Layla Martin-Samos
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Layla Martin-Samos has a total of 77 co-authors. Here are the top co-authors by number of shared publications:
- Anne Hemeryck
LAAS-CNRS, Université de Toulouse, CNRS, 31400 Toulouse, France
8 shared publications - Nicolas Richard
CEA, DAM, DIF, Arpajon, France
6 shared publications - Nicolas Salles
CNR-IOM/Democritos National Simulation Center, Istituto Officina dei Materiali 2 , c/o SISSA, via Bonomea 265, IT-34136 Trieste, Italy
6 shared publications - Gabriela Herrero-Saboya
Istituto Officina dei Materiali
5 shared publications - Luigi Giacomazzi
CNR-IOM/Democritos National Simulation Center, Istituto Officina dei Materiali, c/o SISSA, via Bonomea 265, IT-34136 Trieste, Italy
5 shared publications - Matjaz Valant
University of Nova Gorica
5 shared publications
Latest Publications
- Open Access
- 25 October 2025
- Published by Wiley in Physica Status Solidi (a)
- Vol. 223 (2)
Identification of Paramagnetic Centers in Irradiated F‐Doped Silica by First‐Principle Calculations
Although fluorine is one of the most important dopants of silica, for several decades fluorine‐related paramagnetic defects have been very elusive. Yet, a recent experimental investigation [L. Skuja et al. Phys. Rev. Lett. 131 , 256 903 (2023)] has claimed the identification of a new paramagnetic center, that is, the E′(F) center, responsible for a 10.5 mT hyperfine doublet in irradiated F‐doped silica glass. Due to the lack of theoretical investigations, the reliability of the assignment proposed for the E′(F) has been under debate so far. In this work two alternative structural models, here labeled as the 2fSiF and models, are investigated and discussed by means of first‐principle calculations of electron paramagnetic resonance parameters, and further evidence in favor of the 2fSi‐F model is provided. The latter consists of a threefold‐coordinated Si atom, which is bonded to two bridging oxygen atoms and to one fluorine atom and that features an unpaired electron in an sp 3 orbital. Furthermore, through first‐principles nudged elastic band calculations it is shown that, under irradiation, generation mechanisms involving an interconversion between and E′(F) centers can occur, with no need for precursors like the tetrahedral unit SiO 2 F 2 or twofold Si centers.
- 25 October 2025
- Published by Wiley in Physica Status Solidi (a)
- Vol. 223 (2)
Open AccessIdentification of Paramagnetic Centers in Irradiated F‐Doped Silica by First‐Principle Calculations
Although fluorine is one of the most important dopants of silica, for several decades fluorine‐related paramagnetic defects have been very elusive. Yet, a recent experimental investigation [L. Skuja et al. Phys. Rev. Lett. 131 , 256 903 (2023)] has claimed the identification of a new paramagnetic center, that is, the E′(F) center, responsible for a 10.5 mT hyperfine doublet in irradiated F‐doped silica glass. Due to the lack of theoretical investigations, the reliability of the assignment proposed for the E′(F) has been under debate so far. In this work two alternative structural models, here labeled as the 2fSiF and models, are investigated and discussed by means of first‐principle calculations of electron paramagnetic resonance parameters, and further evidence in favor of the 2fSi‐F model is provided. The latter consists of a threefold‐coordinated Si atom, which is bonded to two bridging oxygen atoms and to one fluorine atom and that features an unpaired electron in an sp 3 orbital. Furthermore, through first‐principles nudged elastic band calculations it is shown that, under irradiation, generation mechanisms involving an interconversion between and E′(F) centers can occur, with no need for precursors like the tetrahedral unit SiO 2 F 2 or twofold Si centers.
- Open Access
- 2 October 2024
- Published by American Chemical Society (ACS) in ChemRxiv
NONCONDUCTIVE FERROFLUIDS FROM PERMANENTLY MAGNETIC NANOPLATELETS HYBRIDIZED WITH POLAR PHOSPHONIC LIGANDS
Stable ferrofluids of permanently magnetic nanoplatelets of barium hexaferrite (BHF NPLs) in 1-hexanol were obtained using phosphonic acid- and phosphonate ester-based polar ligands. These ligands with the different electron-withdrawing groups and alkyl chain lengths of the terminal chain and linker were synthesized. Their attachment to the surface of the BHF NPLs was studied for various conditions and followed by a combination of spectroscopic techniques, thermogravimetry, and electrokinetic measurements. The results confirmed the theoretically predicted surface condensation of the ligands onto the BHF NPLs surfaces at 120 °C in 1-hexanol, whereas at lower temperatures or in more polar solvents the ligands were mostly physisorbed. The NPL hybrids with chemisorbed ligands having surface densities of at least 0.4 molecules/nm2 formed stable ferrofluids in 1-hexanol. The hybridization of the BHF NPLs via the condensation reaction in 1-hexanol creates sufficient steric-solvation repulsion to overcome the magnetic dipolar attraction between the NPLs and stabilizes the NPLs in 1-hexanol. Due to the relatively low polarity of 1-hexanol, the ligands remain protonated and the ferrofluids have negligible electric conductivity. In addition, an increase in the saturation magnetization of such hybrid BHF NPLs was correlated with their superior sensitivity to a magnetic field compared to the core NPLs. The ferrofluids can be exploited for the development of novel magneto-optic sensors that can operate under an electric field.
- 2 October 2024
- Published by American Chemical Society (ACS) in ChemRxiv
Open AccessNONCONDUCTIVE FERROFLUIDS FROM PERMANENTLY MAGNETIC NANOPLATELETS HYBRIDIZED WITH POLAR PHOSPHONIC LIGANDS
Stable ferrofluids of permanently magnetic nanoplatelets of barium hexaferrite (BHF NPLs) in 1-hexanol were obtained using phosphonic acid- and phosphonate ester-based polar ligands. These ligands with the different electron-withdrawing groups and alkyl chain lengths of the terminal chain and linker were synthesized. Their attachment to the surface of the BHF NPLs was studied for various conditions and followed by a combination of spectroscopic techniques, thermogravimetry, and electrokinetic measurements. The results confirmed the theoretically predicted surface condensation of the ligands onto the BHF NPLs surfaces at 120 °C in 1-hexanol, whereas at lower temperatures or in more polar solvents the ligands were mostly physisorbed. The NPL hybrids with chemisorbed ligands having surface densities of at least 0.4 molecules/nm2 formed stable ferrofluids in 1-hexanol. The hybridization of the BHF NPLs via the condensation reaction in 1-hexanol creates sufficient steric-solvation repulsion to overcome the magnetic dipolar attraction between the NPLs and stabilizes the NPLs in 1-hexanol. Due to the relatively low polarity of 1-hexanol, the ligands remain protonated and the ferrofluids have negligible electric conductivity. In addition, an increase in the saturation magnetization of such hybrid BHF NPLs was correlated with their superior sensitivity to a magnetic field compared to the core NPLs. The ferrofluids can be exploited for the development of novel magneto-optic sensors that can operate under an electric field.
- 12 August 2024
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 161 (6)
SOFI: Finding point group symmetries in atomic clusters as finding the set of degenerate solutions in a shape-matching problem
Point Group (PG) symmetries play a fundamental role in many aspects of theoretical chemistry and computational materials science. With the objective to automatize the search of PG symmetry operations of generic atomic clusters, we present a new algorithm called Symmetry Operation FInder (SOFI). SOFI addresses the problem of identifying PG symmetry by framing it as a degenerate shape-matching problem, where the multiple solutions correspond to distinct symmetry operations. The developed algorithm is compared against three other algorithms dedicated to PG identification on a large set of atomic clusters. The results, along with some illustrative use cases, showcase the effectiveness of SOFI. The SOFI algorithm is released as part of the iterative rotations and assignments library, accessible at https://github.com/mammasmias/IterativeRotationsAssignments.
- 12 August 2024
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 161 (6)
SOFI: Finding point group symmetries in atomic clusters as finding the set of degenerate solutions in a shape-matching problem
Point Group (PG) symmetries play a fundamental role in many aspects of theoretical chemistry and computational materials science. With the objective to automatize the search of PG symmetry operations of generic atomic clusters, we present a new algorithm called Symmetry Operation FInder (SOFI). SOFI addresses the problem of identifying PG symmetry by framing it as a degenerate shape-matching problem, where the multiple solutions correspond to distinct symmetry operations. The developed algorithm is compared against three other algorithms dedicated to PG identification on a large set of atomic clusters. The results, along with some illustrative use cases, showcase the effectiveness of SOFI. The SOFI algorithm is released as part of the iterative rotations and assignments library, accessible at https://github.com/mammasmias/IterativeRotationsAssignments.
- 17 June 2024
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 160 (23)
Exploring potential energy surfaces to reach saddle points above convex regions
Saddle points on high-dimensional potential energy surfaces (PES) play a determining role in the activated dynamics of molecules and materials. Building on approaches dating back more than 50 years, many open-ended transition-state search methods have been developed to follow the direction of negative curvature from a local minimum to an adjacent first-order saddle point. Despite the mathematical justification, these methods can display a high failure rate: using small deformation steps, up to 80% of the explorations can end up in a convex region of the PES, where all directions of negative curvature vanish, while if the deformation is aggressive, a similar fraction of attempts lead to saddle points that are not directly connected to the initial minimum. In high-dimension PES, these reproducible failures were thought to only increase the overall computational cost, without having any effect on the methods’ capacity to find all saddle points surrounding a minimum. Using activation-relaxation technique nouveau (ARTn), we characterize the nature of the PES around minima, considerably expanding on previous knowledge. We show that convex regions can lie on activation pathways and that not exploring beyond them can introduce significant bias in the saddle-point search. We introduce an efficient approach for traversing the convex regions, almost eliminating exploration failures, while multiplying by almost 10 the number of identified unique and connected saddle points as compared to the standard ARTn, thus underlining the importance of correctly handling convex regions for completeness of saddle point explorations.
- 17 June 2024
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 160 (23)
Exploring potential energy surfaces to reach saddle points above convex regions
Saddle points on high-dimensional potential energy surfaces (PES) play a determining role in the activated dynamics of molecules and materials. Building on approaches dating back more than 50 years, many open-ended transition-state search methods have been developed to follow the direction of negative curvature from a local minimum to an adjacent first-order saddle point. Despite the mathematical justification, these methods can display a high failure rate: using small deformation steps, up to 80% of the explorations can end up in a convex region of the PES, where all directions of negative curvature vanish, while if the deformation is aggressive, a similar fraction of attempts lead to saddle points that are not directly connected to the initial minimum. In high-dimension PES, these reproducible failures were thought to only increase the overall computational cost, without having any effect on the methods’ capacity to find all saddle points surrounding a minimum. Using activation-relaxation technique nouveau (ARTn), we characterize the nature of the PES around minima, considerably expanding on previous knowledge. We show that convex regions can lie on activation pathways and that not exploring beyond them can introduce significant bias in the saddle-point search. We introduce an efficient approach for traversing the convex regions, almost eliminating exploration failures, while multiplying by almost 10 the number of identified unique and connected saddle points as compared to the standard ARTn, thus underlining the importance of correctly handling convex regions for completeness of saddle point explorations.
- 29 February 2024
- Published by Springer Nature
- p. 162-173
A* Search Algorithm for an Optimal Investment Problem in Vehicle-Sharing Systems
- 29 February 2024
- Published by Springer Nature
- p. 162-173
A* Search Algorithm for an Optimal Investment Problem in Vehicle-Sharing Systems
- Open Access
- 21 July 2023
- Published by MDPI AG in Nanomaterials
- Vol. 13 (14) , 2123
Deep Levels and Electron Paramagnetic Resonance Parameters of Substitutional Nitrogen in Silicon from First Principles
Nitrogen is commonly implanted in silicon to suppress the diffusion of self-interstitials and the formation of voids through the creation of nitrogen–vacancy complexes and nitrogen–nitrogen pairs. Yet, identifying a specific N-related defect via spectroscopic means has proven to be non-trivial. Activation energies obtained from deep-level transient spectroscopy are often assigned to a subset of possible defects that include non-equivalent atomic structures, such as the substitutional nitrogen and the nitrogen–vacancy complex. Paramagnetic N-related defects were the object of several electron paramagnetic spectroscopy investigations which assigned the so-called SL5 signal to the presence of substitutional nitrogen (N). Nevertheless, its behaviour at finite temperatures has been imprecisely linked to the metastability of the N center. In this work, we build upon the robust identification of the SL5 signature and we establish a theoretical picture of the substitutional nitrogen. Through an understanding of its symmetry-breaking mechanism, we provide a model of its fundamental physical properties (e.g., its energy landscape) based on ab initio calculations. Moreover by including more refined density functional theory-based approaches, we calculate EPR parameters ( and tensors), elucidating the debate on the metastability of N. Finally, by computing thermodynamic charge transition levels within the GW method, we present reference values for the donor and acceptor levels of N.- 21 July 2023
- Published by MDPI AG in Nanomaterials
- Vol. 13 (14) , 2123
Open AccessDeep Levels and Electron Paramagnetic Resonance Parameters of Substitutional Nitrogen in Silicon from First Principles
Nitrogen is commonly implanted in silicon to suppress the diffusion of self-interstitials and the formation of voids through the creation of nitrogen–vacancy complexes and nitrogen–nitrogen pairs. Yet, identifying a specific N-related defect via spectroscopic means has proven to be non-trivial. Activation energies obtained from deep-level transient spectroscopy are often assigned to a subset of possible defects that include non-equivalent atomic structures, such as the substitutional nitrogen and the nitrogen–vacancy complex. Paramagnetic N-related defects were the object of several electron paramagnetic spectroscopy investigations which assigned the so-called SL5 signal to the presence of substitutional nitrogen (N). Nevertheless, its behaviour at finite temperatures has been imprecisely linked to the metastability of the N center. In this work, we build upon the robust identification of the SL5 signature and we establish a theoretical picture of the substitutional nitrogen. Through an understanding of its symmetry-breaking mechanism, we provide a model of its fundamental physical properties (e.g., its energy landscape) based on ab initio calculations. Moreover by including more refined density functional theory-based approaches, we calculate EPR parameters ( and tensors), elucidating the debate on the metastability of N. Finally, by computing thermodynamic charge transition levels within the GW method, we present reference values for the donor and acceptor levels of N. - Open Access
- 8 June 2023
- Published by MDPI AG in Nanomaterials
- Vol. 13 (12) , 1822
The Influence of Catechols on the Magnetization of Iron Oxide Nanoparticles
In this study, MNPs were functionalized with pyrocatechol (CAT), pyrogallol (GAL), caffeic acid (CAF), and nitrodopamine (NDA) at pH 8 and pH 11. The functionalization of the MNPs was successful, except in the case of NDA at pH 11. The thermogravimetric analyses indicated that the surface concentration of the catechols was between 1.5 and 3.6 molecules/nm2. The saturation magnetizations (Ms) of the functionalized MNPs were higher than the starting material. XPS analyses showed only the presence of Fe(III) ions on the surface, thus refuting the idea of the Fe being reduced and magnetite being formed on the surfaces of the MNPs. Density functional theory (DFT) calculations were performed for two modes of adsorption of CAT onto two model surfaces: plain and adsorption via condensation. The total magnetization of both adsorption modes remained the same, indicating that the adsorption of the catechols does not affect the Ms. The analyses of the size and the size distribution showed an increase in the average size of the MNPs during the functionalization process. This increase in the average size of the MNPs and the reduction in the fraction of the smallest (i.e., s values.
- 8 June 2023
- Published by MDPI AG in Nanomaterials
- Vol. 13 (12) , 1822
Open AccessThe Influence of Catechols on the Magnetization of Iron Oxide Nanoparticles
In this study, MNPs were functionalized with pyrocatechol (CAT), pyrogallol (GAL), caffeic acid (CAF), and nitrodopamine (NDA) at pH 8 and pH 11. The functionalization of the MNPs was successful, except in the case of NDA at pH 11. The thermogravimetric analyses indicated that the surface concentration of the catechols was between 1.5 and 3.6 molecules/nm2. The saturation magnetizations (Ms) of the functionalized MNPs were higher than the starting material. XPS analyses showed only the presence of Fe(III) ions on the surface, thus refuting the idea of the Fe being reduced and magnetite being formed on the surfaces of the MNPs. Density functional theory (DFT) calculations were performed for two modes of adsorption of CAT onto two model surfaces: plain and adsorption via condensation. The total magnetization of both adsorption modes remained the same, indicating that the adsorption of the catechols does not affect the Ms. The analyses of the size and the size distribution showed an increase in the average size of the MNPs during the functionalization process. This increase in the average size of the MNPs and the reduction in the fraction of the smallest (i.e., s values.
- Open Access
- 13 April 2022
- Published by MDPI AG in Applied Sciences
- Vol. 12 (8) , 3916
O2 Loaded Germanosilicate Optical Fibers: Experimental In Situ Investigation and Ab Initio Simulation Study of GLPC Evolution under Irradiation
In this work we present a combined experimental and ab initio simulation investigation concerning the Germanium Lone Pair Center (GLPC), its interaction with molecular oxygen (O2), and evolution under irradiation. First, O2 loading has been applied here to Ge-doped optical fibers to reduce the concentration of GLPC point defects. Next, by means of cathodoluminescence in situ experiments, we found evidence that the 10 keV electron irradiation of the treated optical fibers induces the generation of GLPC centers, while in nonloaded optical fibers, the irradiation causes the bleaching of the pre-existing GLPC. Ab initio calculations were performed to investigate the reaction of the GLPC with molecular oxygen. Such investigations suggested the stability of the dioxagermirane (DIOG) bulk defect, and its back conversion into GLPC with a local release of O2 under irradiation. Furthermore, it is also inferred that a remarkable portion of the O2 passivated GLPC may form Ge tetrahedra connected to peroxy bridges. Such structures may have a larger resistance to the irradiation and not be back converted into GLPC.
- 13 April 2022
- Published by MDPI AG in Applied Sciences
- Vol. 12 (8) , 3916
Open AccessO2 Loaded Germanosilicate Optical Fibers: Experimental In Situ Investigation and Ab Initio Simulation Study of GLPC Evolution under Irradiation
In this work we present a combined experimental and ab initio simulation investigation concerning the Germanium Lone Pair Center (GLPC), its interaction with molecular oxygen (O2), and evolution under irradiation. First, O2 loading has been applied here to Ge-doped optical fibers to reduce the concentration of GLPC point defects. Next, by means of cathodoluminescence in situ experiments, we found evidence that the 10 keV electron irradiation of the treated optical fibers induces the generation of GLPC centers, while in nonloaded optical fibers, the irradiation causes the bleaching of the pre-existing GLPC. Ab initio calculations were performed to investigate the reaction of the GLPC with molecular oxygen. Such investigations suggested the stability of the dioxagermirane (DIOG) bulk defect, and its back conversion into GLPC with a local release of O2 under irradiation. Furthermore, it is also inferred that a remarkable portion of the O2 passivated GLPC may form Ge tetrahedra connected to peroxy bridges. Such structures may have a larger resistance to the irradiation and not be back converted into GLPC.
- 12 April 2022
- Published by Elsevier in Computational Materials Science
- Vol. 209
Activation–Relaxation Technique: An efficient way to find minima and saddle points of potential energy surfaces
- 12 April 2022
- Published by Elsevier in Computational Materials Science
- Vol. 209
Activation–Relaxation Technique: An efficient way to find minima and saddle points of potential energy surfaces