao Peng, Wen Zheng, Zherui Xu, Yunpeng Bai, Matthias Höhne, Thomas Ward, Uwe Bornscheuer

    Photoenzymes have emerged as powerful biocatalysts for light-driven transformations, yet their engineering has been constrained by low-to-medium-throughput screening methods, and their catalytic efficiency for non-native reactions/substrates typically remains moderate. Here, we report the first ultrahigh-throughput screening (uHTS) platform for the directed evolution of a photoenzyme, achieved by engineering transcription factor-based biosensors coupled with fluorescence-activated cell sorting. Using the fatty acid photodecarboxylase CvFAP as a model, we performed three iterative rounds of uHTS combining multi-site saturation and random mutagenesis, and successfully obtained evolved variants (M9T and M9P) that exhibited >200-fold improvements in productivity towards two non-native aromatic substrates, with turnover numbers reaching up to 3,700. Molecular dynamics simulations revealed that the accumulated mutations synergistically optimized substrate access, pocket hydrophobicity, and catalytic distances. When integrated into enzyme cascades from ʟ-phenylalanine and ʟ-tyrosine, these CvFAP variants enabled photobiocatalytic production of toluene (67.9 mM) and p cresol (198 mM). Furthermore, by coupling with high cell density fermentation, we achieved direct conversion of glucose derived crude amino acids to 4.3 g l-1 toluene and 21.4 g l-1 p-cresol without intermediate purification. Collectively, this work establishes uHTS as a powerful platform for reprogramming photoenzymes towards non native substrates, and provides a sustainable route from renewable biomass to industrially important aromatic chemicals.

  • Open Access

    A Ruthenium(CAAC‐5) Olefin Metathesis Catalyst for Bioconjugation

    by Damian Alexander Graf, Mikhail Boym, María Álvarez, Tsvetan Kardashliev, Thomas R. Ward

    Olefin metathesis is a powerful transformation for carbon–carbon bond formation, yet its application in biological settings is challenged by the instability of most ruthenium catalysts in aqueous media. Herein, we report a Ru(CAAC‐5) olefin metathesis catalyst bearing a functional handle for bioconjugation. The resulting hybrid catalyst catalyzes ring‐closing metathesis (RCM) and displays extended lifetimes in aqueous media. Functionalized CAAC‐5 ligands bearing a protected aniline linker were prepared via enamine alkylation and coordinated to ruthenium to afford the corresponding Ru(CAAC‐5) complex. In a benchmark RCM reaction under biologically relevant conditions, the ruthenium complex exhibits enhanced catalytic robustness and reaches turnover numbers of up to 600. Deprotection of an amine‐functionalized handle enables the bioconjugation to proteins and peptides. Using this platform, the catalyst was anchored to biomolecules through supramolecular anchoring to human carbonic anhydrase II (hCA II), click conjugation to peptides (SS01), and covalent attachment to ubiquitin (Ubi). To the best of our knowledge, this aniline‐functionalized Ru(CAAC‐5) complex is the first CAAC‐bearing metathesis catalyst amenable to bioconjugation, while retaining the prolonged catalytic activity characteristic of CAAC‐based systems in aqueous media.

  • Open Access

    Ein Ruthenium(CAAC‐5)‐Olefin‐Metathese‐Katalysator für die Biokonjugation

    by Damian Alexander Graf, Mikhail Boym, María Álvarez, Tsvetan Kardashliev, Thomas R. Ward

    ZUSAMMENFASSUNG: Die Olefinmetathese ist ein leistungsstarker Umwandlungsprozess zur Bildung von Kohlenstoff‐Kohlenstoff‐Bindungen, doch ihre Anwendung in biologischen Systemen wird durch die Instabilität der meisten Rutheniumkatalysatoren in wässrigen Medien erschwert. Hier berichten wir über einen Ru(CAAC‐5)‐Olefinmetathese‐Katalysator, der eine funktionelle Gruppe für die Biokonjugation aufweist. Der resultierende Hybridkatalysator katalysiert die ringschließende Metathese (RCM) und weist in wässrigen Medien eine verlängerte Lebensdauer auf. Funktionalisierte CAAC‐5‐Liganden mit einem geschützten Anilin‐Linker wurden durch Enamin‐Alkylierung hergestellt und an Ruthenium koordiniert, um den entsprechenden Ru(CAAC‐5)‐Komplex zu erhalten. In einer Benchmark‐RCM‐Reaktion unter biologisch relevanten Bedingungen zeigt der Rutheniumkomplex eine verbesserte katalytische Robustheit und erreicht eine Umsatzzahl von bis zu 600. Die Entschützung einer Anilin‐Gruppe ermöglicht die Biokonjugation an Proteine und Peptide. Mithilfe dieser Plattform wurde der Katalysator durch supramolekulare Verankerung an Carboanhydrase II (hCA II), Click‐Konjugation an Peptide (SS01) und kovalente Bindung an Ubiquitin (Ubi) an Biomoleküle gebunden. Nach unserem Kenntnisstand ist dieser anilinfunktionalisierte Ru(CAAC‐5)‐Komplex der erste CAAC‐haltige Metathese‐Katalysator, der sich für die Biokonjugation eignet und dabei die für CAAC‐Systeme charakteristische katalytische Aktivität in wässrigen Medien beibehält.

  • Design, Optimization and Characterization of a de novo Gold Hydroaminase

    by Elinor Morris, Boris Lozhkin, Jan Uhrhan, Indrek Kalvet, Sophie Basler, Roman P. Jakob, David Baker, Thomas R. Ward


  • Open Access

    Biocatalytic asymmetric radical alkene hydration

    by Thomas Ward, Dongping Chen, Xiang Zhang

    Asymmetric alkene hydration provides direct access to enantiopure alcohols and has been extensively developed through ionic mechanisms. Radical pathways remain largely unexplored, despite their potential for late-stage functionalization and functional-group tolerance. In this context, the Drago-Mukaiyama hydration—which proceeds via a metal–hydride hydrogen atom transfer (MHAT) mechanism—has found numerous applications in total synthesis, yet achieving high stereocontrol remains challenging. Here we show that cytochrome P450BM3 can be repurposed as a radical hydratase that catalyzes the asymmetric radical hydration of both terminal and internal alkenes under aerobic conditions, affording a range of enantioenriched alcohols with up to 99% enantiomeric excess. Mechanistic investigations reveal a pathway initiated by metal–hydride hydrogen atom transfer (MHAT) and asymmetric intermolecular radical addition of dioxygen. A subsequent kinetic resolution of the hydroperoxide intermediate further upgrades the enantioselectivity of the alcohol product. This study highlights that radical alkene hydration can be catalyzed by haemoproteins, thus expanding the scope of challenging asymmetric reactions accessible to haemoproteins.

  • Construction of dual-cofactor artificial metalloenzymes for synergistic and enantiodivergent catalysis of Michael addition reactions

    by Weijin Wang, Xinjian Ji, Pol Gorrea-Acín, Kelvin Lau, Florence Pojer, Thomas R. Ward, Xile Hu


  • Open Access

    Design, Optimization and Characterization of a de novo Gold Hydroaminase

    by Elinor Morris, Boris Lozhkin, Jan Uhrhan, Indrek Kalvet, Sophie Basler, Roman P. Jakob, David Baker, Thomas Ward

    Artificial metalloenzymes (ArMs) offer a versatile and evolvable platform to extend the biocatalytic repertoire. Here we report the assembly of an ArM resulting from supramolecular anchoring an N-heterocyclic carbene Au(I) complex into a de novo designed tandem repeat protein (TRP). We identified a variant that, compared to the free cofactor, led to a higher catalytic activity for the Au-catalyzed hydroamination of 2-ethynylaniline. Structure-guided mutagenesis of this variant improved the activity, resulting in a double mutant displaying up to fourfold higher catalytic rates than the original TRP. Biophysical and crystallographic analysis revealed distinct cofactor binding poses, with single mutations reshaping the active site and correlating with improved catalytic performance. Importantly, the TRP scaffold imparted robustness, preserving catalytic activity under acidic conditions, in the presence of organic cosolvent, and at elevated temperatures, where the free cofactor was deactivated. This work highlights the potential of de novo designed proteins to harbor non-natural metal cofactors and points to design principles for stabilizing sensitive catalysts under chaotropic conditions.