Josephine Y. Aller
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
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Research Interests
Josephine Y. Aller has a total of 138 co-authors. Here are the top co-authors by number of shared publications:
Robert C. Aller
15 shared publications- Paul F. Kemp
Brookhaven National Laboratory
7 shared publications - Peter Aaron Alpert
Laboratory of Atmospheric Chemistry, PSI Center for Energy and Environmental Sciences, Paul Scherrer Institute, Villigen, 5234, Switzerland
6 shared publications - Daniel Alexander Knopf
School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
5 shared publications Wendy P. Kilthau
School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY 11794, USA
4 shared publications- Harbans S. Dhadwal
Stony Brook University
3 shared publications
Latest Publications
- Open Access
- 4 November 2022
- Published by American Association for the Advancement of Science (AAAS) in Science Advances
- Vol. 8 (44) , eabq6842
Ice-nucleating agents in sea spray aerosol identified and quantified with a holistic multimodal freezing model
Sea spray aerosol (SSA) is a widely recognized important source of ice-nucleating particles (INPs) in the atmosphere. However, composition-specific identification, nucleation processes, and ice nucleation rates of SSA-INPs have not been well constrained. Microspectroscopic characterization of ambient and laboratory-generated SSA confirms that water-borne exudates from planktonic microorganisms composed of a mixture of proteinaceous and polysaccharidic compounds act as ice-nucleating agents (INAs). These data and data from previously published mesocosm and wave channel studies are subsequently used to further develop the stochastic freezing model (SFM) producing ice nucleation rate coefficients for SSA-INPs. The SFM simultaneously predicts immersion freezing and deposition and homogeneous ice nucleation by SSA particles under tropospheric conditions. Predicted INP concentrations agree with ambient and laboratory measurements. In addition, this holistic freezing model is independent of the source and exact composition of the SSA particles, making it well suited for implementation in cloud and climate models.
- 4 November 2022
- Published by American Association for the Advancement of Science (AAAS) in Science Advances
- Vol. 8 (44) , eabq6842
Open AccessIce-nucleating agents in sea spray aerosol identified and quantified with a holistic multimodal freezing model
Sea spray aerosol (SSA) is a widely recognized important source of ice-nucleating particles (INPs) in the atmosphere. However, composition-specific identification, nucleation processes, and ice nucleation rates of SSA-INPs have not been well constrained. Microspectroscopic characterization of ambient and laboratory-generated SSA confirms that water-borne exudates from planktonic microorganisms composed of a mixture of proteinaceous and polysaccharidic compounds act as ice-nucleating agents (INAs). These data and data from previously published mesocosm and wave channel studies are subsequently used to further develop the stochastic freezing model (SFM) producing ice nucleation rate coefficients for SSA-INPs. The SFM simultaneously predicts immersion freezing and deposition and homogeneous ice nucleation by SSA particles under tropospheric conditions. Predicted INP concentrations agree with ambient and laboratory measurements. In addition, this holistic freezing model is independent of the source and exact composition of the SSA particles, making it well suited for implementation in cloud and climate models.
- Open Access
- 28 February 2022
- Published by MDPI AG in Sustainability
- Vol. 14 (5) , 2829
The Codevelopment of Mangroves and Infaunal Community Diversity in Response to the Natural Dynamics of Mud Deposition in French Guiana
The sustainability of mangrove ecosystems requires a knowledge of their spatiotemporal variability as a function of regional properties. The unique coastal ecosystems of the mangrove belt along the coast of the Guianas in South America are influenced by cycles of a massive accretion of mud supplied by the Amazon River and wave induced erosion. This study characterized, for the first time, how benthic infaunal assemblages, as proxies of mechanisms of mangrove resilience, were structured by the natural growth track of Avicennia germinans dominated mangroves in French Guiana. We sampled 4 mobile mud stations and 27 consolidated mud stations distributed over 9 tidal transects from bare to vegetated mudflats colonized by young mangroves during the dry season. We collected a complete dataset of sediment and vegetation variables together with the benthic meso- (>0.25 mm) and macrofauna (>1 mm). We used a combination of eigenvector based multivariate analyses and variance partitioning on this multiple set of variables to identify which environmental variables likely drive the benthic diversity patterns. Mangrove early development increased the alpha and beta diversities of the infaunal communities for the two size classes. A total of 20–30% and 7–12% of the beta diversity are explained by linear and nonlinear spatial variables, respectively. However, 7% to 9% of the variance partioning could be determined by other biotic/abiotic variables, biological interactions or neutral processes, not described here. This study has highlighted the necessity of taking into account mangrove dynamics at suitable spatial scales for benthic biodiversity evaluation and mangrove management or restoration plans.
- 28 February 2022
- Published by MDPI AG in Sustainability
- Vol. 14 (5) , 2829
Open AccessThe Codevelopment of Mangroves and Infaunal Community Diversity in Response to the Natural Dynamics of Mud Deposition in French Guiana
The sustainability of mangrove ecosystems requires a knowledge of their spatiotemporal variability as a function of regional properties. The unique coastal ecosystems of the mangrove belt along the coast of the Guianas in South America are influenced by cycles of a massive accretion of mud supplied by the Amazon River and wave induced erosion. This study characterized, for the first time, how benthic infaunal assemblages, as proxies of mechanisms of mangrove resilience, were structured by the natural growth track of Avicennia germinans dominated mangroves in French Guiana. We sampled 4 mobile mud stations and 27 consolidated mud stations distributed over 9 tidal transects from bare to vegetated mudflats colonized by young mangroves during the dry season. We collected a complete dataset of sediment and vegetation variables together with the benthic meso- (>0.25 mm) and macrofauna (>1 mm). We used a combination of eigenvector based multivariate analyses and variance partitioning on this multiple set of variables to identify which environmental variables likely drive the benthic diversity patterns. Mangrove early development increased the alpha and beta diversities of the infaunal communities for the two size classes. A total of 20–30% and 7–12% of the beta diversity are explained by linear and nonlinear spatial variables, respectively. However, 7% to 9% of the variance partioning could be determined by other biotic/abiotic variables, biological interactions or neutral processes, not described here. This study has highlighted the necessity of taking into account mangrove dynamics at suitable spatial scales for benthic biodiversity evaluation and mangrove management or restoration plans.
- Open Access
- 5 July 2019
- Published by American Association for the Advancement of Science (AAAS) in Science Advances
- Vol. 5 (7) , eaaw3651
Worm tubes as conduits for the electrogenic microbial grid in marine sediments
Electrogenic cable bacteria can couple spatially separated redox reaction zones in marine sediments using multicellular filaments as electron conductors. Reported as generally absent from disturbed sediments, we have found subsurface cable aggregations associated with tubes of the parchment worm Chaetopterus variopedatus in otherwise intensely bioturbated deposits. Cable bacteria tap into tubes, which act as oxygenated conduits, creating a three-dimensional conducting network extending decimeters into sulfidic deposits. By elevating pH, promoting Mn, Fe-oxide precipitation in tube linings, and depleting S around tubes, they enhance tube preservation and favorable biogeochemical conditions within the tube. The presence of disseminated filaments a few cells in length away from oxygenated interfaces and the reported ability of cable bacteria to use a range of redox reaction couples suggest that these microbes are ubiquitous facultative opportunists and that long filaments are an end-member morphological adaptation to relatively stable redox domains.
- 5 July 2019
- Published by American Association for the Advancement of Science (AAAS) in Science Advances
- Vol. 5 (7) , eaaw3651
Open AccessWorm tubes as conduits for the electrogenic microbial grid in marine sediments
Electrogenic cable bacteria can couple spatially separated redox reaction zones in marine sediments using multicellular filaments as electron conductors. Reported as generally absent from disturbed sediments, we have found subsurface cable aggregations associated with tubes of the parchment worm Chaetopterus variopedatus in otherwise intensely bioturbated deposits. Cable bacteria tap into tubes, which act as oxygenated conduits, creating a three-dimensional conducting network extending decimeters into sulfidic deposits. By elevating pH, promoting Mn, Fe-oxide precipitation in tube linings, and depleting S around tubes, they enhance tube preservation and favorable biogeochemical conditions within the tube. The presence of disseminated filaments a few cells in length away from oxygenated interfaces and the reported ability of cable bacteria to use a range of redox reaction couples suggest that these microbes are ubiquitous facultative opportunists and that long filaments are an end-member morphological adaptation to relatively stable redox domains.
- 1 April 2017
- Published by Elsevier in Atmospheric Environment
- Vol. 154, 331-347
Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol
- 1 April 2017
- Published by Elsevier in Atmospheric Environment
- Vol. 154, 331-347
Size-resolved characterization of the polysaccharidic and proteinaceous components of sea spray aerosol
- 1 May 2016
- Published by Elsevier in Atmospheric Environment
- Vol. 132, 1-10
Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements
- 1 May 2016
- Published by Elsevier in Atmospheric Environment
- Vol. 132, 1-10
Addressing the ice nucleating abilities of marine aerosol: A combination of deposition mode laboratory and field measurements
- Top Cited Papers
- 9 September 2015
- Published by Springer Nature in Nature
- Vol. 525 (7568) , 234-238
A marine biogenic source of atmospheric ice-nucleating particles
The amount of ice present in clouds can affect cloud lifetime, precipitation and radiative properties. The formation of ice in clouds is facilitated by the presence of airborne ice-nucleating particles. Sea spray is one of the major global sources of atmospheric particles, but it is unclear to what extent these particles are capable of nucleating ice. Sea-spray aerosol contains large amounts of organic material that is ejected into the atmosphere during bubble bursting at the organically enriched sea-air interface or sea surface microlayer. Here we show that organic material in the sea surface microlayer nucleates ice under conditions relevant for mixed-phase cloud and high-altitude ice cloud formation. The ice-nucleating material is probably biogenic and less than approximately 0.2 micrometres in size. We find that exudates separated from cells of the marine diatom Thalassiosira pseudonana nucleate ice, and propose that organic material associated with phytoplankton cell exudates is a likely candidate for the observed ice-nucleating ability of the microlayer samples. Global model simulations of marine organic aerosol, in combination with our measurements, suggest that marine organic material may be an important source of ice-nucleating particles in remote marine environments such as the Southern Ocean, North Pacific Ocean and North Atlantic Ocean.
- 9 September 2015
- Published by Springer Nature in Nature
- Vol. 525 (7568) , 234-238
Top Cited PapersA marine biogenic source of atmospheric ice-nucleating particles
The amount of ice present in clouds can affect cloud lifetime, precipitation and radiative properties. The formation of ice in clouds is facilitated by the presence of airborne ice-nucleating particles. Sea spray is one of the major global sources of atmospheric particles, but it is unclear to what extent these particles are capable of nucleating ice. Sea-spray aerosol contains large amounts of organic material that is ejected into the atmosphere during bubble bursting at the organically enriched sea-air interface or sea surface microlayer. Here we show that organic material in the sea surface microlayer nucleates ice under conditions relevant for mixed-phase cloud and high-altitude ice cloud formation. The ice-nucleating material is probably biogenic and less than approximately 0.2 micrometres in size. We find that exudates separated from cells of the marine diatom Thalassiosira pseudonana nucleate ice, and propose that organic material associated with phytoplankton cell exudates is a likely candidate for the observed ice-nucleating ability of the microlayer samples. Global model simulations of marine organic aerosol, in combination with our measurements, suggest that marine organic material may be an important source of ice-nucleating particles in remote marine environments such as the Southern Ocean, North Pacific Ocean and North Atlantic Ocean.
- Open Access
- 2 August 2015
- Published by American Geophysical Union (AGU) in Journal of Geophysical Research: Atmospheres
- Vol. 120 (17) , 8841-8860
The influence of marine microbial activities on aerosol production: A laboratory mesocosm study
The oceans cover most of the Earth's surface, contain nearly half the total global primary biomass productivity, and are a major source of atmospheric aerosol particles. Here we experimentally investigate links between biological activity in seawater and sea spray aerosol (SSA) flux, a relationship of potential significance for organic aerosol loading and cloud formation over the oceans and thus for climate globally. Bubbles were generated in laboratory mesocosm experiments either by recirculating impinging water jets or glass frits. Experiments were conducted with Atlantic Ocean seawater collected off the eastern end of Long Island, NY, and with artificial seawater containing cultures of bacteria and phytoplankton Thalassiosira pseudonana, Emiliania huxleyi, and Nannochloris atomus. Changes in SSA size distributions occurred during all phases of bacterial and phytoplankton growth, as characterized by cell concentrations, dissolved organic carbon, total particulate carbon, and transparent exopolymer particles (gel‐forming polysaccharides representing a major component of biogenic exudate material). Over a 2 week growth period, SSA particle concentrations increased by a factor of less than 2 when only bacteria were present and by a factor of about 3 when bacteria and phytoplankton were present. Production of jet‐generated SSA particles of diameter less than 200 nm increased with time, while production of all particle diameters increased with time when frits were used. The implications of a marine biological activity dependent SSA flux are discussed.
- 2 August 2015
- Published by American Geophysical Union (AGU) in Journal of Geophysical Research: Atmospheres
- Vol. 120 (17) , 8841-8860
Open AccessThe influence of marine microbial activities on aerosol production: A laboratory mesocosm study
The oceans cover most of the Earth's surface, contain nearly half the total global primary biomass productivity, and are a major source of atmospheric aerosol particles. Here we experimentally investigate links between biological activity in seawater and sea spray aerosol (SSA) flux, a relationship of potential significance for organic aerosol loading and cloud formation over the oceans and thus for climate globally. Bubbles were generated in laboratory mesocosm experiments either by recirculating impinging water jets or glass frits. Experiments were conducted with Atlantic Ocean seawater collected off the eastern end of Long Island, NY, and with artificial seawater containing cultures of bacteria and phytoplankton Thalassiosira pseudonana, Emiliania huxleyi, and Nannochloris atomus. Changes in SSA size distributions occurred during all phases of bacterial and phytoplankton growth, as characterized by cell concentrations, dissolved organic carbon, total particulate carbon, and transparent exopolymer particles (gel‐forming polysaccharides representing a major component of biogenic exudate material). Over a 2 week growth period, SSA particle concentrations increased by a factor of less than 2 when only bacteria were present and by a factor of about 3 when bacteria and phytoplankton were present. Production of jet‐generated SSA particles of diameter less than 200 nm increased with time, while production of all particle diameters increased with time when frits were used. The implications of a marine biological activity dependent SSA flux are discussed.
- 1 November 2013
- Published by Journal of Marine Research/Yale in Journal of Marine Research
- Vol. 71 (6) , 399-423
Seasonal, 2-D sedimentary extracellular enzyme activities and controlling processes in Great Peconic Bay, Long Island
- 1 November 2013
- Published by Journal of Marine Research/Yale in Journal of Marine Research
- Vol. 71 (6) , 399-423
Seasonal, 2-D sedimentary extracellular enzyme activities and controlling processes in Great Peconic Bay, Long Island
- 12 September 2011
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 13 (44) , 19882-19894
Initiation of the ice phase by marine biogenic surfaces in supersaturated gas and supercooled aqueous phases
Biogenic particles have the potential to affect the formation of ice crystals in the atmosphere with subsequent consequences for the hydrological cycle and climate. We present laboratory observations of heterogeneous ice nucleation in immersion and deposition modes under atmospherically relevant conditions initiated by Nannochloris atomus and Emiliania huxleyi, marine phytoplankton with structurally and chemically distinct cell walls. Temperatures at which freezing, melting, and water uptake occur are observed using optical microscopy. The intact and fragmented unarmoured cells of N. atomus in aqueous NaCl droplets enhance ice nucleation by 10–20 K over the homogeneous freezing limit and can be described by a modified water activity based ice nucleation approach. E. huxleyicells covered by calcite plates do not enhance droplet freezing temperatures. Both species nucleate ice in the deposition mode at an ice saturation ratio, Sice, as low as ∼1.2 and below 240 K, however, for each, different nucleation modes occur at warmer temperatures. These observations show that markedly different biogenic surfaces have both comparable and contrasting effects on ice nucleation behaviour depending on the presence of the aqueous phase and the extent of supercooling and water vapour supersaturation. We derive heterogeneous ice nucleation rate coefficients, Jhet, and cumulative ice nuclei spectra, K, for quantification and analysis using time-dependent and time-independent approaches, respectively. Contact angles, α, derived from Jhetvia immersion freezing depend on T, aw, and Sice. For deposition freezing, α can be described as a function of Sice only. The different approaches yield different predictions of atmospheric ice crystal numbers primarily due to the time evolution allowed for the time-dependent approach with implications for the evolution of mixed-phase and ice clouds.
- 12 September 2011
- Published by Royal Society of Chemistry (RSC) in Physical Chemistry Chemical Physics
- Vol. 13 (44) , 19882-19894
Initiation of the ice phase by marine biogenic surfaces in supersaturated gas and supercooled aqueous phases
Biogenic particles have the potential to affect the formation of ice crystals in the atmosphere with subsequent consequences for the hydrological cycle and climate. We present laboratory observations of heterogeneous ice nucleation in immersion and deposition modes under atmospherically relevant conditions initiated by Nannochloris atomus and Emiliania huxleyi, marine phytoplankton with structurally and chemically distinct cell walls. Temperatures at which freezing, melting, and water uptake occur are observed using optical microscopy. The intact and fragmented unarmoured cells of N. atomus in aqueous NaCl droplets enhance ice nucleation by 10–20 K over the homogeneous freezing limit and can be described by a modified water activity based ice nucleation approach. E. huxleyicells covered by calcite plates do not enhance droplet freezing temperatures. Both species nucleate ice in the deposition mode at an ice saturation ratio, Sice, as low as ∼1.2 and below 240 K, however, for each, different nucleation modes occur at warmer temperatures. These observations show that markedly different biogenic surfaces have both comparable and contrasting effects on ice nucleation behaviour depending on the presence of the aqueous phase and the extent of supercooling and water vapour supersaturation. We derive heterogeneous ice nucleation rate coefficients, Jhet, and cumulative ice nuclei spectra, K, for quantification and analysis using time-dependent and time-independent approaches, respectively. Contact angles, α, derived from Jhetvia immersion freezing depend on T, aw, and Sice. For deposition freezing, α can be described as a function of Sice only. The different approaches yield different predictions of atmospheric ice crystal numbers primarily due to the time evolution allowed for the time-dependent approach with implications for the evolution of mixed-phase and ice clouds.