Géraldine Sarthou

Combined observations of phytoplankton abundance, community structure, and trace metals in winter are scarce but crucial for understanding Southern Ocean biogeochemistry. This study provides the first early winter insights of phytoplankton‐micronutrient dynamics in the Indian sector of the Southern Ocean. Depth‐resolved measurements of chlorophyll‐ a , phytoplankton composition, and micronutrients iron (Fe), manganese (Mn), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), and cadmium (Cd) reveal low phytoplankton abundance (0.27–0.08 μg L ⁻¹ chlorophyll‐ a ) and variable phytoplankton–micronutrient dynamics between the zones. In the Subtropical Zone, cyanobacteria, and haptophytes dominated, driven by higher temperatures, limiting macronutrients, Fe and Zn, and shaped Co and Mn through biological uptake. In the Subantarctic and Polar Frontal Zones, cyanobacteria contributions declined but continued to play a key role in shaping Co dynamics. Diatoms were limited by Mn, Zn, and silicic acid, enabling the dominance of prasinophytes. Other groups such as coccolithophores may have benefitted from the ability to substitute Zn for Cd and contributed to the formation of particulate Cd. Coccolithophores along with Phaeocystis also contributed to particulate Cd in the Antarctic Zone, where Fe and Mn limited the abundance of the dominating diatoms. Diatoms, in turn, strongly contributed to particulate Zn. This perspective on phytoplankton‐micronutrient relationships shows that despite their low productivity in the harsh low light wintertime Southern Ocean, phytoplankton continue to influence trace metal distribution and that there are strong phytoplankton group‐specific associations with various essential metals, rather than Fe alone, that vary latitudinally.

The high diversity and global distribution of heterotrophic bacterial diazotrophs (HBDs) in the ocean has recently become apparent. However, understanding the role these largely uncultured microorganisms play in marine N ₂ fixation poses a challenge due to their undefined growth requirements and the complex regulation of the nitrogenase enzyme. We isolated and characterized Candidatus Thalassolituus haligoni, a member of a widely distributed clade of HBD belonging to the Oceanospirillales. Analysis of its nifH gene via amplicon sequencing revealed the extensive distribution of Cand. T. haligoni across the Pacific, Atlantic, and Arctic Oceans. Pangenome analysis indicates that the isolate shares >99% identity with an uncultured metagenome-assembled genome called Arc-Gamma-03, recently recovered from the Arctic Ocean. Through combined genomic, proteomic, and physiological approaches, we confirmed that the isolate fixes N ₂ gas. However, the mechanisms governing nitrogenase regulation in Cand. T. haligoni remain unclear. We propose Cand. T. haligoni as a globally distributed, cultured HBD model species within this understudied clade of Oceanospirillales.

Iron is an essential nutrient that regulates productivity in ~30% of the ocean. Compared with deep (>2000 meter) hydrothermal activity at mid-ocean ridges that provide iron to the ocean’s interior, shallow (2 .

Iron is a key micronutrient in seawater, but concentrations would be negligible without the presence of organic ligands. The processes influencing the ligand pool composition are poorly constrained, limiting our understanding of the controls on dissolved iron distributions. To address this, the release of iron and iron‐binding ligands during the microbial remineralization of sinking particles was investigated by deploying in situ particle interceptor/incubator devices at subsurface sites in the Mediterranean Sea and Subantarctic. Analyses revealed that the pool of released ligands was largely dominated by electroactive humic substances (74 ± 28%). The release of ligands during remineralization ensured that concurrently released iron remained in solution, which is crucial for iron regeneration. This study presents compelling evidence of the key role of humic ligands in the subsurface replenishment of dissolved iron and thus on the wider oceanic dissolved iron inventory, which ultimately controls the magnitude of iron resupplied to the euphotic zone.

Dissolved Fe (DFe) samples from the GEOVIDE voyage (GEOTRACES GA01, May–June 2014) in the North Atlantic Ocean were analyzed using a seaFAST-pico™ coupled to an Element XR sector field inductively coupled plasma mass spectrometer (SF-ICP-MS) and provided interesting insights into the Fe sources in this area. Overall, DFe concentrations ranged from 0.09±0.01 to 7.8±0.5 nmol L⁻¹. Elevated DFe concentrations were observed above the Iberian, Greenland, and Newfoundland margins likely due to riverine inputs from the Tagus River, meteoric water inputs, and sedimentary inputs. Deep winter convection occurring the previous winter provided iron-to-nitrate ratios sufficient to sustain phytoplankton growth and lead to relatively elevated DFe concentrations within subsurface waters of the Irminger Sea. Increasing DFe concentrations along the flow path of the Labrador Sea Water were attributed to sedimentary inputs from the Newfoundland Margin. Bottom waters from the Irminger Sea displayed high DFe concentrations likely due to the dissolution of Fe-rich particles in the Denmark Strait Overflow Water and the Polar Intermediate Water. Finally, the nepheloid layers located in the different basins and at the Iberian Margin were found to act as either a source or a sink of DFe depending on the nature of particles, with organic particles likely releasing DFe and Mn particle scavenging DFe.

Heme b is an iron-containing co-factor in hemoproteins. Heme b concentrations are low (0.7 μm) from the North Atlantic Ocean (GEOVIDE cruise – GEOTRACES section GA01), which spanned several biogeochemical regimes. We examined the relationship between heme b abundance and the microbial community composition, and its utility for mapping iron limited phytoplankton. Heme b concentrations ranged from 0.16 to 5.1 pmol L^-1 (median = 2.0 pmol L^-1, n = 62) in the surface mixed layer (SML) along the cruise track, driven mainly by variability in biomass. However, in the Irminger Basin, the lowest heme b levels (SML: median = 0.53 pmol L^-1, n = 12) were observed, whilst the biomass was highest (particulate organic carbon, median = 14.2 μmol L^-1, n = 25; chlorophyll a: median = 2.0 nmol L^-1, n = 23) pointing to regulatory mechanisms of the heme b pool for growth conservation. Dissolved iron (DFe) was not depleted (SML: median = 0.38 nmol L^-1, n = 11) in the Irminger Basin, but large diatoms (Rhizosolenia sp.) dominated. Hence, heme b depletion and regulation is likely to occur during bloom progression when phytoplankton class-dependent absolute iron requirements exceed the available ambient concentration of DFe. Furthermore, high heme b concentrations found in the Iceland Basin and Labrador Sea (median = 3.4 pmol L^-1, n = 20), despite having similar DFe concentrations to the Irminger Basin, were attributed to an earlier growth phase of the extant phytoplankton populations. Thus, heme b provides a snapshot of the cellular activity in situ and could both be used as indicator of iron limitation and contribute to understanding phytoplankton adaptation mechanisms to changing iron supplies.

The identification of the mechanisms by which marine dissolved organic matter (DOM) is produced and regenerated is critical to develop robust prediction of ocean carbon cycling. Polysaccharides represent one of the main constituents of marine DOM and their degradation is mainly attributed to polysaccharidases derived from bacteria. Here, we report that marine viruses can depolymerize the exopolysaccharides (EPS) excreted by their hosts using five bacteriophages that infect the notable EPS producer, Cobetia marina DSMZ 4741. Degradation monitorings as assessed by gel electrophoresis and size exclusion chromatography showed that four out of five phages carry structural enzymes that depolymerize purified solution of Cobetia marina EPS. The depolymerization patterns suggest that these putative polysaccharidases are constitutive, endo-acting and functionally diverse. Viral adsorption kinetics indicate that the presence of these enzymes provides a significant advantage for phages to adsorb onto their hosts upon intense EPS production conditions. The experimental demonstration that marine phages can display polysaccharidases active on bacterial EPS lead us to question whether viruses could also contribute to the degradation of marine DOM and modify its bioavailability. Considering the prominence of phages in the ocean, such studies may unveil an important microbial process that affects the marine carbon cycle.