Taekyu Joo
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Taekyu Joo has a total of 219 co-authors. Here are the top co-authors by number of shared publications:
- Nga Lee Ng
California Institute of Technology, Pasadena, CA 91125, USA
33 shared publications Cheuk Ki Wong
School of Energy and Environment, City University of Hong Kong, Hong Kong SAR, China
8 shared publications- Drew R. Gentner
Department of Chemical and Environmental Engineering, Yale University, New Haven, CT, USA
8 shared publications Ruihan Ma
School of Energy and Environment, City University of Hong Kong, Hong Kong SAR, China
8 shared publicationsShun Yeung
School of Energy and Environment, City University of Hong Kong, Hong Kong SAR, China
8 shared publications- Theodora Nah
School of Energy and Environment and State Key Laboratory of Marine Environmental Health, City University of Hong Kong, Hong Kong SAR 999077, China
8 shared publications
Latest Publications
- Open Access
- 2 October 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-31
Comment on egusphere-2026-4881
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- 2 October 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-31
Open AccessComment on egusphere-2026-4881
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- Open Access
- 20 September 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-31
Comment on egusphere-2026-4881
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- 20 September 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-31
Open AccessComment on egusphere-2026-4881
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- Open Access
- 19 August 2026
- Published by Copernicus GmbH in EGUsphere
- p. 1-31
Furfural Exhibits Distinct Photooxidation and Secondary Organic Aerosol Formation Among Biomass Burning Related Furanoids
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH<5 %. Furfural exhibits distinct oxidation chemistry compared with methylfurans: furfural alkyl radical preferentially reacts with NO2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- 19 August 2026
- Published by Copernicus GmbH in EGUsphere
- p. 1-31
Open AccessFurfural Exhibits Distinct Photooxidation and Secondary Organic Aerosol Formation Among Biomass Burning Related Furanoids
Furanoids are a major compound class emitted during biomass burning and are highly reactive toward hydroxyl radicals (OH), suggesting their oxidation may contribute to secondary organic aerosol (SOA) formation. Previous furanoid studies focused on gas-phase kinetics, leaving SOA formation poorly understood. Here, we investigate the gas-phase oxidation and SOA formation from furfural, 2-methylfuran, and 3-methylfuran reactions with OH radicals in the presence of nitrogen oxides at RH<5 %. Furfural exhibits distinct oxidation chemistry compared with methylfurans: furfural alkyl radical preferentially reacts with NO2, whereas methylfuran oxidation proceeds via peroxy radical (RO2)+NO channel to form alkoxy radicals. Methylfuran isomers also differ in oxidation product speciation, with 2-methylfuran generating C4 and C5 compounds, whereas 3-methylfuran predominantly forms C5 compounds. C4H2O3, potentially maleic anhydride, increases continuously during all furanoid oxidations, supporting its potential as an aged biomass burning marker. Furfural produces the highest SOA mass and yield (66.3 µg⋅m⁻³, 9.8 %), followed by 2-methylfuran (10.3 µg⋅m⁻³, 1.4 %) and 3-methylfuran (7.2 µg⋅m⁻³, 1.1 %). Compared with methylfuran SOA, furfural SOA shows stronger signatures of lower-volatility oligomers, with higher contributions from large m/z fragments, a greater degree of unsaturation, broader thermograms, and more reduced CHON species (O/N<3). Accordingly, estimated particulate organic nitrate fraction is highest for 2-methylfuran SOA (~45 %), followed by 3-methylfuran (~36 %) and furfural (~11 %). These results show that both substituent type and position should be considered when representing furanoid oxidation in atmospheric models.
- Open Access
- 6 August 2026
- Published by Copernicus GmbH in Atmospheric Measurement Techniques
- Vol. 19 (15) , 5027-5049
UCB-GLOBES: an open-access mass spectral database of identified and unidentified atmospheric organic compounds
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27 000 mass spectra (MS) of the trimethylsilyl derivatives of semi-volatile organic aerosol (OA) analytes in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). Analytes were observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation. These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, any structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into the NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in databases of known compounds (i.e. NIST MS Database, Adams Essential Oil, MANE Flavor and Fragrance Company). This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified using these databases or known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. This can ultimately inform future research priorities for the chemical characterization of atmospheric organic samples.
- 6 August 2026
- Published by Copernicus GmbH in Atmospheric Measurement Techniques
- Vol. 19 (15) , 5027-5049
Open AccessUCB-GLOBES: an open-access mass spectral database of identified and unidentified atmospheric organic compounds
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27 000 mass spectra (MS) of the trimethylsilyl derivatives of semi-volatile organic aerosol (OA) analytes in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). Analytes were observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation. These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, any structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into the NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in databases of known compounds (i.e. NIST MS Database, Adams Essential Oil, MANE Flavor and Fragrance Company). This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified using these databases or known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. This can ultimately inform future research priorities for the chemical characterization of atmospheric organic samples.
- Open Access
- 4 June 2026
- Published by Elsevier in Environmental Research
- Vol. 305 (Pt 1) , 124969
Synoptic-scale transport drives wintertime secondary organic aerosol variability and high-PM episodes in Seoul
- 4 June 2026
- Published by Elsevier in Environmental Research
- Vol. 305 (Pt 1) , 124969
Open AccessSynoptic-scale transport drives wintertime secondary organic aerosol variability and high-PM episodes in Seoul
- Open Access
- 26 March 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-34
Comment on egusphere-2026-116
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27,000 mass spectra (MS) of semi-volatile organic aerosol (OA) analytes observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1,513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in the NIST MS Database. This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified in the NIST MS database or with known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. inform future research priorities for the chemical characterization of atmospheric organic samples.
- 26 March 2026
- Published by Copernicus GmbH
- Vol. 2026, 1-34
Open AccessComment on egusphere-2026-116
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27,000 mass spectra (MS) of semi-volatile organic aerosol (OA) analytes observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1,513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in the NIST MS Database. This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified in the NIST MS database or with known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. inform future research priorities for the chemical characterization of atmospheric organic samples.
- Open Access
- 5 February 2026
- Published by Copernicus GmbH
Supplementary material to "UCB-GLOBES: An open-access mass spectral database of identified and unidentified atmospheric organic compounds"
- 5 February 2026
- Published by Copernicus GmbH
Open AccessSupplementary material to "UCB-GLOBES: An open-access mass spectral database of identified and unidentified atmospheric organic compounds"
- Open Access
- 5 February 2026
- Published by Copernicus GmbH in EGUsphere
- Vol. 2026, 1-34
UCB-GLOBES: An open-access mass spectral database of identified and unidentified atmospheric organic compounds
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27,000 mass spectra (MS) of semi-volatile organic aerosol (OA) analytes observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1,513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in the NIST MS Database. This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified in the NIST MS database or with known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. inform future research priorities for the chemical characterization of atmospheric organic samples.
- 5 February 2026
- Published by Copernicus GmbH in EGUsphere
- Vol. 2026, 1-34
Open AccessUCB-GLOBES: An open-access mass spectral database of identified and unidentified atmospheric organic compounds
Chemical characterization of atmospheric organic aerosols using gas chromatography with 70 eV electron ionization mass spectrometry (GC/EI-MS) has been used for decades in advancing molecular marker detection and identification, though primarily through suspect screening and/or targeted analyses. To advance non-targeted analyses of environmental samples, we have catalogued approximately 27,000 mass spectra (MS) of semi-volatile organic aerosol (OA) analytes observed in ambient samples from the U.S. and the Central Amazon and/or laboratory simulations of secondary OA (SOA) formation in the open-access University of California Berkeley Goldstein Library of Organic Biogenic Environmental Spectra (UCB-GLOBES). These samples are representative of OA under urban and biomass burning influences as well as SOA derived from biogenic precursors (e.g., isoprene, monoterpenes, sesquiterpenes) and biomass burning intermediates. MS are documented in UCB-GLOBES without regard to known chemical identity, annotated with extensive metadata such as sample source/experimental conditions, structural information gained from MS analyses, and predicted chemical properties such as average carbon oxidation state and carbon number. UCB-GLOBES MS are compatible for importing into NIST MS Search program, and we have also provided a Jupyter Notebook for MS visualization and comparisons. We demonstrate the utility of UCB-GLOBES through MS reanalyses of prior analytes observed in ambient data, finding a 20 % reduction in the number of analytes assigned to OA source categories reliant solely on time series correlation and an overall 11 % increase in new MS-based OA source categorization for the Southeast U.S. For 1,513 analytes observed previously in the Central Amazon, we found 375 MS matches using UCB-GLOBES vs. 136 MS matches during prior analyses, representing a 14 % gain in newly confirmed or newly categorized OA species. While OA from laboratory oxidation experiments in UCB-GLOBES are highly diverse chemically, on average only 29 % of UCB-GLOBES MS have a mass spectral match to another MS entry in UCB-GLOBES and/or in the NIST MS Database. This indicates that roughly 70 % of UCB-GLOBES MS are unique thus far, not observed more than once among the laboratory oxidation samples and ambient data in UCB-GLOBES MS. Further, only 18 % can be positively identified in the NIST MS database or with known authentic standards. This points to a large gap between these laboratory simulations and ambient OA. Overall, the UCB-GLOBES database can be utilized for improving confidence in OA source categorization and/or identification, novel chemical marker discovery, tracking chemical diversity, de novo structure and properties prediction, and improving MS search and matching algorithms. inform future research priorities for the chemical characterization of atmospheric organic samples.