George-Rafael Samantsidis
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
George-Rafael Samantsidis has a total of 32 co-authors. Here are the top co-authors by number of shared publications:
- John Vontas
Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, 71409 Heraklion, Greece
4 shared publications - Ryan C. Smith
Department of Plant Pathology, Entomology and Microbiology Iowa State University Ames Iowa USA
4 shared publications - Shane Denecke
Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, 71409 Heraklion, Greece
3 shared publications - Enzo Mameli
Harvard Medical School
2 shared publications - Hyeogsun Kwon
Department of Plant Pathology, Entomology and Microbiology, Iowa State University, Ames, Iowa, USA
2 shared publications Matthew Butnaru
Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, USA
2 shared publications
Latest Publications
- Open Access
- 3 December 2025
- Published by Springer Nature in Nature Communications
- Vol. 16 (1) , 10875
Characterization of Anopheles gambiae immune cells through genetic and functional immunophenotyping
Mosquito immune cells, or hemocytes, are integral components of the innate immune responses that define vector competence. To date, the characterization and functional classification of hemocytes has been hindered by the limited availability of genetic resources. Here, we map the composition of mosquito hemocytes by engineering five transgenic Anopheles gambiae lines that express fluorescent proteins under the control of candidate hemocyte promoters. We characterize these five transgenic lines through gene expression and microscopy-based approaches, and examine mosquito immune cell populations by leveraging advanced spectral imaging flow cytometry. We classify mosquito hemocytes into twelve distinct populations based on size, granularity, and ploidy, while defining these hemocyte subtypes based on their phagocytic capacity and the expression of genetic markers. By simultaneously analyzing these morphological and genetic properties, our work highlights the complexity and plasticity of mosquito hemocytes and provides the foundation for deeper investigations into their roles in immunity and pathogen transmission.
- 3 December 2025
- Published by Springer Nature in Nature Communications
- Vol. 16 (1) , 10875
Open AccessCharacterization of Anopheles gambiae immune cells through genetic and functional immunophenotyping
Mosquito immune cells, or hemocytes, are integral components of the innate immune responses that define vector competence. To date, the characterization and functional classification of hemocytes has been hindered by the limited availability of genetic resources. Here, we map the composition of mosquito hemocytes by engineering five transgenic Anopheles gambiae lines that express fluorescent proteins under the control of candidate hemocyte promoters. We characterize these five transgenic lines through gene expression and microscopy-based approaches, and examine mosquito immune cell populations by leveraging advanced spectral imaging flow cytometry. We classify mosquito hemocytes into twelve distinct populations based on size, granularity, and ploidy, while defining these hemocyte subtypes based on their phagocytic capacity and the expression of genetic markers. By simultaneously analyzing these morphological and genetic properties, our work highlights the complexity and plasticity of mosquito hemocytes and provides the foundation for deeper investigations into their roles in immunity and pathogen transmission.
- Open Access
- 24 November 2025
- Published by Springer Nature in Nature Communications
- Vol. 16 (1) , 10323
A genome-wide CRISPR screen in Anopheles mosquito cells identifies fitness and immune cell function-related genes
Anopheles mosquitoes are the sole vector of malaria, the most burdensome vector-borne disease worldwide. At present, strategies for reducing mosquito populations or limiting their ability to transmit disease show the most promise for disease control. Therefore, improving our understanding of mosquito biology and immune function may aid new approaches to limit malaria transmission. Here, we perform genome-wide CRISPR screens in Anopheles mosquito cells to identify genes required for fitness and that confer resistance to clodronate liposomes, which are used to ablate immune cells. The cellular fitness screen identifies 1280 fitness-related genes (393 at highest confidence) that are highly enriched for roles in fundamental cell processes. The clodronate screen identifies resistance factors that impair clodronate liposome function. For the latter, we confirm roles in liposome uptake and processing through in vivo validation in Anopheles gambiae that provide new mechanistic detail of phagolysosome formation and clodronate liposome processing. Altogether, we present a genome-wide CRISPR knockout platform in a major malaria vector and identify genes important for fitness and immune-related processes.
- 24 November 2025
- Published by Springer Nature in Nature Communications
- Vol. 16 (1) , 10323
Open AccessA genome-wide CRISPR screen in Anopheles mosquito cells identifies fitness and immune cell function-related genes
Anopheles mosquitoes are the sole vector of malaria, the most burdensome vector-borne disease worldwide. At present, strategies for reducing mosquito populations or limiting their ability to transmit disease show the most promise for disease control. Therefore, improving our understanding of mosquito biology and immune function may aid new approaches to limit malaria transmission. Here, we perform genome-wide CRISPR screens in Anopheles mosquito cells to identify genes required for fitness and that confer resistance to clodronate liposomes, which are used to ablate immune cells. The cellular fitness screen identifies 1280 fitness-related genes (393 at highest confidence) that are highly enriched for roles in fundamental cell processes. The clodronate screen identifies resistance factors that impair clodronate liposome function. For the latter, we confirm roles in liposome uptake and processing through in vivo validation in Anopheles gambiae that provide new mechanistic detail of phagolysosome formation and clodronate liposome processing. Altogether, we present a genome-wide CRISPR knockout platform in a major malaria vector and identify genes important for fitness and immune-related processes.
- Open Access
Exploring new dimensions of immune cell biology in Anopheles gambiae through genetic immunophenotyping
Mosquito immune cells, or hemocytes, are integral components of the innate immune responses that define vector competence. However, the lack of genetic resources has limited their characterization and our understanding of their functional roles in immune signaling. To overcome these challenges, we engineered transgenic Anopheles gambiae that express fluorescent proteins under the control of candidate hemocyte promoters. Following the characterization of five transgenic constructs through gene expression and microscopy-based approaches, we examine mosquito immune cell populations by leveraging advanced spectral imaging flow cytometry. Our results comprehensively map the composition of mosquito hemocytes, classifying them into twelve distinct populations based on size, granularity, ploidy, phagocytic capacity, and the expression of PPO6, SPARC, and LRIM15 genetic markers. Together, our novel use of morphological properties and genetic markers provides increased resolution into our understanding of mosquito hemocytes, highlighting the complexity and plasticity of these immune cell populations, while providing the foundation for deeper investigations into their roles in immunity and pathogen transmission.
Open AccessExploring new dimensions of immune cell biology in Anopheles gambiae through genetic immunophenotyping
Mosquito immune cells, or hemocytes, are integral components of the innate immune responses that define vector competence. However, the lack of genetic resources has limited their characterization and our understanding of their functional roles in immune signaling. To overcome these challenges, we engineered transgenic Anopheles gambiae that express fluorescent proteins under the control of candidate hemocyte promoters. Following the characterization of five transgenic constructs through gene expression and microscopy-based approaches, we examine mosquito immune cell populations by leveraging advanced spectral imaging flow cytometry. Our results comprehensively map the composition of mosquito hemocytes, classifying them into twelve distinct populations based on size, granularity, ploidy, phagocytic capacity, and the expression of PPO6, SPARC, and LRIM15 genetic markers. Together, our novel use of morphological properties and genetic markers provides increased resolution into our understanding of mosquito hemocytes, highlighting the complexity and plasticity of these immune cell populations, while providing the foundation for deeper investigations into their roles in immunity and pathogen transmission.
- Open Access
A genome-wide CRISPR screen in Anopheles mosquito cells identifies essential genes and required components of clodronate liposome function
Anopheles mosquitoes are the sole vector of human malaria, the most burdensome vector-borne disease worldwide. Strategies aimed at reducing mosquito populations and limiting their ability to transmit disease show the most promise for disease control. Therefore, gaining an improved understanding of mosquito biology, and specifically that of the immune response, can aid efforts to develop new approaches that limit malaria transmission. Here, we use a genome-wide CRISPR screening approach for the first time in mosquito cells to identify essential genes in Anopheles and identify genes for which knockout confers resistance to clodronate liposomes, which have been widely used in mammals and arthropods to ablate immune cells. In the essential gene screen, we identified a set of 1280 Anopheles genes that are highly enriched for genes involved in fundamental cell processes. For the clodronate liposome screen, we identified several candidate resistance factors and confirm their roles in the uptake and processing of clodronate liposomes through in vivo validation in Anopheles gambiae , providing new mechanistic detail of phagolysosome formation and clodronate liposome function. In summary, we demonstrate the application of a genome-wide CRISPR knockout platform in a major malaria vector and the identification of genes that are important for fitness and immune-related processes.
Open AccessA genome-wide CRISPR screen in Anopheles mosquito cells identifies essential genes and required components of clodronate liposome function
Anopheles mosquitoes are the sole vector of human malaria, the most burdensome vector-borne disease worldwide. Strategies aimed at reducing mosquito populations and limiting their ability to transmit disease show the most promise for disease control. Therefore, gaining an improved understanding of mosquito biology, and specifically that of the immune response, can aid efforts to develop new approaches that limit malaria transmission. Here, we use a genome-wide CRISPR screening approach for the first time in mosquito cells to identify essential genes in Anopheles and identify genes for which knockout confers resistance to clodronate liposomes, which have been widely used in mammals and arthropods to ablate immune cells. In the essential gene screen, we identified a set of 1280 Anopheles genes that are highly enriched for genes involved in fundamental cell processes. For the clodronate liposome screen, we identified several candidate resistance factors and confirm their roles in the uptake and processing of clodronate liposomes through in vivo validation in Anopheles gambiae , providing new mechanistic detail of phagolysosome formation and clodronate liposome function. In summary, we demonstrate the application of a genome-wide CRISPR knockout platform in a major malaria vector and the identification of genes that are important for fitness and immune-related processes.
- 2 September 2022
- Published by Elsevier in Insect Biochemistry and Molecular Biology
- Vol. 151, 103830
Functional characterization of putative ecdysone transporters in lepidopteran pests
- 2 September 2022
- Published by Elsevier in Insect Biochemistry and Molecular Biology
- Vol. 151, 103830
Functional characterization of putative ecdysone transporters in lepidopteran pests
- Open Access
Functional characterization of putative ecdysone transporters in lepidopteran pests
The insect steroid hormone ecdysone plays a critical role in insect development. Several recent studies have shown that ecdysone is transported through O rganic A nion T ransporting P olypeptides (OATPs) in insects such as flies and mosquitoes. However, the conservation of this mechanism across other arthropods and the role of this transporter in canonical ecdysone pathways are less well studied. Herein we functionally characterized the putative ecdysone transporter OATP74D from two major agricultural moth pests: Helicoverpa armigera (cotton bollworm) and Spodoptera frugiperda (fall armyworm) . Phylogenetic analysis of OATP transporters across the superphylum Ecdysozoa revealed that Oatp74D is well represented among arthropod species and appeared only at the root of the arthropod lineage. Partial disruption of Oatp74D in S. frugiperda decreased embryo hatching rate and larval survival, suggesting that this gene is essential for development in vivo . Depletion and re-expression of OatP74D in the lepidoptera cell line RP-HzGUT-AW1(MG) confirmed the gene’s role in ecdysone import and demonstrated that OATP74D is essential for the transcriptional activation of ecdysone responsive genes including caspase-3 , implicating this transporter in cell death pathways. Establishment of a simple and robust luciferase assay using the RP-HzGUT- AW1(MG) cell line demonstrated that both HaOATP74D and SfOATP74D are inhibited by rifampicin, a well-known organic anion transporter inhibitor. Overall, this work sheds more light on ecdysone uptake mechanisms across insect species and broadens our knowledge of the physiological roles of OATPs in the transportation of endogenous substrates. Author Summary: The insect steroid hormone ecdysone is critical in regulating many aspects of insects’ life, including development and reproduction. A passive diffusion model was never functionally resolved, but was strongly supported until an organic anion transporting polypeptide was identified to mediate the transport of the hormone. The OATP74D, belonging to the Solute carrier superfamily, has been identified and functionally characterized for the first time in Drosophila melanogaster . Although phylogenetic analysis suggests that the Drosophila Oatp74D is probably conserved among several insect species, the theory for transporter mediated ecdysone uptake cannot be generalized to all insects without concrete proof. In here we provide functional evidence that the Oatp74D of two lepidopteran pest species: Helicoverpa armigera and Spodoptera frugiperda , is highly required for insect survival and development. Furthermore, we reveal that the OATP74D is necessary to regulate the expression of several ecdysone response genes, including caspase-3 which is involved in programmed cell death. In addition, we have developed a cell-based platform for screening chemical compounds against the lepidopteran orthologs of Oat74D and rifampicin was functionally shown to inhibit ecdysone uptake. Taken all together, our study reveals that Oatp74D is conserved among several arthropod species in the ecdysone pathway and given the high necessity for an effective control of these two lepidopteran species, we hypothesized that OATP74D could serve as a possible drug target in those two species.
Open AccessFunctional characterization of putative ecdysone transporters in lepidopteran pests
The insect steroid hormone ecdysone plays a critical role in insect development. Several recent studies have shown that ecdysone is transported through O rganic A nion T ransporting P olypeptides (OATPs) in insects such as flies and mosquitoes. However, the conservation of this mechanism across other arthropods and the role of this transporter in canonical ecdysone pathways are less well studied. Herein we functionally characterized the putative ecdysone transporter OATP74D from two major agricultural moth pests: Helicoverpa armigera (cotton bollworm) and Spodoptera frugiperda (fall armyworm) . Phylogenetic analysis of OATP transporters across the superphylum Ecdysozoa revealed that Oatp74D is well represented among arthropod species and appeared only at the root of the arthropod lineage. Partial disruption of Oatp74D in S. frugiperda decreased embryo hatching rate and larval survival, suggesting that this gene is essential for development in vivo . Depletion and re-expression of OatP74D in the lepidoptera cell line RP-HzGUT-AW1(MG) confirmed the gene’s role in ecdysone import and demonstrated that OATP74D is essential for the transcriptional activation of ecdysone responsive genes including caspase-3 , implicating this transporter in cell death pathways. Establishment of a simple and robust luciferase assay using the RP-HzGUT- AW1(MG) cell line demonstrated that both HaOATP74D and SfOATP74D are inhibited by rifampicin, a well-known organic anion transporter inhibitor. Overall, this work sheds more light on ecdysone uptake mechanisms across insect species and broadens our knowledge of the physiological roles of OATPs in the transportation of endogenous substrates. Author Summary: The insect steroid hormone ecdysone is critical in regulating many aspects of insects’ life, including development and reproduction. A passive diffusion model was never functionally resolved, but was strongly supported until an organic anion transporting polypeptide was identified to mediate the transport of the hormone. The OATP74D, belonging to the Solute carrier superfamily, has been identified and functionally characterized for the first time in Drosophila melanogaster . Although phylogenetic analysis suggests that the Drosophila Oatp74D is probably conserved among several insect species, the theory for transporter mediated ecdysone uptake cannot be generalized to all insects without concrete proof. In here we provide functional evidence that the Oatp74D of two lepidopteran pest species: Helicoverpa armigera and Spodoptera frugiperda , is highly required for insect survival and development. Furthermore, we reveal that the OATP74D is necessary to regulate the expression of several ecdysone response genes, including caspase-3 which is involved in programmed cell death. In addition, we have developed a cell-based platform for screening chemical compounds against the lepidopteran orthologs of Oat74D and rifampicin was functionally shown to inhibit ecdysone uptake. Taken all together, our study reveals that Oatp74D is conserved among several arthropod species in the ecdysone pathway and given the high necessity for an effective control of these two lepidopteran species, we hypothesized that OATP74D could serve as a possible drug target in those two species.
- 4 January 2022
- Published by Elsevier in Insect Biochemistry and Molecular Biology
- Vol. 142
Over-expression in cis of the midgut P450 CYP392A16 contributes to abamectin resistance in Tetranychus urticae
- 4 January 2022
- Published by Elsevier in Insect Biochemistry and Molecular Biology
- Vol. 142
Over-expression in cis of the midgut P450 CYP392A16 contributes to abamectin resistance in Tetranychus urticae
- Open Access
- 27 May 2020
- Published by The Royal Society in Proceedings Of The Royal Society B-Biological Sciences
- Vol. 287 (1927) , 20200838
‘What I cannot create, I do not understand’: functionally validated synergism of metabolic and target site insecticide resistance
The putative synergistic action of target-site mutations and enhanced detoxification in pyrethroid resistance in insects has been hypothesized as a major evolutionary mechanism responsible for dramatic consequences in malaria incidence and crop production. Combining genetic transformation and CRISPR/Cas9 genome modification, we generated transgenic Drosophila lines expressing pyrethroid metabolizing P450 enzymes in a genetic background along with engineered mutations in the voltage-gated sodium channel ( para ) known to confer target-site resistance. Genotypes expressing the yellow fever mosquito Aedes aegypti Cyp9J28 while also bearing the para V1016G mutation displayed substantially greater resistance ratio (RR) against deltamethrin than the product of each individual mechanism (RR combined : 19.85 > RR Cyp9J28 : 1.77 × RR V1016G : 3.00). Genotypes expressing Brassicogethes aeneus pollen beetle Cyp6BQ23 and also bearing the para L1014F ( kdr ) mutation, displayed an almost multiplicative RR (RR combined : 75.19 ≥ RR Cyp6BQ23 : 5.74 × RR L1014F : 12.74). Reduced pyrethroid affinity at the target site, delaying saturation while simultaneously extending the duration of P450-driven detoxification, is proposed as a possible underlying mechanism. Combinations of target site and P450 resistance loci might be unfavourable in field populations in the absence of insecticide selection, as they exert some fitness disadvantage in development time and fecundity. These are major considerations from the insecticide resistance management viewpoint in both public health and agriculture.
- 27 May 2020
- Published by The Royal Society in Proceedings Of The Royal Society B-Biological Sciences
- Vol. 287 (1927) , 20200838
Open Access‘What I cannot create, I do not understand’: functionally validated synergism of metabolic and target site insecticide resistance
The putative synergistic action of target-site mutations and enhanced detoxification in pyrethroid resistance in insects has been hypothesized as a major evolutionary mechanism responsible for dramatic consequences in malaria incidence and crop production. Combining genetic transformation and CRISPR/Cas9 genome modification, we generated transgenic Drosophila lines expressing pyrethroid metabolizing P450 enzymes in a genetic background along with engineered mutations in the voltage-gated sodium channel ( para ) known to confer target-site resistance. Genotypes expressing the yellow fever mosquito Aedes aegypti Cyp9J28 while also bearing the para V1016G mutation displayed substantially greater resistance ratio (RR) against deltamethrin than the product of each individual mechanism (RR combined : 19.85 > RR Cyp9J28 : 1.77 × RR V1016G : 3.00). Genotypes expressing Brassicogethes aeneus pollen beetle Cyp6BQ23 and also bearing the para L1014F ( kdr ) mutation, displayed an almost multiplicative RR (RR combined : 75.19 ≥ RR Cyp6BQ23 : 5.74 × RR L1014F : 12.74). Reduced pyrethroid affinity at the target site, delaying saturation while simultaneously extending the duration of P450-driven detoxification, is proposed as a possible underlying mechanism. Combinations of target site and P450 resistance loci might be unfavourable in field populations in the absence of insecticide selection, as they exert some fitness disadvantage in development time and fecundity. These are major considerations from the insecticide resistance management viewpoint in both public health and agriculture.