Yumei Li
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Yumei Li has a total of 61 co-authors. Here are the top co-authors by number of shared publications:
- Yonghong Zhang
College of Animal Science, Jilin University Changchun China
5 shared publications - Yijing Yin
College of Animal Science, Jilin University, Changchun 130062, China
4 shared publications - Yuwei Yang
College of Animal Science Jilin University Changchun China
4 shared publications - Jing Ren
College of Animal Science, Jilin University, Changchun 130062, China
3 shared publications - Hongyu Ni
College of Animal Science, Jilin University, Changchun 130062, China
2 shared publications - Hongyu Ni
College of Animal Science, Jilin University, Changchun 130062, China
2 shared publications
Latest Publications
- Open Access
- 1 August 2024
- Published by Asian Australasian Association of Animal Production Societies in Animal Bioscience
- Vol. 37 (8) , 1428-1439
Gut microbiota derived from fecal microbiota transplantation enhances body weight of Mimas squabs
Objective: Compared to Mimas pigeons, Shiqi pigeons exhibit greater tolerance to coarse feeding because of their abundant gut microbiota. Here, to investigate the potential of utilizing intestinal flora derived from Shiqi pigeons, the intestinal flora and body indices of Mimas squabs were evaluated after fecal microbiota transplantation (FMT) from donors.Methods: A total of 90 one-day-old squabs were randomly divided into the control group (CON), the low-concentration group (LC) and the high-concentration group (HC): gavaged with 200 μL of bacterial solution at concentrations of 0, 0.1, and 0.2 g/15 mL, respectively.Results: The results suggested that FMT improved the body weight of Mimas squabs in the HC and LC groups (p<0.01), and 0.1 g/15 mL was the optimal dose during FMT. After 16S rRNA sequencing was performed, compared to those in the CON group, the abundance levels of microflora, especially Lactobacillus, Muribaculaceae, and Megasphaera (p<0.05), in the FMT-treated groups were markedly greater. Random forest analysis indicated that the main functions of key microbes involve pathways associated with metabolism, further illustrating their important role in the host body.Conclusion: FMT has been determined to be a viable method for augmenting the weight and intestinal microbiota of squabs, representing a unique avenue for enhancing the economic feasibility of squab breeding.
- 1 August 2024
- Published by Asian Australasian Association of Animal Production Societies in Animal Bioscience
- Vol. 37 (8) , 1428-1439
Open AccessGut microbiota derived from fecal microbiota transplantation enhances body weight of Mimas squabs
Objective: Compared to Mimas pigeons, Shiqi pigeons exhibit greater tolerance to coarse feeding because of their abundant gut microbiota. Here, to investigate the potential of utilizing intestinal flora derived from Shiqi pigeons, the intestinal flora and body indices of Mimas squabs were evaluated after fecal microbiota transplantation (FMT) from donors.Methods: A total of 90 one-day-old squabs were randomly divided into the control group (CON), the low-concentration group (LC) and the high-concentration group (HC): gavaged with 200 μL of bacterial solution at concentrations of 0, 0.1, and 0.2 g/15 mL, respectively.Results: The results suggested that FMT improved the body weight of Mimas squabs in the HC and LC groups (p<0.01), and 0.1 g/15 mL was the optimal dose during FMT. After 16S rRNA sequencing was performed, compared to those in the CON group, the abundance levels of microflora, especially Lactobacillus, Muribaculaceae, and Megasphaera (p<0.05), in the FMT-treated groups were markedly greater. Random forest analysis indicated that the main functions of key microbes involve pathways associated with metabolism, further illustrating their important role in the host body.Conclusion: FMT has been determined to be a viable method for augmenting the weight and intestinal microbiota of squabs, representing a unique avenue for enhancing the economic feasibility of squab breeding.
- Open Access
Optimization of Fermented Maize Stover for the Fattening Phase of Geese: Effect on Production Performance and Gut Microflora
To optimize the utilization of fermented maize stover (FMS) feed during the fattening phase of Xianghai flying geese (XFG), a total of 300 XFG at 125 days of age were randomly assigned to four dietary treatment groups with three replicates of 25 in each set. Group A was fed the basal fattening diet, while the B, C, and D groups were fed the basic fattening diet and diets supplemented with 5%, 10% or 15% FMS, respectively. The findings indicate that the production performance indicators (especially the dressed, eviscerated and breast muscle yield) of Group D closely resembled Group A more than Groups B and C. Intestinal morphometry found that the jejunal villus height and the villus height/crypt depth were significantly increased in Group D compared to Group A. Next, 16S rRNA amplicon sequencing of the extracted DNA revealed that beneficial microbiota (Coprococcus and Victivallis) showed increased abundance in Group D. Cecal flora function analysis further revealed that some amino acid and glycerol biosynthesis were found to be associated with growth performance in geese. These findings suggest that incorporating 15% FMS as a substitute for a portion of the feed during the fattening phase of XFG can effectively sustain their production performance, optimize the gut microbial community and morphometrical traits, provide new insight into using non-conventional feed resources to reduce feed cost and improve economic benefits in the breeding industry.
Open AccessOptimization of Fermented Maize Stover for the Fattening Phase of Geese: Effect on Production Performance and Gut Microflora
To optimize the utilization of fermented maize stover (FMS) feed during the fattening phase of Xianghai flying geese (XFG), a total of 300 XFG at 125 days of age were randomly assigned to four dietary treatment groups with three replicates of 25 in each set. Group A was fed the basal fattening diet, while the B, C, and D groups were fed the basic fattening diet and diets supplemented with 5%, 10% or 15% FMS, respectively. The findings indicate that the production performance indicators (especially the dressed, eviscerated and breast muscle yield) of Group D closely resembled Group A more than Groups B and C. Intestinal morphometry found that the jejunal villus height and the villus height/crypt depth were significantly increased in Group D compared to Group A. Next, 16S rRNA amplicon sequencing of the extracted DNA revealed that beneficial microbiota (Coprococcus and Victivallis) showed increased abundance in Group D. Cecal flora function analysis further revealed that some amino acid and glycerol biosynthesis were found to be associated with growth performance in geese. These findings suggest that incorporating 15% FMS as a substitute for a portion of the feed during the fattening phase of XFG can effectively sustain their production performance, optimize the gut microbial community and morphometrical traits, provide new insight into using non-conventional feed resources to reduce feed cost and improve economic benefits in the breeding industry.
- Open Access
- 4 December 2023
- Published by MDPI AG in Agriculture
- Vol. 13 (12) , 2239
Regulation of Inorganic Zinc Supplementation on Intestinal Absorption, Metabolism, and Muscle Development in Broilers Fed Low-Protein Diets
The issue of nitrogen fertilizer contamination resulting from high-protein diets can be effectively solved by adopting low-protein diets. The objective of this study was to investigate the effects of inorganic zinc supplementation in low-protein diets on 42-day-old broilers across a multitude of parameters. To determine the optimal dose of inorganic zinc in broiler diets with a 1.5% reduction in crude protein, 1-day-old Arbor Acres broilers (n = 270) were randomly assigned to five groups, each containing 54 broilers. Our results revealed that inorganic zinc supplementation at levels of 130 mg/kg elevated growth performance and carcass traits (p < 0.05). It also significantly increased the ratio of intestinal villi heights to crypt depths (p < 0.001), changed intestinal morphology, and significantly increased albumin content in serum (p < 0.05). Furthermore, analysis of mRNA expression showed that 130 mg/kg and 150 mg/kg of inorganic zinc improved the myogenic differentiation involved in muscle development, as well as intestinal tight junction and liver metallothionein capacity (p < 0.001). Additionally, these groups exhibited lower zinc excretion compared with other treatments (p < 0.001). In summary, our findings suggest that inorganic zinc supplementation in low-protein diets holds the potential to support muscle and intestinal development in broilers, presenting a viable nutritional strategy.
- 4 December 2023
- Published by MDPI AG in Agriculture
- Vol. 13 (12) , 2239
Open AccessRegulation of Inorganic Zinc Supplementation on Intestinal Absorption, Metabolism, and Muscle Development in Broilers Fed Low-Protein Diets
The issue of nitrogen fertilizer contamination resulting from high-protein diets can be effectively solved by adopting low-protein diets. The objective of this study was to investigate the effects of inorganic zinc supplementation in low-protein diets on 42-day-old broilers across a multitude of parameters. To determine the optimal dose of inorganic zinc in broiler diets with a 1.5% reduction in crude protein, 1-day-old Arbor Acres broilers (n = 270) were randomly assigned to five groups, each containing 54 broilers. Our results revealed that inorganic zinc supplementation at levels of 130 mg/kg elevated growth performance and carcass traits (p < 0.05). It also significantly increased the ratio of intestinal villi heights to crypt depths (p < 0.001), changed intestinal morphology, and significantly increased albumin content in serum (p < 0.05). Furthermore, analysis of mRNA expression showed that 130 mg/kg and 150 mg/kg of inorganic zinc improved the myogenic differentiation involved in muscle development, as well as intestinal tight junction and liver metallothionein capacity (p < 0.001). Additionally, these groups exhibited lower zinc excretion compared with other treatments (p < 0.001). In summary, our findings suggest that inorganic zinc supplementation in low-protein diets holds the potential to support muscle and intestinal development in broilers, presenting a viable nutritional strategy.
- Open Access
Effects of Compound Chinese Herbal Medicine Additive on Growth Performance and Gut Microbiota Diversity of Zi Goose
This study investigated the effects of CCHMA on growth performance, slaughter performance, serum biochemical indicators, intestinal morphology and microbiota of Zi goose. Initially, it was determined the optimal addition concentration of CCHMA to be 3 g/kg by the first feeding experiment. Then, 78 Zi geese were divided into control and CCHMA supplemented groups. The results showed that the body weight (BW) and average daily gain (ADG) of the CCHMA supplemented group was significantly increased (p < 0.05), and the feed/gain (F/G) of the CCHMA supplemented group was significantly decreased (p < 0.05) compared with the control group. The dressed yield percentage in the CCHMA supplemented group significantly increased by 0.78% (p < 0.05). Alanine aminotransferase (ALT) and aspartate aminotransferase (AST) levels were significantly lower in the CCHMA fed birds than in the control group (p < 0.05). Further, 16S rDNA gene sequencing conducted for cecal flora composition found that 3 g/kg CCHMA significantly increased the abundance of beneficial bacteria (CHKCI001, Colidextribacter and Subdoligranulum) (p < 0.05; p < 0.01) and suppressing harmful bacteria (Bacteroidetes and Methanobrevibacter) (p < 0.05) in the cecum of Zi goose. In conclusion, adding 3 g/kg of CCHMA in the diet can improve the growth performance, slaughter performance of Zi goose, and optimize the cecum microflora.
Open AccessEffects of Compound Chinese Herbal Medicine Additive on Growth Performance and Gut Microbiota Diversity of Zi Goose
This study investigated the effects of CCHMA on growth performance, slaughter performance, serum biochemical indicators, intestinal morphology and microbiota of Zi goose. Initially, it was determined the optimal addition concentration of CCHMA to be 3 g/kg by the first feeding experiment. Then, 78 Zi geese were divided into control and CCHMA supplemented groups. The results showed that the body weight (BW) and average daily gain (ADG) of the CCHMA supplemented group was significantly increased (p < 0.05), and the feed/gain (F/G) of the CCHMA supplemented group was significantly decreased (p < 0.05) compared with the control group. The dressed yield percentage in the CCHMA supplemented group significantly increased by 0.78% (p < 0.05). Alanine aminotransferase (ALT) and aspartate aminotransferase (AST) levels were significantly lower in the CCHMA fed birds than in the control group (p < 0.05). Further, 16S rDNA gene sequencing conducted for cecal flora composition found that 3 g/kg CCHMA significantly increased the abundance of beneficial bacteria (CHKCI001, Colidextribacter and Subdoligranulum) (p < 0.05; p < 0.01) and suppressing harmful bacteria (Bacteroidetes and Methanobrevibacter) (p < 0.05) in the cecum of Zi goose. In conclusion, adding 3 g/kg of CCHMA in the diet can improve the growth performance, slaughter performance of Zi goose, and optimize the cecum microflora.
- Open Access
Comparative Analyses of Production Performance, Meat Quality, and Gut Microbial Composition between Two Chinese Goose Breeds
Goose meat is consumed by consumers because it contains a relatively high proportion of polyunsaturated fatty acids (PUFAs). This study was conducted to explore the main differences in production performance, breast meat quality traits, and cecal microbiota compositions between the Zi goose (ZG) and Xianghai flying goose (FG). The production performance and breast meat quality trait analyses showed that compared with the ZG, the FG had a higher right breast muscle index, ileum villi height/crypt depth ratio (VH/CD), and cecum fermentation rate (higher short-chain fatty acid (SFCA) concentration); a lower abdominal fat index; a higher proportion of PUFAs; and a lower shear force. Spearman’s correlation coefficients between the cecal microbiota composition and production performance indexes suggested that the genus Faecalibacterium was positively associated with production performance; in contrast, the genus Candidatus Saccharimonas was negatively correlated with production performance; moreover, the Ruminococcus torques group, Parasutterella, and Methanobrevibacter were negatively related to the VH/CD. Taken together, in this particular trial, FG had better production performance, healthier meat quality traits, and better intestinal digestion and absorption capacities than ZG. These results not only provide a useful data reference for the production of healthy geese for human consumption but can also help guide the utilization of goose breed resources.
Open AccessComparative Analyses of Production Performance, Meat Quality, and Gut Microbial Composition between Two Chinese Goose Breeds
Goose meat is consumed by consumers because it contains a relatively high proportion of polyunsaturated fatty acids (PUFAs). This study was conducted to explore the main differences in production performance, breast meat quality traits, and cecal microbiota compositions between the Zi goose (ZG) and Xianghai flying goose (FG). The production performance and breast meat quality trait analyses showed that compared with the ZG, the FG had a higher right breast muscle index, ileum villi height/crypt depth ratio (VH/CD), and cecum fermentation rate (higher short-chain fatty acid (SFCA) concentration); a lower abdominal fat index; a higher proportion of PUFAs; and a lower shear force. Spearman’s correlation coefficients between the cecal microbiota composition and production performance indexes suggested that the genus Faecalibacterium was positively associated with production performance; in contrast, the genus Candidatus Saccharimonas was negatively correlated with production performance; moreover, the Ruminococcus torques group, Parasutterella, and Methanobrevibacter were negatively related to the VH/CD. Taken together, in this particular trial, FG had better production performance, healthier meat quality traits, and better intestinal digestion and absorption capacities than ZG. These results not only provide a useful data reference for the production of healthy geese for human consumption but can also help guide the utilization of goose breed resources.
- Open Access
- 11 April 2022
- Published by Frontiers Media SA in Frontiers in Genetics
- Vol. 13, 868717
Transcriptome Analysis of the Liver and Muscle Tissues of Dorper and Small-Tailed Han Sheep
It is well known that Dorper (DP) is a full-bodied, fast-growing and high dressing percentage breed, while the production performance of Small-tailed Han sheep (STH) is not so excellent, in contrast to DP. Therefore, in this study, a comparative transcriptomic analysis of liver and muscle tissues from DP and STH breeds was carried out to find differentially expressed genes (DEGs) that affect their growth and meat quality traits. The results showed that the total number of DEGs was 2,188 in the two tissues. There were 950, 160 up-regulated and 1,007, 71 down-regulated genes in the liver and muscle, respectively. Several DEGs such as TGFB1, TGFB3, FABP3, LPL may be associated with growth and development in DP. Also, several GO terms were found to be associated with muscle growth and development, such as developmental growth (GO:0048589), and myofibril (GO:0030016). Further validation of eight genes (6 up-regulated, and 2 down-regulated) was performed using quantitative RT-PCR. These findings will provide valuable information for studying growth and development as well as meat quality traits in sheep.
- 11 April 2022
- Published by Frontiers Media SA in Frontiers in Genetics
- Vol. 13, 868717
Open AccessTranscriptome Analysis of the Liver and Muscle Tissues of Dorper and Small-Tailed Han Sheep
It is well known that Dorper (DP) is a full-bodied, fast-growing and high dressing percentage breed, while the production performance of Small-tailed Han sheep (STH) is not so excellent, in contrast to DP. Therefore, in this study, a comparative transcriptomic analysis of liver and muscle tissues from DP and STH breeds was carried out to find differentially expressed genes (DEGs) that affect their growth and meat quality traits. The results showed that the total number of DEGs was 2,188 in the two tissues. There were 950, 160 up-regulated and 1,007, 71 down-regulated genes in the liver and muscle, respectively. Several DEGs such as TGFB1, TGFB3, FABP3, LPL may be associated with growth and development in DP. Also, several GO terms were found to be associated with muscle growth and development, such as developmental growth (GO:0048589), and myofibril (GO:0030016). Further validation of eight genes (6 up-regulated, and 2 down-regulated) was performed using quantitative RT-PCR. These findings will provide valuable information for studying growth and development as well as meat quality traits in sheep.
- Open Access
- 2 January 2019
- Published by Taylor & Francis in Mitochondrial DNA Part B
- Vol. 4 (1) , 141-142
Complete mitochondrial genome of Dendrocopos canicapillus (Piciformes: Picidae)
The grey-capped woodpecker (Dendrocopos canicapillus) is one species of family Picidae. In this study, the complete mitochondrial genome of D. canicapillus was determined and annotated for the first time. It is a circular molecule of 16,843 bp in size and contains 13 protein-coding genes (PCGs), 2 rRNA genes, 22 tRNA genes, and 2 control regions. The total base composition is 28.28% for A, 24.47% for T, 33.39% for C and 13.85% for G, respectively. A phylogenetic tree based on the DNA data of 13 PCGs using Neighbour Joining method was constructed to provide phylogenetic relationship between D. canicapillus and other species of Picidae.
- 2 January 2019
- Published by Taylor & Francis in Mitochondrial DNA Part B
- Vol. 4 (1) , 141-142
Open AccessComplete mitochondrial genome of Dendrocopos canicapillus (Piciformes: Picidae)
The grey-capped woodpecker (Dendrocopos canicapillus) is one species of family Picidae. In this study, the complete mitochondrial genome of D. canicapillus was determined and annotated for the first time. It is a circular molecule of 16,843 bp in size and contains 13 protein-coding genes (PCGs), 2 rRNA genes, 22 tRNA genes, and 2 control regions. The total base composition is 28.28% for A, 24.47% for T, 33.39% for C and 13.85% for G, respectively. A phylogenetic tree based on the DNA data of 13 PCGs using Neighbour Joining method was constructed to provide phylogenetic relationship between D. canicapillus and other species of Picidae.
- 1 January 2016
- Published by Genetics and Molecular Research in Genetics and Molecular Research
- Vol. 15 (1)
De novo assembly and characterization of farmed blue fox (Alopex lagopus) global transcriptome using Illumina paired-end sequencing
The blue fox (Alopex lagopus), a coat-color variant of the Arctic fox, is a domesticated fur-bearing mammal. In the present study, transcriptome data generated from a pool of nine different tissues were obtained with Illumina HiSeq2500 paired-end sequencing technology. After filtering from raw reads, 32,358,290 clean reads were assembled into 161,269 transcripts and 97,252 unigenes by the Trinity fragment assembly software. Of the assembled unigenes, 37,967 were annotated in the National Center for Biotechnology Information (NCBI) Non-Redundant (NR) protein database and 26,264 in the Swiss-Prot database. Among the annotated unigenes, 24,839 and 24,267 were assigned using the Gene Ontology (GO) and euKaryotic Orthologous Groups (KOG) databases, respectively. Altogether, 17,057 unigenes were mapped onto 227 pathways using the Kyoto Encyclopedia of Genes and Genomes database. In addition, 6394 simple sequence repeats were identified by examining 12,965 unigenes (>1 kb), which could contribute to the development of molecular markers. This study generated transcriptome data for the blue fox that will promote further progress in expression profiling studies, and provide a good annotation basis for genomic studies.
- 1 January 2016
- Published by Genetics and Molecular Research in Genetics and Molecular Research
- Vol. 15 (1)
De novo assembly and characterization of farmed blue fox (Alopex lagopus) global transcriptome using Illumina paired-end sequencing
The blue fox (Alopex lagopus), a coat-color variant of the Arctic fox, is a domesticated fur-bearing mammal. In the present study, transcriptome data generated from a pool of nine different tissues were obtained with Illumina HiSeq2500 paired-end sequencing technology. After filtering from raw reads, 32,358,290 clean reads were assembled into 161,269 transcripts and 97,252 unigenes by the Trinity fragment assembly software. Of the assembled unigenes, 37,967 were annotated in the National Center for Biotechnology Information (NCBI) Non-Redundant (NR) protein database and 26,264 in the Swiss-Prot database. Among the annotated unigenes, 24,839 and 24,267 were assigned using the Gene Ontology (GO) and euKaryotic Orthologous Groups (KOG) databases, respectively. Altogether, 17,057 unigenes were mapped onto 227 pathways using the Kyoto Encyclopedia of Genes and Genomes database. In addition, 6394 simple sequence repeats were identified by examining 12,965 unigenes (>1 kb), which could contribute to the development of molecular markers. This study generated transcriptome data for the blue fox that will promote further progress in expression profiling studies, and provide a good annotation basis for genomic studies.
- 28 January 2015
- Published by Taylor & Francis in Mitochondrial DNA Part A
- Vol. 27 (6) , 4095-4096
The complete sequence of the mitochondrial genome of Arctic fox (Alopex lagopus)
In the present study, the complete mitochondrial genome sequence of Arctic fox (Alopex lagopus) was determined for the first time. It has a total length of 16,656 bp, and contains 13 protein-coding genes, 22 tRNA genes, 2 ribosome RNA genes and 1 control region. The nucleotide composition is 31.3% for A, 26.2% for C, 14.8% for G and 27.7% for T, respectively. The D-loop region located between tRNAPro and tRNAPhe contains a (ACACGTACACGCAT)18 tandem repeat array. The data will be useful for the investigation of the genetic structure and diversity in the natural and farmed population of Arctic foxes.
- 28 January 2015
- Published by Taylor & Francis in Mitochondrial DNA Part A
- Vol. 27 (6) , 4095-4096
The complete sequence of the mitochondrial genome of Arctic fox (Alopex lagopus)
In the present study, the complete mitochondrial genome sequence of Arctic fox (Alopex lagopus) was determined for the first time. It has a total length of 16,656 bp, and contains 13 protein-coding genes, 22 tRNA genes, 2 ribosome RNA genes and 1 control region. The nucleotide composition is 31.3% for A, 26.2% for C, 14.8% for G and 27.7% for T, respectively. The D-loop region located between tRNAPro and tRNAPhe contains a (ACACGTACACGCAT)18 tandem repeat array. The data will be useful for the investigation of the genetic structure and diversity in the natural and farmed population of Arctic foxes.
- 1 February 2014
- Published by Springer Nature in Molecular Biology Reports
- Vol. 41 (5) , 3245-3256
Differential expression of the melanocortin-4 receptor in male and female C57BL/6J mice
- 1 February 2014
- Published by Springer Nature in Molecular Biology Reports
- Vol. 41 (5) , 3245-3256
Differential expression of the melanocortin-4 receptor in male and female C57BL/6J mice