David R. Vann
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
David R. Vann has a total of 47 co-authors. Here are the top co-authors by number of shared publications:
- Corrie Saux Moreau
Department of Entomology Cornell University Ithaca New York USA
3 shared publications - Jacob A. Russell
Department of Biology Drexel University Philadelphia Pennsylvania USA
3 shared publications - John S. Millar
Department of Medicine, Institute of Diabetes, Obesity and Metabolism, University of Pennsylvania, Philadelphia, PA, 19104, USA
3 shared publications - Jon G. Sanders
Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, USA
3 shared publications - Naomi E. Pierce
Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA
3 shared publications - Piotr Łukasik
Jagiellonian University
3 shared publications
Latest Publications
- Open Access
- 4 November 2024
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 121 (47)
Soft matter mechanics of baseball’s Rubbing Mud
Researchers looking for sustainable materials with optimal mechanical properties may draw inspiration from a baseball tradition. For nearly 100 y, a mysterious mud harvested from an undisclosed river site in New Jersey (USA) has been the agent of choice in the USA’s Major League Baseball for “de-glossing” new baseballs. It is unclear, however, what makes this “Rubbing Mud” work. Here, we perform a multiscale investigation of the rheology and tribology of this mud material under baseball-relevant conditions and identify three mechanisms by which the mud alters the surface properties of the baseball. First, the mud creates a more uniform baseball surface by filling in pores in the leather; this is possible because of its relatively high cohesion (clays and organics) making the material remarkably shear thinning. Second, the residue of cohesive particles coating the baseball effectively doubles contact adhesion. Third, a sparse population of angular sand grains are bonded to the baseball by clay-sized particles, leaving a studded surface that enhances friction. The proportions of cohesive, frictional, and viscous elements in Rubbing Mud conspire to create a soft material with an unusual mix of properties, that could find other applications in the development of sustainable geomaterials. Our improved understanding of the flow and friction of natural muds may also find use in modeling natural hazards such as mudslides and for locomotion in muddy environments.
- 4 November 2024
- Published by National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 121 (47)
Open AccessSoft matter mechanics of baseball’s Rubbing Mud
Researchers looking for sustainable materials with optimal mechanical properties may draw inspiration from a baseball tradition. For nearly 100 y, a mysterious mud harvested from an undisclosed river site in New Jersey (USA) has been the agent of choice in the USA’s Major League Baseball for “de-glossing” new baseballs. It is unclear, however, what makes this “Rubbing Mud” work. Here, we perform a multiscale investigation of the rheology and tribology of this mud material under baseball-relevant conditions and identify three mechanisms by which the mud alters the surface properties of the baseball. First, the mud creates a more uniform baseball surface by filling in pores in the leather; this is possible because of its relatively high cohesion (clays and organics) making the material remarkably shear thinning. Second, the residue of cohesive particles coating the baseball effectively doubles contact adhesion. Third, a sparse population of angular sand grains are bonded to the baseball by clay-sized particles, leaving a studded surface that enhances friction. The proportions of cohesive, frictional, and viscous elements in Rubbing Mud conspire to create a soft material with an unusual mix of properties, that could find other applications in the development of sustainable geomaterials. Our improved understanding of the flow and friction of natural muds may also find use in modeling natural hazards such as mudslides and for locomotion in muddy environments.
- Open Access
- 17 June 2024
- Published by MDPI AG in Biomimetics
- Vol. 9 (6) , 365
Effect of Zeolite Incorporation on the Ion Release Properties of Silver-Reinforced Glass Ionomer Cement
Background: Zeolite can release antimicrobial silver ions in a targeted and controlled manner for an extended time, selectively inhibiting the growth of pathogenic oral bacteria when added to dental materials. The objective of this study was to investigate the effect of the addition of zeolite to silver-reinforced glass ionomer cement on the release of silver ions over time. Methods: Five concentrations of silver–zeolite (0%, 0.5%, 1%, 2%, 4% wt) were incorporated into silver-reinforced GIC in the form of 10 mm × 2 mm circular disks (n = 5). The disks were incubated in deionized water at 37 °C and ion release from the samples was measured at 1, 2, 7, and 30 days after immersion by inductively coupled atomic emission spectroscopy. Results: Incorporating silver–zeolite increased silver ion release from silver-reinforced GIC disks compared to the control disks (p < 0.05), while incorporating zeolite alone had no effect. Higher concentrations of added silver–zeolite resulted in increased silver ion release. Sustained silver ion release was observed for up to 30 days. Conclusion: Adding silver–zeolite to silver-reinforced GIC may enhance its extended antibacterial effect in the oral cavity.
- 17 June 2024
- Published by MDPI AG in Biomimetics
- Vol. 9 (6) , 365
Open AccessEffect of Zeolite Incorporation on the Ion Release Properties of Silver-Reinforced Glass Ionomer Cement
Background: Zeolite can release antimicrobial silver ions in a targeted and controlled manner for an extended time, selectively inhibiting the growth of pathogenic oral bacteria when added to dental materials. The objective of this study was to investigate the effect of the addition of zeolite to silver-reinforced glass ionomer cement on the release of silver ions over time. Methods: Five concentrations of silver–zeolite (0%, 0.5%, 1%, 2%, 4% wt) were incorporated into silver-reinforced GIC in the form of 10 mm × 2 mm circular disks (n = 5). The disks were incubated in deionized water at 37 °C and ion release from the samples was measured at 1, 2, 7, and 30 days after immersion by inductively coupled atomic emission spectroscopy. Results: Incorporating silver–zeolite increased silver ion release from silver-reinforced GIC disks compared to the control disks (p < 0.05), while incorporating zeolite alone had no effect. Higher concentrations of added silver–zeolite resulted in increased silver ion release. Sustained silver ion release was observed for up to 30 days. Conclusion: Adding silver–zeolite to silver-reinforced GIC may enhance its extended antibacterial effect in the oral cavity.
- Open Access
- 19 June 2018
- Published by Springer Nature in Nature Communications
- Vol. 9 (1) , 2440
Author Correction: Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome
The originally published version of the Supplementary Information file associated with this Article contained an error in Supplementary Figure 3. Panel b was inadvertently replaced with a duplicate of panel a. The error has now been fixed and the corrected version of the Supplementary Information PDF is available to download from the HTML version of the Article.
- 19 June 2018
- Published by Springer Nature in Nature Communications
- Vol. 9 (1) , 2440
Open AccessAuthor Correction: Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome
The originally published version of the Supplementary Information file associated with this Article contained an error in Supplementary Figure 3. Panel b was inadvertently replaced with a duplicate of panel a. The error has now been fixed and the corrected version of the Supplementary Information PDF is available to download from the HTML version of the Article.
- Open Access
- 6 March 2018
- Published by Springer Nature in Nature Communications
- Vol. 9 (1) , 964
Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome
Nitrogen acquisition is a major challenge for herbivorous animals, and the repeated origins of herbivory across the ants have raised expectations that nutritional symbionts have shaped their diversification. Direct evidence for N provisioning by internally housed symbionts is rare in animals; among the ants, it has been documented for just one lineage. In this study we dissect functional contributions by bacteria from a conserved, multi-partite gut symbiosis in herbivorous Cephalotes ants through in vivo experiments, metagenomics, and in vitro assays. Gut bacteria recycle urea, and likely uric acid, using recycled N to synthesize essential amino acids that are acquired by hosts in substantial quantities. Specialized core symbionts of 17 studied Cephalotes species encode the pathways directing these activities, and several recycle N in vitro. These findings point to a highly efficient N economy, and a nutritional mutualism preserved for millions of years through the derived behaviors and gut anatomy of Cephalotes ants.
- 6 March 2018
- Published by Springer Nature in Nature Communications
- Vol. 9 (1) , 964
Open AccessHerbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome
Nitrogen acquisition is a major challenge for herbivorous animals, and the repeated origins of herbivory across the ants have raised expectations that nutritional symbionts have shaped their diversification. Direct evidence for N provisioning by internally housed symbionts is rare in animals; among the ants, it has been documented for just one lineage. In this study we dissect functional contributions by bacteria from a conserved, multi-partite gut symbiosis in herbivorous Cephalotes ants through in vivo experiments, metagenomics, and in vitro assays. Gut bacteria recycle urea, and likely uric acid, using recycled N to synthesize essential amino acids that are acquired by hosts in substantial quantities. Specialized core symbionts of 17 studied Cephalotes species encode the pathways directing these activities, and several recycle N in vitro. These findings point to a highly efficient N economy, and a nutritional mutualism preserved for millions of years through the derived behaviors and gut anatomy of Cephalotes ants.
- Open Access
Nitrogen conservation, conserved: 46 million years of N-recycling by the core symbionts of turtle ants
Nitrogen acquisition is a major challenge for herbivorous animals, and the repeated origins of herbivory across the ants have raised expectations that nutritional symbionts have shaped their diversification. Direct evidence for N-provisioning by internally housed symbionts is rare in animals; among the ants, it has been documented for just one lineage. In this study we dissect functional contributions by bacteria from a conserved, multi-partite gut symbiosis in herbivorous Cephalotes ants through in vivo experiments, (meta)genomics, and in vitro assays. Gut bacteria recycle urea, and likely uric acid, using recycled N to synthesize essential amino acids that are acquired by hosts in substantial quantities. Specialized core symbionts of 17 studied Cephalotes species encode the pathways directing these activities, and several recycle N in vitro . These findings point to a highly efficient N-economy, and a nutritional mutualism preserved for millions of years through the derived behaviors and gut anatomy of Cephalotes ants. Category: Biological Sciences-Evolution
Open AccessNitrogen conservation, conserved: 46 million years of N-recycling by the core symbionts of turtle ants
Nitrogen acquisition is a major challenge for herbivorous animals, and the repeated origins of herbivory across the ants have raised expectations that nutritional symbionts have shaped their diversification. Direct evidence for N-provisioning by internally housed symbionts is rare in animals; among the ants, it has been documented for just one lineage. In this study we dissect functional contributions by bacteria from a conserved, multi-partite gut symbiosis in herbivorous Cephalotes ants through in vivo experiments, (meta)genomics, and in vitro assays. Gut bacteria recycle urea, and likely uric acid, using recycled N to synthesize essential amino acids that are acquired by hosts in substantial quantities. Specialized core symbionts of 17 studied Cephalotes species encode the pathways directing these activities, and several recycle N in vitro . These findings point to a highly efficient N-economy, and a nutritional mutualism preserved for millions of years through the derived behaviors and gut anatomy of Cephalotes ants. Category: Biological Sciences-Evolution
- Open Access
- 8 May 2017
- Published by American Society for Clinical Investigation in Journal of Clinical Investigation
- Vol. 127 (6) , 2407-2417
Hepatic metal ion transporter ZIP8 regulates manganese homeostasis and manganese-dependent enzyme activity
Genetic variants at the solute carrier family 39 member 8 (SLC39A8) gene locus are associated with the regulation of whole-blood manganese (Mn) and multiple physiological traits. SLC39A8 encodes ZIP8, a divalent metal ion transporter best known for zinc transport. Here, we hypothesized that ZIP8 regulates Mn homeostasis and Mn-dependent enzymes to influence metabolism. We generated Slc39a8-inducible global-knockout (ZIP8-iKO) and liver-specific–knockout (ZIP8-LSKO) mice and observed markedly decreased Mn levels in multiple organs and whole blood of both mouse models. By contrast, liver-specific overexpression of human ZIP8 (adeno-associated virus–ZIP8 [AAV-ZIP8]) resulted in increased tissue and whole blood Mn levels. ZIP8 expression was localized to the hepatocyte canalicular membrane, and bile Mn levels were increased in ZIP8-LSKO and decreased in AAV-ZIP8 mice. ZIP8-LSKO mice also displayed decreased liver and kidney activity of the Mn-dependent enzyme arginase. Both ZIP8-iKO and ZIP8-LSKO mice had defective protein N-glycosylation, and humans homozygous for the minor allele at the lead SLC39A8 variant showed hypogalactosylation, consistent with decreased activity of another Mn-dependent enzyme, β-1,4-galactosyltransferase. In summary, hepatic ZIP8 reclaims Mn from bile and regulates whole-body Mn homeostasis, thereby modulating the activity of Mn-dependent enzymes. This work provides a mechanistic basis for the association of SLC39A8 with whole-blood Mn, potentially linking SLC39A8 variants with other physiological traits.
- 8 May 2017
- Published by American Society for Clinical Investigation in Journal of Clinical Investigation
- Vol. 127 (6) , 2407-2417
Open AccessHepatic metal ion transporter ZIP8 regulates manganese homeostasis and manganese-dependent enzyme activity
Genetic variants at the solute carrier family 39 member 8 (SLC39A8) gene locus are associated with the regulation of whole-blood manganese (Mn) and multiple physiological traits. SLC39A8 encodes ZIP8, a divalent metal ion transporter best known for zinc transport. Here, we hypothesized that ZIP8 regulates Mn homeostasis and Mn-dependent enzymes to influence metabolism. We generated Slc39a8-inducible global-knockout (ZIP8-iKO) and liver-specific–knockout (ZIP8-LSKO) mice and observed markedly decreased Mn levels in multiple organs and whole blood of both mouse models. By contrast, liver-specific overexpression of human ZIP8 (adeno-associated virus–ZIP8 [AAV-ZIP8]) resulted in increased tissue and whole blood Mn levels. ZIP8 expression was localized to the hepatocyte canalicular membrane, and bile Mn levels were increased in ZIP8-LSKO and decreased in AAV-ZIP8 mice. ZIP8-LSKO mice also displayed decreased liver and kidney activity of the Mn-dependent enzyme arginase. Both ZIP8-iKO and ZIP8-LSKO mice had defective protein N-glycosylation, and humans homozygous for the minor allele at the lead SLC39A8 variant showed hypogalactosylation, consistent with decreased activity of another Mn-dependent enzyme, β-1,4-galactosyltransferase. In summary, hepatic ZIP8 reclaims Mn from bile and regulates whole-body Mn homeostasis, thereby modulating the activity of Mn-dependent enzymes. This work provides a mechanistic basis for the association of SLC39A8 with whole-blood Mn, potentially linking SLC39A8 variants with other physiological traits.
- 1 January 2006
- Published by Wiley in Soil Science Society of America Journal
- Vol. 70 (1) , 153-162
Litter Quality and Climate Decouple Nitrogen Mineralization and Productivity in Chilean Temperate Rainforests
We measured litter quality, N mineralization, air and soil temperatures, soil moisture, and aboveground net primary production (ANPP) at 18 plots in three forest types typical of full‐stature forests found on western slopes of the Cordillera de Piuchué (CP) on Isla de Chiloé in southern Chile. The primary objectives were to examine the range of net N mineralization across forest types that have different vegetation and litter composition, assess probable controls on mineral N production and leaching, and to determine if the relationship between N mineralization and ANPP was similar to that observed in cool temperate northern hemisphere forests. Average annual litter lignin/N ratios were high in the evergreen montane broadleaf forest plots (50:1) and very high in the montane conifer plots (80:1). Net N mineralization during the summer months was correspondingly low (1.2 and 2.2 kg ha −1 , respectively). The high litter lignin content and associated low rate of N mineralization can explain the extremely low concentrations of mineral N in soils and upland streams of this region. In the broadleaf evergreen coastal forest plots, lignin/N ratio was lower (23:1) and N mineralized was considerably greater over the same measurement period than in the montane forest plots (14 kg ha −1 ). In contrast to findings in many cool temperate northern hemisphere forests, ANNP in the broadleaf forest type was high (average 11.1 Mg ha −1 yr −1 ) in spite of the low net N mineralization rates, and ANPP and net N mineralized were not correlated. Net N mineralization was best correlated with litter quality, soil temperature, and soil moisture content, and ANPP was best correlated with growing degree days.
- 1 January 2006
- Published by Wiley in Soil Science Society of America Journal
- Vol. 70 (1) , 153-162
Litter Quality and Climate Decouple Nitrogen Mineralization and Productivity in Chilean Temperate Rainforests
We measured litter quality, N mineralization, air and soil temperatures, soil moisture, and aboveground net primary production (ANPP) at 18 plots in three forest types typical of full‐stature forests found on western slopes of the Cordillera de Piuchué (CP) on Isla de Chiloé in southern Chile. The primary objectives were to examine the range of net N mineralization across forest types that have different vegetation and litter composition, assess probable controls on mineral N production and leaching, and to determine if the relationship between N mineralization and ANPP was similar to that observed in cool temperate northern hemisphere forests. Average annual litter lignin/N ratios were high in the evergreen montane broadleaf forest plots (50:1) and very high in the montane conifer plots (80:1). Net N mineralization during the summer months was correspondingly low (1.2 and 2.2 kg ha −1 , respectively). The high litter lignin content and associated low rate of N mineralization can explain the extremely low concentrations of mineral N in soils and upland streams of this region. In the broadleaf evergreen coastal forest plots, lignin/N ratio was lower (23:1) and N mineralized was considerably greater over the same measurement period than in the montane forest plots (14 kg ha −1 ). In contrast to findings in many cool temperate northern hemisphere forests, ANNP in the broadleaf forest type was high (average 11.1 Mg ha −1 yr −1 ) in spite of the low net N mineralization rates, and ANPP and net N mineralized were not correlated. Net N mineralization was best correlated with litter quality, soil temperature, and soil moisture content, and ANPP was best correlated with growing degree days.
- 1 January 2003
- Published by Association for Tropical Biology in Biotropica
- Vol. 35 (1) , 2
Labile Phosphorus in Soils of Forest Fallows and Primary Forest in the Bragantina Region, Brazil1
- 1 January 2003
- Published by Association for Tropical Biology in Biotropica
- Vol. 35 (1) , 2
Labile Phosphorus in Soils of Forest Fallows and Primary Forest in the Bragantina Region, Brazil1