Divina M. Amalin
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Divina M. Amalin has a total of 81 co-authors. Here are the top co-authors by number of shared publications:
- Kozo Watanabe
Center for Marine Environmental Studies (CMES), Ehime University, Bunkyo-cho 3, Matsuyama, 790-8577, Japan
8 shared publications - Thaddeus Marzo Carvajal
Department of Biology, College of Science, De La Salle University, Manila 1004, Philippines
6 shared publications - Billy Joel M. Almarinez
Biology Department, College of Science, De La Salle University, Taft Avenue, Manila 1004, Philippines
4 shared publications - Alberto T. Barrion
Biology Department, College of Science, De La Salle University, Taft Avenue, Manila 1004, Philippines
2 shared publications - Evangelyn C. Alocilja
Nano-Biosensors Lab, Biosystems and Agricultural Engineering, Michigan State University, East Lansing, MI 48824, USA
2 shared publications - Howell Tsai Ho
College of Arts, Sciences and Education, Trinity University of Asia, Quezon City, Philippines
2 shared publications
Latest Publications
- Open Access
- 24 January 2025
- Published by MDPI AG in Biosensors
- Vol. 15 (2) , 71
DNA-Based Nanobiosensor for the Colorimetric Detection of Dengue Virus Serotype 2 Synthetic Target Oligonucleotide
Annually, the Philippines is burdened by a high number of infections and deaths due to Dengue. This disease is caused by the Dengue virus (DENV) and is transmitted from one human host to another by the female Aedes aegypti mosquito. Being a developing country, most of the high-risk areas in the Philippines are resource-limited and cannot afford equipment for detection and monitoring. Moreover, traditional clinical diagnoses of DENV infection are costly and time-consuming and require expertise. Hence, it is important to establish effective vector control and surveillance measures. In this study, we developed a DNA-based nanobiosensor for the colorimetric detection of Dengue virus serotype 2 (DENV-2) synthetic target DNA (stDNA S2) using gold nanoparticles (AuNPs). We successfully functionalized dextrin-capped gold nanoparticles with the designed DENV-2 oligonucleotide probes. The detection of the complementary stDNA S2, indicated by the pink-colored solution, was successfully performed within 15 min using 0.40 M NaCl solution. We were able to detect up to 36.14 ng/μL of stDNA S2 with some cross-reactivity observed with one non-complementary target. We believe that our study offers a basis for developing nanobiosensors for other DENV serotypes.
- 24 January 2025
- Published by MDPI AG in Biosensors
- Vol. 15 (2) , 71
Open AccessDNA-Based Nanobiosensor for the Colorimetric Detection of Dengue Virus Serotype 2 Synthetic Target Oligonucleotide
Annually, the Philippines is burdened by a high number of infections and deaths due to Dengue. This disease is caused by the Dengue virus (DENV) and is transmitted from one human host to another by the female Aedes aegypti mosquito. Being a developing country, most of the high-risk areas in the Philippines are resource-limited and cannot afford equipment for detection and monitoring. Moreover, traditional clinical diagnoses of DENV infection are costly and time-consuming and require expertise. Hence, it is important to establish effective vector control and surveillance measures. In this study, we developed a DNA-based nanobiosensor for the colorimetric detection of Dengue virus serotype 2 (DENV-2) synthetic target DNA (stDNA S2) using gold nanoparticles (AuNPs). We successfully functionalized dextrin-capped gold nanoparticles with the designed DENV-2 oligonucleotide probes. The detection of the complementary stDNA S2, indicated by the pink-colored solution, was successfully performed within 15 min using 0.40 M NaCl solution. We were able to detect up to 36.14 ng/μL of stDNA S2 with some cross-reactivity observed with one non-complementary target. We believe that our study offers a basis for developing nanobiosensors for other DENV serotypes.
- Open Access
Rapid Automatic Cacao Pod Borer Detection Using Edge Computing on Low-End Mobile Devices
The cacao pod borer (CPB) (Conopomorpha cramerella) is an invasive insect that causes significant economic loss for cacao farmers. One of the most efficient ways to reduce CPB damage is to continuously monitor its presence. Currently, most automated technologies for continuous insect pest monitoring rely on an internet connection and a power source. However, most cacao plantations are remotely located and have limited access to internet and power sources; therefore, a simpler and readily available tool is necessary to enable continuous monitoring. This research proposes a mobile application developed for rapid and on-site counting of CPBs on sticky paper traps. A CPB counting algorithm was developed and optimized to enable on-device computations despite memory constraints and limited capacity of low-end mobile phones. The proposed algorithm has an F1-score of 0.88, with no significant difference from expert counts (R2 = 0.97, p-value = 0.55, = 0.05). The mobile application can be used to provide the required information for pest control methods on-demand and is also accessible for low-income farms. This is one of the first few works on enabling on-device processing for insect pest monitoring.Open AccessRapid Automatic Cacao Pod Borer Detection Using Edge Computing on Low-End Mobile Devices
The cacao pod borer (CPB) (Conopomorpha cramerella) is an invasive insect that causes significant economic loss for cacao farmers. One of the most efficient ways to reduce CPB damage is to continuously monitor its presence. Currently, most automated technologies for continuous insect pest monitoring rely on an internet connection and a power source. However, most cacao plantations are remotely located and have limited access to internet and power sources; therefore, a simpler and readily available tool is necessary to enable continuous monitoring. This research proposes a mobile application developed for rapid and on-site counting of CPBs on sticky paper traps. A CPB counting algorithm was developed and optimized to enable on-device computations despite memory constraints and limited capacity of low-end mobile phones. The proposed algorithm has an F1-score of 0.88, with no significant difference from expert counts (R2 = 0.97, p-value = 0.55, = 0.05). The mobile application can be used to provide the required information for pest control methods on-demand and is also accessible for low-income farms. This is one of the first few works on enabling on-device processing for insect pest monitoring. - 11 February 2024
- Published by Elsevier in Science of The Total Environment
- Vol. 919, 170921
Detection of SARS-CoV-2 and Omicron variant RNA in wastewater samples from Manila, Philippines
- 11 February 2024
- Published by Elsevier in Science of The Total Environment
- Vol. 919, 170921
Detection of SARS-CoV-2 and Omicron variant RNA in wastewater samples from Manila, Philippines
- Open Access
Network Modeling for Post-Entry Management of Invasive Pest Species in the Philippines: The Case of the Colorado Potato Beetle, Leptinotarsa decemlineata (Say, 1824) (Coleoptera: Chrysomelidae)
Crop shifting is considered as an important strategy to secure future food supply in the face of climate change. However, use of this adaptation strategy needs to consider the risk posed by changes in the geographic range of pests that feed on selected crops. Failure to account for this threat can lead to disastrous results. Models can be used to give insights on how best to manage these risks. In this paper, the socioecological process graph technique is used to develop a network model of interactions among crops, invasive pests, and biological control agents. The model is applied to a prospective analysis of the potential entry of the Colorado potato beetle into the Philippines just as efforts are being made to scale up potato cultivation as a food security measure. The modeling scenarios indicate the existence of alternative viable pest control strategies based on the use of biological control agents. Insights drawn from the model can be used as the basis to ecologically engineer agricultural systems that are resistant to pests.
Open AccessNetwork Modeling for Post-Entry Management of Invasive Pest Species in the Philippines: The Case of the Colorado Potato Beetle, Leptinotarsa decemlineata (Say, 1824) (Coleoptera: Chrysomelidae)
Crop shifting is considered as an important strategy to secure future food supply in the face of climate change. However, use of this adaptation strategy needs to consider the risk posed by changes in the geographic range of pests that feed on selected crops. Failure to account for this threat can lead to disastrous results. Models can be used to give insights on how best to manage these risks. In this paper, the socioecological process graph technique is used to develop a network model of interactions among crops, invasive pests, and biological control agents. The model is applied to a prospective analysis of the potential entry of the Colorado potato beetle into the Philippines just as efforts are being made to scale up potato cultivation as a food security measure. The modeling scenarios indicate the existence of alternative viable pest control strategies based on the use of biological control agents. Insights drawn from the model can be used as the basis to ecologically engineer agricultural systems that are resistant to pests.
- Open Access
- 4 August 2023
- Published by Frontiers Media SA in Frontiers in Agronomy
- Vol. 5, 1213131
Evaluation of Philippine-sourced clay particles as coating agents of cacao pods and carrier of entomopathogen against cacao pest, Helopeltis bakeri Poppius
Evaluation of the efficacy of clay particles as a coating agent of cacao pods and carrier of entomopathogen, Metarhizium anisopliae Sorokin, was conducted for the control of cacao mirid bug (CMB), Helopeltis bakeri Poppius. Choice and no-choice tests were performed to evaluate Philippine-sourced clay particles as a coating agent of cacao pods to deter CMB feeding, in comparison with the commercially available particle film (US kaolin Surround®). To determine the most efficient local clay particles in protecting the pods from CMB feeding, six (6) treatments were evaluated namely, Philippine-sourced kaolin (PH kaolin), zeolite (PH zeolite), bentonite (PH bentonite), US kaolin, water (negative control), and a commercial synthetic insecticide thiamethoxam (Actara®) (positive control). All treatments were subjected to choice and no-choice tests. Among the Philippine clay particles tested in both tests, PH zeolite showed significant coating and deterred CMB from feeding. Since the US Kaolin and zeolite showed significant feeding deterrent effects on CMB, these treatments were tested as carriers of entomopathogenic fungi, M. anisopliae, including water (negative control) and thiamethoxam. Results showed that zeolite is a good carrier of the spores of M. anisopliae as its effects to deter CMB feeding started 24 hours after exposure. This was confirmed by positive M. anisopliae extraction from dead CMB through potato dextrose agar (PDA) plating.
- 4 August 2023
- Published by Frontiers Media SA in Frontiers in Agronomy
- Vol. 5, 1213131
Open AccessEvaluation of Philippine-sourced clay particles as coating agents of cacao pods and carrier of entomopathogen against cacao pest, Helopeltis bakeri Poppius
Evaluation of the efficacy of clay particles as a coating agent of cacao pods and carrier of entomopathogen, Metarhizium anisopliae Sorokin, was conducted for the control of cacao mirid bug (CMB), Helopeltis bakeri Poppius. Choice and no-choice tests were performed to evaluate Philippine-sourced clay particles as a coating agent of cacao pods to deter CMB feeding, in comparison with the commercially available particle film (US kaolin Surround®). To determine the most efficient local clay particles in protecting the pods from CMB feeding, six (6) treatments were evaluated namely, Philippine-sourced kaolin (PH kaolin), zeolite (PH zeolite), bentonite (PH bentonite), US kaolin, water (negative control), and a commercial synthetic insecticide thiamethoxam (Actara®) (positive control). All treatments were subjected to choice and no-choice tests. Among the Philippine clay particles tested in both tests, PH zeolite showed significant coating and deterred CMB from feeding. Since the US Kaolin and zeolite showed significant feeding deterrent effects on CMB, these treatments were tested as carriers of entomopathogenic fungi, M. anisopliae, including water (negative control) and thiamethoxam. Results showed that zeolite is a good carrier of the spores of M. anisopliae as its effects to deter CMB feeding started 24 hours after exposure. This was confirmed by positive M. anisopliae extraction from dead CMB through potato dextrose agar (PDA) plating.
- Open Access
- 19 May 2023
- Published by Frontiers Media SA in Frontiers in Agronomy
- Vol. 5
Field evaluation of the sex pheromone of the cacao pod borer (Conopomorpha cramerella Snellen) in the Philippines
Cacao is a promising high-value crop in the Philippines and is considered one of the key players globally in providing the raw materials for chocolate making. However, before the Philippines can take this market opportunity, production constraints from various pests should be addressed. The cacao pod borer (CPB), Conopomorpha cramerella, is one of the major insect pests of cacao in the Philippines, which can cause up to 50% annual loss or even higher if proper management is not employed. Management of CPB heavily relies on chemical control but is becoming unpopular because of its high cost and health risk to people and the environment. A number of efforts have been made to develop sex pheromones to monitor and control CPB. A field bioassay of the new blend of CPB sex pheromones was conducted in southern Philippines to determine its efficiency and identify the appropriate trap height placement in a cacao field, which is important in maximizing the efficiency of the sex pheromone traps for inclusion in the integrated pest management (IPM) program of CPB. Pheromone lures at four different trap heights (1.0 m, 0.5 m above the canopy, 0.0 m or along the canopy, and 0.5 m below the canopy) and a blank lure (control) placed 1.0 m above the canopy were evaluated in terms of male CPB trap catches. Results showed significantly higher male CPB trap catches when installed at least 0.5 m above the canopy while minimal to zero male CPB catches were obtained from the control traps with blank lures, confirming the attractiveness of the new blend of the CPB sex pheromone in the field. This suggests the reliability of the pheromone-based method to monitor and control CPB and as a major component of the IPM program.
- 19 May 2023
- Published by Frontiers Media SA in Frontiers in Agronomy
- Vol. 5
Open AccessField evaluation of the sex pheromone of the cacao pod borer (Conopomorpha cramerella Snellen) in the Philippines
Cacao is a promising high-value crop in the Philippines and is considered one of the key players globally in providing the raw materials for chocolate making. However, before the Philippines can take this market opportunity, production constraints from various pests should be addressed. The cacao pod borer (CPB), Conopomorpha cramerella, is one of the major insect pests of cacao in the Philippines, which can cause up to 50% annual loss or even higher if proper management is not employed. Management of CPB heavily relies on chemical control but is becoming unpopular because of its high cost and health risk to people and the environment. A number of efforts have been made to develop sex pheromones to monitor and control CPB. A field bioassay of the new blend of CPB sex pheromones was conducted in southern Philippines to determine its efficiency and identify the appropriate trap height placement in a cacao field, which is important in maximizing the efficiency of the sex pheromone traps for inclusion in the integrated pest management (IPM) program of CPB. Pheromone lures at four different trap heights (1.0 m, 0.5 m above the canopy, 0.0 m or along the canopy, and 0.5 m below the canopy) and a blank lure (control) placed 1.0 m above the canopy were evaluated in terms of male CPB trap catches. Results showed significantly higher male CPB trap catches when installed at least 0.5 m above the canopy while minimal to zero male CPB catches were obtained from the control traps with blank lures, confirming the attractiveness of the new blend of the CPB sex pheromone in the field. This suggests the reliability of the pheromone-based method to monitor and control CPB and as a major component of the IPM program.
- Top Cited PapersOpen Access
Biological Control of Plant Diseases: An Evolutionary and Eco-Economic Consideration
Biological control is considered as a promising alternative to pesticide and plant resistance to manage plant diseases, but a better understanding of the interaction of its natural and societal functions is necessary for its endorsement. The introduction of biological control agents (BCAs) alters the interaction among plants, pathogens, and environments, leading to biological and physical cascades that influence pathogen fitness, plant health, and ecological function. These interrelationships generate a landscape of tradeoffs among natural and social functions of biological control, and a comprehensive evaluation of its benefits and costs across social and farmer perspectives is required to ensure the sustainable development and deployment of the approach. Consequently, there should be a shift of disease control philosophy from a single concept that only concerns crop productivity to a multifaceted concept concerning crop productivity, ecological function, social acceptability, and economical accessibility. To achieve these goals, attempts should make to develop “green” BCAs used dynamically and synthetically with other disease control approaches in an integrated disease management scheme, and evolutionary biologists should play an increasing role in formulating the strategies. Governments and the public should also play a role in the development and implementation of biological control strategies supporting positive externality.
Top Cited PapersOpen AccessBiological Control of Plant Diseases: An Evolutionary and Eco-Economic Consideration
Biological control is considered as a promising alternative to pesticide and plant resistance to manage plant diseases, but a better understanding of the interaction of its natural and societal functions is necessary for its endorsement. The introduction of biological control agents (BCAs) alters the interaction among plants, pathogens, and environments, leading to biological and physical cascades that influence pathogen fitness, plant health, and ecological function. These interrelationships generate a landscape of tradeoffs among natural and social functions of biological control, and a comprehensive evaluation of its benefits and costs across social and farmer perspectives is required to ensure the sustainable development and deployment of the approach. Consequently, there should be a shift of disease control philosophy from a single concept that only concerns crop productivity to a multifaceted concept concerning crop productivity, ecological function, social acceptability, and economical accessibility. To achieve these goals, attempts should make to develop “green” BCAs used dynamically and synthetically with other disease control approaches in an integrated disease management scheme, and evolutionary biologists should play an increasing role in formulating the strategies. Governments and the public should also play a role in the development and implementation of biological control strategies supporting positive externality.
- Open Access
- 26 August 2021
- Published by MDPI AG in Encyclopedia
- Vol. 1 (3) , 871-892
Next Generation of AMR Network
Antimicrobial resistance (AMR) is one of the top 10 global public health threats facing humanity, especially in low-resource settings, and requires an interdisciplinary response across academia, government, countries, and societies. If unchecked, AMR will hamper progress towards reaching the United Nations Sustainable Development Goals (SDGs), including ending poverty and hunger, promoting healthy lives and well-being, and achieving sustained economic growth. There are many global initiatives to curb the effects of AMR, but significant gaps remain. New ways of thinking and operating in the context of the SDGs are essential to making progress. In this entry, we define the next generation of the AMR research network, its composition, and strategic activities that can help mitigate the threats due to AMR at the local, regional, and global levels. This is supported by a review of recent literature and bibliometric and network analyses to examine the current and future state of AMR research networks for global health and sustainable development.
- 26 August 2021
- Published by MDPI AG in Encyclopedia
- Vol. 1 (3) , 871-892
Open AccessNext Generation of AMR Network
Antimicrobial resistance (AMR) is one of the top 10 global public health threats facing humanity, especially in low-resource settings, and requires an interdisciplinary response across academia, government, countries, and societies. If unchecked, AMR will hamper progress towards reaching the United Nations Sustainable Development Goals (SDGs), including ending poverty and hunger, promoting healthy lives and well-being, and achieving sustained economic growth. There are many global initiatives to curb the effects of AMR, but significant gaps remain. New ways of thinking and operating in the context of the SDGs are essential to making progress. In this entry, we define the next generation of the AMR research network, its composition, and strategic activities that can help mitigate the threats due to AMR at the local, regional, and global levels. This is supported by a review of recent literature and bibliometric and network analyses to examine the current and future state of AMR research networks for global health and sustainable development.
- Open Access
A Bioclimate-Based Maximum Entropy Model for Comperiella calauanica Barrion, Almarinez and Amalin (Hymenoptera: Encyrtidae) in the Philippines
Comperiella calauanica is a host-specific endoparasitoid and effective biological control agent of the diaspidid Aspidiotus rigidus, whose outbreak from 2010 to 2015 severely threatened the coconut industry in the Philippines. Using the maximum entropy (Maxent) algorithm, we developed a species distribution model (SDM) for C. calauanica based on 19 bioclimatic variables, using occurrence data obtained mostly from field surveys conducted in A. rigidus-infested areas in Luzon Island from 2014 to 2016. The calculated the area under the ROC curve (AUC) values for the model were very high (0.966, standard deviation = 0.005), indicating the model’s high predictive power. Precipitation seasonality was found to have the highest relative contribution to model development. Response curves produced by Maxent suggested the positive influence of mean temperature of the driest quarter, and negative influence of precipitation of the driest and coldest quarters on habitat suitability. Given that C. calauanica has been found to always occur with A. rigidus in Luzon Island due to high host-specificity, the SDM for the parasitoid may also be considered and used as a predictive model for its host. This was confirmed through field surveys conducted between late 2016 and early 2018, which found and confirmed the occurrence of A. rigidus in three areas predicted by the SDM to have moderate to high habitat suitability or probability of occurrence of C. calauanica: Zamboanga City in Mindanao; Isabela City in Basilan Island; and Tablas Island in Romblon. This validation in the field demonstrated the utility of the bioclimate-based SDM for C. calauanica in predicting habitat suitability or probability of occurrence of A. rigidus in the Philippines.
Open AccessA Bioclimate-Based Maximum Entropy Model for Comperiella calauanica Barrion, Almarinez and Amalin (Hymenoptera: Encyrtidae) in the Philippines
Comperiella calauanica is a host-specific endoparasitoid and effective biological control agent of the diaspidid Aspidiotus rigidus, whose outbreak from 2010 to 2015 severely threatened the coconut industry in the Philippines. Using the maximum entropy (Maxent) algorithm, we developed a species distribution model (SDM) for C. calauanica based on 19 bioclimatic variables, using occurrence data obtained mostly from field surveys conducted in A. rigidus-infested areas in Luzon Island from 2014 to 2016. The calculated the area under the ROC curve (AUC) values for the model were very high (0.966, standard deviation = 0.005), indicating the model’s high predictive power. Precipitation seasonality was found to have the highest relative contribution to model development. Response curves produced by Maxent suggested the positive influence of mean temperature of the driest quarter, and negative influence of precipitation of the driest and coldest quarters on habitat suitability. Given that C. calauanica has been found to always occur with A. rigidus in Luzon Island due to high host-specificity, the SDM for the parasitoid may also be considered and used as a predictive model for its host. This was confirmed through field surveys conducted between late 2016 and early 2018, which found and confirmed the occurrence of A. rigidus in three areas predicted by the SDM to have moderate to high habitat suitability or probability of occurrence of C. calauanica: Zamboanga City in Mindanao; Isabela City in Basilan Island; and Tablas Island in Romblon. This validation in the field demonstrated the utility of the bioclimate-based SDM for C. calauanica in predicting habitat suitability or probability of occurrence of A. rigidus in the Philippines.
- Open Access
- 1 January 2021
- Published by Elsevier in Infection, Genetics and Evolution
- Vol. 87, 104676
Wing geometry and genetic analyses reveal contrasting spatial structures between male and female Aedes aegypti (L.) (Diptera: Culicidae) populations in metropolitan Manila, Philippines
- 1 January 2021
- Published by Elsevier in Infection, Genetics and Evolution
- Vol. 87, 104676
Open AccessWing geometry and genetic analyses reveal contrasting spatial structures between male and female Aedes aegypti (L.) (Diptera: Culicidae) populations in metropolitan Manila, Philippines