András Szabó
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
András Szabó has a total of 50 co-authors. Here are the top co-authors by number of shared publications:
- Andras Czirok
Department of Biological Physics, Eötvös Loránd University, Pázmány P. stny. 1/A, H-1117 Budapest, Hungary
9 shared publications - Roberto Mayor
Department of Cell and Developmental Biology, University College London, London, UK
7 shared publications - Roeland M. H. Merks
Leiden University, Origins Center, Netherlands
7 shared publications - Brenda J. Rongish
Department of Anatomy and Cell Biology, University of Kansas Medical Center, Kansas City, KS 66160, USA
2 shared publications - Dimitrios Palachanis
Centrum Wiskunde & Informatica, Amsterdam, The Netherlands
2 shared publications - Elisabeth G. Rens
University of British Columbia
2 shared publications
Latest Publications
- Open Access
- 27 July 2020
- Published by The Royal Society in Philosophical Transactions of the Royal Society B: Biological Sciences
- Vol. 375 (1807) , 20190386
Autocrine inhibition of cell motility can drive epithelial branching morphogenesis in the absence of growth
Epithelial branching morphogenesis drives the development of organs such as the lung, salivary gland, kidney and the mammary gland. It involves cell proliferation, cell differentiation and cell migration. An elaborate network of chemical and mechanical signals between the epithelium and the surrounding mesenchymal tissues regulates the formation and growth of branching organs. Surprisingly, when cultured in isolation from mesenchymal tissues, many epithelial tissues retain the ability to exhibit branching morphogenesis even in the absence of proliferation. In this work, we propose a simple, experimentally plausible mechanism that can drive branching morphogenesis in the absence of proliferation and cross-talk with the surrounding mesenchymal tissue. The assumptions of our mathematical model derive from in vitro observations of the behaviour of mammary epithelial cells. These data show that autocrine secretion of the growth factor TGF β 1 inhibits the formation of cell protrusions, leading to curvature-dependent inhibition of sprouting. Our hybrid cellular Potts and partial-differential equation model correctly reproduces the experimentally observed tissue-geometry-dependent determination of the sites of branching, and it suffices for the formation of self-avoiding branching structures in the absence and also in the presence of cell proliferation. This article is part of the theme issue ‘Multi-scale analysis and modelling of collective migration in biological systems’.
- 27 July 2020
- Published by The Royal Society in Philosophical Transactions of the Royal Society B: Biological Sciences
- Vol. 375 (1807) , 20190386
Open AccessAutocrine inhibition of cell motility can drive epithelial branching morphogenesis in the absence of growth
Epithelial branching morphogenesis drives the development of organs such as the lung, salivary gland, kidney and the mammary gland. It involves cell proliferation, cell differentiation and cell migration. An elaborate network of chemical and mechanical signals between the epithelium and the surrounding mesenchymal tissues regulates the formation and growth of branching organs. Surprisingly, when cultured in isolation from mesenchymal tissues, many epithelial tissues retain the ability to exhibit branching morphogenesis even in the absence of proliferation. In this work, we propose a simple, experimentally plausible mechanism that can drive branching morphogenesis in the absence of proliferation and cross-talk with the surrounding mesenchymal tissue. The assumptions of our mathematical model derive from in vitro observations of the behaviour of mammary epithelial cells. These data show that autocrine secretion of the growth factor TGF β 1 inhibits the formation of cell protrusions, leading to curvature-dependent inhibition of sprouting. Our hybrid cellular Potts and partial-differential equation model correctly reproduces the experimentally observed tissue-geometry-dependent determination of the sites of branching, and it suffices for the formation of self-avoiding branching structures in the absence and also in the presence of cell proliferation. This article is part of the theme issue ‘Multi-scale analysis and modelling of collective migration in biological systems’.
- Open Access
Autocrine inhibition of cell motility can drive epithelial branching morphogenesis in absence of growth
Epithelial branching morphogenesis drives the development of organs such as the lung, salivary gland, kidney and the mammary gland. It involves cell proliferation, cell differentiation and cell migration. An elaborate network of chemical and mechanical signals between the epithelium and the surrounding mesenchymal tissues regulates the formation and growth of branching organs. Surprisingly, when cultured in isolation from mesenchymal tissues, many epithelial tissues retain the ability to exhibit branching morphogenesis even in absence of proliferation. In this work, we propose a simple, experimentally-plausible mechanism that can drive branching morphogenesis in absence of proliferation and cross-talk with the surrounding mesenchymal tissue. The assumptions of our mathematical model derive from in vitro observations of the behavior of mammary epithelial cells. These data show that autocrine secretion of the growth factor TGF β 1 inhibits the formation of cell protrusions, leading to curvature dependent inhibition of sprouting. Our hybrid cellular Potts and partial-differential equation model correctly reproduces the experimentally observed tissue-geometry dependent determination of the sites of branching, and it suffices for the formation of self-avoiding branching structures in absence and also in presence of cell proliferation.
Open AccessAutocrine inhibition of cell motility can drive epithelial branching morphogenesis in absence of growth
Epithelial branching morphogenesis drives the development of organs such as the lung, salivary gland, kidney and the mammary gland. It involves cell proliferation, cell differentiation and cell migration. An elaborate network of chemical and mechanical signals between the epithelium and the surrounding mesenchymal tissues regulates the formation and growth of branching organs. Surprisingly, when cultured in isolation from mesenchymal tissues, many epithelial tissues retain the ability to exhibit branching morphogenesis even in absence of proliferation. In this work, we propose a simple, experimentally-plausible mechanism that can drive branching morphogenesis in absence of proliferation and cross-talk with the surrounding mesenchymal tissue. The assumptions of our mathematical model derive from in vitro observations of the behavior of mammary epithelial cells. These data show that autocrine secretion of the growth factor TGF β 1 inhibits the formation of cell protrusions, leading to curvature dependent inhibition of sprouting. Our hybrid cellular Potts and partial-differential equation model correctly reproduces the experimentally observed tissue-geometry dependent determination of the sites of branching, and it suffices for the formation of self-avoiding branching structures in absence and also in presence of cell proliferation.
- Open Access
- 22 April 2019
- Published by Public Library of Science (PLoS) in PLOS Computational Biology
- Vol. 15 (4) , e1007002
Neural crest streaming as an emergent property of tissue interactions during morphogenesis
A fundamental question in embryo morphogenesis is how a complex pattern is established in seemingly uniform tissues. During vertebrate development, neural crest cells differentiate as a continuous mass of tissue along the neural tube and subsequently split into spatially distinct migratory streams to invade the rest of the embryo. How these streams are established is not well understood. Inhibitory signals surrounding the migratory streams led to the idea that position and size of streams are determined by a pre-pattern of such signals. While clear evidence for a pre-pattern in the cranial region is still lacking, all computational models of neural crest migration published so far have assumed a pre-pattern of negative signals that channel the neural crest into streams. Here we test the hypothesis that instead of following a pre-existing pattern, the cranial neural crest creates their own migratory pathway by interacting with the surrounding tissue. By combining theoretical modeling with experimentation, we show that streams emerge from the interaction of the hindbrain neural crest and the neighboring epibranchial placodal tissues, without the need for a pre-existing guidance cue. Our model suggests that the initial collective neural crest invasion is based on short-range repulsion and asymmetric attraction between neighboring tissues. The model provides a coherent explanation for the formation of cranial neural crest streams in concert with previously reported findings and our new in vivo observations. Our results point to a general mechanism of inducing collective invasion patterns. A central question in morphogenesis is how complexity arises from unpatterned tissues. One crucial event in vertebrate development is the migration of neural crest cells into stereotypic streams. Cranial neural crest cells start their migration as a single tissue mass but invade their environment and migrate in distinct streams. While this stream migration is crucial for correct head development and is relatively well studied, it is unclear how the initial stream patterns are formed. Surrounding tissues lack a clear organization prior to neural crest migration, making the existence of a guiding pre-pattern unlikely. In this study we address the question of how the initial neural crest streams are formed by combining theoretical modeling with experimentation and show that neural crest streams emerge from dynamic interactions with neighboring tissues.
- 22 April 2019
- Published by Public Library of Science (PLoS) in PLOS Computational Biology
- Vol. 15 (4) , e1007002
Open AccessNeural crest streaming as an emergent property of tissue interactions during morphogenesis
A fundamental question in embryo morphogenesis is how a complex pattern is established in seemingly uniform tissues. During vertebrate development, neural crest cells differentiate as a continuous mass of tissue along the neural tube and subsequently split into spatially distinct migratory streams to invade the rest of the embryo. How these streams are established is not well understood. Inhibitory signals surrounding the migratory streams led to the idea that position and size of streams are determined by a pre-pattern of such signals. While clear evidence for a pre-pattern in the cranial region is still lacking, all computational models of neural crest migration published so far have assumed a pre-pattern of negative signals that channel the neural crest into streams. Here we test the hypothesis that instead of following a pre-existing pattern, the cranial neural crest creates their own migratory pathway by interacting with the surrounding tissue. By combining theoretical modeling with experimentation, we show that streams emerge from the interaction of the hindbrain neural crest and the neighboring epibranchial placodal tissues, without the need for a pre-existing guidance cue. Our model suggests that the initial collective neural crest invasion is based on short-range repulsion and asymmetric attraction between neighboring tissues. The model provides a coherent explanation for the formation of cranial neural crest streams in concert with previously reported findings and our new in vivo observations. Our results point to a general mechanism of inducing collective invasion patterns. A central question in morphogenesis is how complexity arises from unpatterned tissues. One crucial event in vertebrate development is the migration of neural crest cells into stereotypic streams. Cranial neural crest cells start their migration as a single tissue mass but invade their environment and migrate in distinct streams. While this stream migration is crucial for correct head development and is relatively well studied, it is unclear how the initial stream patterns are formed. Surrounding tissues lack a clear organization prior to neural crest migration, making the existence of a guiding pre-pattern unlikely. In this study we address the question of how the initial neural crest streams are formed by combining theoretical modeling with experimentation and show that neural crest streams emerge from dynamic interactions with neighboring tissues.
- 19 October 2018
- Published by American Association for the Advancement of Science (AAAS) in Science
- Vol. 362 (6412) , 339-343
Supracellular contraction at the rear of neural crest cell groups drives collective chemotaxis
Supracellular cable drives collective cell movement: Neural crest cells migrate far and wide through a vertebrate embryo during development. Shellard et al. used Xenopus and zebrafish embryos to study how these clumps of mesenchymal cells migrate (see the Perspective by Adameyko). Movement was powered by a supracellular actomyosin cable that contracted around the rear of the clump. Similar supracellular contractility at the front was inhibited by a chemotactic signal. The imbalance in forces caused cells to rearrange so that the whole clump would be propelled forward. Science , this issue p. 339 ; see also p. 290
- 19 October 2018
- Published by American Association for the Advancement of Science (AAAS) in Science
- Vol. 362 (6412) , 339-343
Supracellular contraction at the rear of neural crest cell groups drives collective chemotaxis
Supracellular cable drives collective cell movement: Neural crest cells migrate far and wide through a vertebrate embryo during development. Shellard et al. used Xenopus and zebrafish embryos to study how these clumps of mesenchymal cells migrate (see the Perspective by Adameyko). Movement was powered by a supracellular actomyosin cable that contracted around the rear of the clump. Similar supracellular contractility at the front was inhibited by a chemotactic signal. The imbalance in forces caused cells to rearrange so that the whole clump would be propelled forward. Science , this issue p. 339 ; see also p. 290
- Open Access
- 17 July 2017
- Published by Public Library of Science (PLoS) in PLOS Computational Biology
- Vol. 13 (7) , e1005635
Blood vessel tortuosity selects against evolution of aggressive tumor cells in confined tissue environments: A modeling approach
Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype of each cell determines its success. Selection in this process is imposed by both the microenvironment (neighboring cells, extracellular matrix, and diffusing substances), and the whole of the organism through for example the blood supply. In this view, the development of tumor cells is in close interaction with their increasingly changing environment: the more cells can change, the more their environment will change. Furthermore, instabilities are also introduced on the organism level: blood supply can be blocked by increased tissue pressure or the tortuosity of the tumor-neovascular vessels. This coupling between cell, microenvironment, and organism results in behavior that is hard to predict. Here we introduce a cell-based computational model to study the effect of blood flow obstruction on the micro-evolution of cells within a cancerous tissue. We demonstrate that stages of tumor development emerge naturally, without the need for sequential mutation of specific genes. Secondly, we show that instabilities in blood supply can impact the overall development of tumors and lead to the extinction of the dominant aggressive phenotype, showing a clear distinction between the fitness at the cell level and survival of the population. This provides new insights into potential side effects of recent tumor vasculature normalization approaches. Multicellular organisms control their cells to facilitate higher level function of the whole organism. In tumors, this control is lost and cells are allowed to enhance their fitness by, for example, increased proliferation. Tumor cells continue to change their behavior through accumulating mutations, leading to a complex and highly heterogeneous structure. Several computational studies have investigated the emergent structures of such mutating group of cells and led to the recognition that cellular heterogeneity within tumors is essential to explain the observed morphologies. Most of these studies have considered a limited number of possible cell phenotypes, an isolated tumor cell population, unlimited growth space around the tumor, often with an inexhaustible source of nutrients. Here we introduce a modeling approach that takes into account the limited growth space around the tumor, localized nutrient sources, cellular metabolism, and mutation in a continuous phenotype space. The model reproduces the Warburg effect due to the limited nutrient supply leading to an irreversible switch in cellular metabolism, and, consistently with previous models, exhibits stages of development together with a natural selection for a rapidly growing phenotype. This phenotype locally emerges in stable environments, but when nutrient supply becomes erratic, these show less resilience and are outcompeted by slow growers.
- 17 July 2017
- Published by Public Library of Science (PLoS) in PLOS Computational Biology
- Vol. 13 (7) , e1005635
Open AccessBlood vessel tortuosity selects against evolution of aggressive tumor cells in confined tissue environments: A modeling approach
Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype of each cell determines its success. Selection in this process is imposed by both the microenvironment (neighboring cells, extracellular matrix, and diffusing substances), and the whole of the organism through for example the blood supply. In this view, the development of tumor cells is in close interaction with their increasingly changing environment: the more cells can change, the more their environment will change. Furthermore, instabilities are also introduced on the organism level: blood supply can be blocked by increased tissue pressure or the tortuosity of the tumor-neovascular vessels. This coupling between cell, microenvironment, and organism results in behavior that is hard to predict. Here we introduce a cell-based computational model to study the effect of blood flow obstruction on the micro-evolution of cells within a cancerous tissue. We demonstrate that stages of tumor development emerge naturally, without the need for sequential mutation of specific genes. Secondly, we show that instabilities in blood supply can impact the overall development of tumors and lead to the extinction of the dominant aggressive phenotype, showing a clear distinction between the fitness at the cell level and survival of the population. This provides new insights into potential side effects of recent tumor vasculature normalization approaches. Multicellular organisms control their cells to facilitate higher level function of the whole organism. In tumors, this control is lost and cells are allowed to enhance their fitness by, for example, increased proliferation. Tumor cells continue to change their behavior through accumulating mutations, leading to a complex and highly heterogeneous structure. Several computational studies have investigated the emergent structures of such mutating group of cells and led to the recognition that cellular heterogeneity within tumors is essential to explain the observed morphologies. Most of these studies have considered a limited number of possible cell phenotypes, an isolated tumor cell population, unlimited growth space around the tumor, often with an inexhaustible source of nutrients. Here we introduce a modeling approach that takes into account the limited growth space around the tumor, localized nutrient sources, cellular metabolism, and mutation in a continuous phenotype space. The model reproduces the Warburg effect due to the limited nutrient supply leading to an irreversible switch in cellular metabolism, and, consistently with previous models, exhibits stages of development together with a natural selection for a rapidly growing phenotype. This phenotype locally emerges in stable environments, but when nutrient supply becomes erratic, these show less resilience and are outcompeted by slow growers.
- Open Access
Blood Vessel Tortuosity Selects against Evolution of Agressive Tumor Cells in Confined Tissue Environments: a Modeling Approach
Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype of each cell determines its success. Selection in this process is imposed by both the microenvironment (neighboring cells, extracellular matrix, and diffusing substances), and the whole of the organism through for example the blood supply. In this view, the development of tumor cells is in close interaction with their increasingly changing environment: the more cells can change, the more their environment will change. Furthermore, instabilities are also introduced on the organism level: blood supply can be blocked by increased tissue pressure or the tortuosity of the tumor-neovascular vessels. This coupling between cell, microenvironment, and organism results in behavior that is hard to predict. Here we introduce a cell-based computational model to study the effect of blood flow obstruction on the micro-evolution of cells within a cancerous tissue. We demonstrate that stages of tumor development emerge naturally, without the need for sequential mutation of specific genes. Secondly, we show that instabilities in blood supply can impact the overall development of tumors and lead to the extinction of the dominant aggressive phenotype, showing a clear distinction between the fitness at the cell level and survival of the population. This provides new insights into potential side effects of recent tumor vasculature renormalization approaches.
Open AccessBlood Vessel Tortuosity Selects against Evolution of Agressive Tumor Cells in Confined Tissue Environments: a Modeling Approach
Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype of each cell determines its success. Selection in this process is imposed by both the microenvironment (neighboring cells, extracellular matrix, and diffusing substances), and the whole of the organism through for example the blood supply. In this view, the development of tumor cells is in close interaction with their increasingly changing environment: the more cells can change, the more their environment will change. Furthermore, instabilities are also introduced on the organism level: blood supply can be blocked by increased tissue pressure or the tortuosity of the tumor-neovascular vessels. This coupling between cell, microenvironment, and organism results in behavior that is hard to predict. Here we introduce a cell-based computational model to study the effect of blood flow obstruction on the micro-evolution of cells within a cancerous tissue. We demonstrate that stages of tumor development emerge naturally, without the need for sequential mutation of specific genes. Secondly, we show that instabilities in blood supply can impact the overall development of tumors and lead to the extinction of the dominant aggressive phenotype, showing a clear distinction between the fitness at the cell level and survival of the population. This provides new insights into potential side effects of recent tumor vasculature renormalization approaches.
- 1 October 2016
- Published by Elsevier in Current Opinion in Cell Biology
- Vol. 42, 22-28
Modelling collective cell migration of neural crest
- 1 October 2016
- Published by Elsevier in Current Opinion in Cell Biology
- Vol. 42, 22-28
Modelling collective cell migration of neural crest
- Open Access
- 30 May 2016
- Published by Rockefeller University Press in Journal of Cell Biology
- Vol. 213 (5) , 543-555
In vivo confinement promotes collective migration of neural crest cells
Collective cell migration is fundamental throughout development and in many diseases. Spatial confinement using micropatterns has been shown to promote collective cell migration in vitro, but its effect in vivo remains unclear. Combining computational and experimental approaches, we show that the in vivo collective migration of neural crest cells (NCCs) depends on such confinement. We demonstrate that confinement may be imposed by the spatiotemporal distribution of a nonpermissive substrate provided by versican, an extracellular matrix molecule previously proposed to have contrasting roles: barrier or promoter of NCC migration. We resolve the controversy by demonstrating that versican works as an inhibitor of NCC migration and also acts as a guiding cue by forming exclusionary boundaries. Our model predicts an optimal number of cells in a given confinement width to allow for directional migration. This optimum coincides with the width of neural crest migratory streams analyzed across different species, proposing an explanation for the highly conserved nature of NCC streams during development.
- 30 May 2016
- Published by Rockefeller University Press in Journal of Cell Biology
- Vol. 213 (5) , 543-555
Open AccessIn vivo confinement promotes collective migration of neural crest cells
Collective cell migration is fundamental throughout development and in many diseases. Spatial confinement using micropatterns has been shown to promote collective cell migration in vitro, but its effect in vivo remains unclear. Combining computational and experimental approaches, we show that the in vivo collective migration of neural crest cells (NCCs) depends on such confinement. We demonstrate that confinement may be imposed by the spatiotemporal distribution of a nonpermissive substrate provided by versican, an extracellular matrix molecule previously proposed to have contrasting roles: barrier or promoter of NCC migration. We resolve the controversy by demonstrating that versican works as an inhibitor of NCC migration and also acts as a guiding cue by forming exclusionary boundaries. Our model predicts an optimal number of cells in a given confinement width to allow for directional migration. This optimum coincides with the width of neural crest migratory streams analyzed across different species, proposing an explanation for the highly conserved nature of NCC streams during development.
- Open Access
- 1 May 2016
- Published by Elsevier in Developmental Cell
- Vol. 37 (3) , 213-225
The Molecular Basis of Radial Intercalation during Tissue Spreading in Early Development
- 1 May 2016
- Published by Elsevier in Developmental Cell
- Vol. 37 (3) , 213-225
Open AccessThe Molecular Basis of Radial Intercalation during Tissue Spreading in Early Development
- Open Access
- 1 December 2015
- Published by Elsevier in Computational Particle Mechanics
- Vol. 2 (4) , 371-379
Particle-based simulation of ellipse-shaped particle aggregation as a model for vascular network formation
- 1 December 2015
- Published by Elsevier in Computational Particle Mechanics
- Vol. 2 (4) , 371-379
Open AccessParticle-based simulation of ellipse-shaped particle aggregation as a model for vascular network formation