Shikui Song
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Research Interests
Shikui Song has a total of 41 co-authors. Here are the top co-authors by number of shared publications:
- Sirpaul Jaikishun
Department of Biology, Faculty of Natural Sciences, University of Guyana, Turkeyen Campus, Guyana
3 shared publications Zhenbiao Yang
College of Life Sciences and Fujian Provincial, Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China and FAFU-UCR, Joint Center for Horticultural Biology and Metabolomics, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China and Institute of Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA
3 shared publicationsChongjing Dai
Horticulture and Metabolic Biology Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, P.R. China
2 shared publicationsJun Ma
Horticulture and Metabolic Biology Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, P.R. China
2 shared publicationsTongda Xu
Horticulture and Metabolic Biology Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, P.R. China
2 shared publicationsYanfang Wang
Horticulture and Metabolic Biology Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, P.R. China
2 shared publications
Latest Publications
- Open Access
The Role of FveAFB5 in Auxin-Mediated Responses and Growth in Strawberries
Auxin is a crucial hormone that regulates various aspects of plant growth and development. It exerts its effects through multiple signaling pathways, including the TIR1/AFB-based transcriptional regulation in the nucleus. However, the specific role of auxin receptors in determining developmental features in the strawberry (Fragaria vesca) remains unclear. Our research has identified FveAFB5, a potential auxin receptor, as a key player in the development and auxin responses of woodland strawberry diploid variety Hawaii 4. FveAFB5 positively influences lateral root development, plant height, and fruit development, while negatively regulating shoot branching. Moreover, the mutation of FveAFB5 confers strong resistance to the auxinic herbicide picloram, compared to dicamba and quinclorac. Transcriptome analysis suggests that FveAFB5 may initiate auxin and abscisic acid signaling to inhibit growth in response to picloram. Therefore, FveAFB5 likely acts as an auxin receptor involved in regulating multiple processes related to strawberry growth and development.
Open AccessThe Role of FveAFB5 in Auxin-Mediated Responses and Growth in Strawberries
Auxin is a crucial hormone that regulates various aspects of plant growth and development. It exerts its effects through multiple signaling pathways, including the TIR1/AFB-based transcriptional regulation in the nucleus. However, the specific role of auxin receptors in determining developmental features in the strawberry (Fragaria vesca) remains unclear. Our research has identified FveAFB5, a potential auxin receptor, as a key player in the development and auxin responses of woodland strawberry diploid variety Hawaii 4. FveAFB5 positively influences lateral root development, plant height, and fruit development, while negatively regulating shoot branching. Moreover, the mutation of FveAFB5 confers strong resistance to the auxinic herbicide picloram, compared to dicamba and quinclorac. Transcriptome analysis suggests that FveAFB5 may initiate auxin and abscisic acid signaling to inhibit growth in response to picloram. Therefore, FveAFB5 likely acts as an auxin receptor involved in regulating multiple processes related to strawberry growth and development.
- 15 November 2023
- Published by Sciencedomain International in Journal of Applied Life Sciences International
- Vol. 26 (6) , 75-87
Screening for Salt Tolerance in Chenopodium quinoa Genotype Seedlings through Germination in a Hydroponic System
Quinoa (Chenopodium quinoa Willd.) is poised to be a global life changer with its ability to adapt to a wide range of abiotic stresses and as a highly nutritious and sustainable food source. A trial on screening of salt tolerance was conducted at the germination and seedling stages of 69 quinoa genotypes in different concentrations of NaCl 0 (CK), 100, 200, 300, 400, and 500 mM for 21 days in the MS/2 mixture. This results in 16 genotypes with >50% germination at 400 mM NaCl. These were reassessed in germination indices and relative growth. Results indicated that Chadmo had the highest germinability of 97% and 32.76% relative height among the 16 genotypes. Considering the germination indices, Chadmo had significantly different values (3.05±0.19 day-1) in mean germination time, coefficient of variation of the germination time (38.76±1.97%), the velocity of germination (0.23±0.01 day-1), the uncertainty of germination (0.54±0.08 bit), synchrony of germination (0.42±0.05 and Timson’s index (48.89) with significant differences (P<0.05) among the genotypes. Moreover, Chadmo had the highest membrane stability index (MSI) (60.03±11.84) at 400 mM NaCl and the least relative change between the CK and 400 mM NaCl with 30.87±2.01%. Assessing the stress inhibitory effect of the 16 genotypes, Chadmo had the least relative difference between the CK and 400 mM NaCl with shoot length of 34.34%, root length of 25.57%, fresh weight of 22.05%, dry weight of 3.62% and moisture content of 1.99% with Tukey analyses identifying significant differences (p<0.05). To select the salt-sensitive genotype, an assessment was done on five genotypes that exhibited the least germination at 200 mM NaCl. Kankolla had the least germinability with 12 and 4% at 100 and 200 mM NaCl, respectively. Considering all these parameters, Chadmo and Kankolla were selected as salt-tolerant and salt-sensitive for further analyses.
- 15 November 2023
- Published by Sciencedomain International in Journal of Applied Life Sciences International
- Vol. 26 (6) , 75-87
Screening for Salt Tolerance in Chenopodium quinoa Genotype Seedlings through Germination in a Hydroponic System
Quinoa (Chenopodium quinoa Willd.) is poised to be a global life changer with its ability to adapt to a wide range of abiotic stresses and as a highly nutritious and sustainable food source. A trial on screening of salt tolerance was conducted at the germination and seedling stages of 69 quinoa genotypes in different concentrations of NaCl 0 (CK), 100, 200, 300, 400, and 500 mM for 21 days in the MS/2 mixture. This results in 16 genotypes with >50% germination at 400 mM NaCl. These were reassessed in germination indices and relative growth. Results indicated that Chadmo had the highest germinability of 97% and 32.76% relative height among the 16 genotypes. Considering the germination indices, Chadmo had significantly different values (3.05±0.19 day-1) in mean germination time, coefficient of variation of the germination time (38.76±1.97%), the velocity of germination (0.23±0.01 day-1), the uncertainty of germination (0.54±0.08 bit), synchrony of germination (0.42±0.05 and Timson’s index (48.89) with significant differences (P<0.05) among the genotypes. Moreover, Chadmo had the highest membrane stability index (MSI) (60.03±11.84) at 400 mM NaCl and the least relative change between the CK and 400 mM NaCl with 30.87±2.01%. Assessing the stress inhibitory effect of the 16 genotypes, Chadmo had the least relative difference between the CK and 400 mM NaCl with shoot length of 34.34%, root length of 25.57%, fresh weight of 22.05%, dry weight of 3.62% and moisture content of 1.99% with Tukey analyses identifying significant differences (p<0.05). To select the salt-sensitive genotype, an assessment was done on five genotypes that exhibited the least germination at 200 mM NaCl. Kankolla had the least germinability with 12 and 4% at 100 and 200 mM NaCl, respectively. Considering all these parameters, Chadmo and Kankolla were selected as salt-tolerant and salt-sensitive for further analyses.
- 2 August 2023
- Published by Sciencedomain International in Journal of Advances in Biology & Biotechnology
- Vol. 26 (6) , 20-31
The Establishment of Two Efficient Transformation Systems to Manipulate and Analyze Gene Functions in Quinoa (Chenopodium quinoa Willd.)
Quinoa (C. quinoa) is considered a gluten-free food with abundant nutrients and high tolerance to multiple abiotic stresses, which is the potential to become a major crop in future. Genetic manipulation will provide powerful tools to investigate the function and mechanism of those important genes in the regulation of quinoa development and stress responses, and further improve the quinoa in the field. However, the efficient plant transformation system for quinoa has not been well developed yet. Here, we established two rapid and efficient transformation systems for quinoa by using hairy roots and agroinfiltration of leaves, which provide useful tools for quick analysis of gene function. Hairy roots were obtained from three types of explants: cotyledon-nod with hypocotyl, cotyledon itself, and hypocotyl pieces. Interestingly, explants of cotyledon-nod with hypocotyl showed the highest transformation efficiency at 67.9%, and cotyledon displayed medium efficiency at 42.2%, while hypocotyl explants with the lowest at 31.6%. We also obtained transgenic quinoa roots successfully in-vivo, which showed low efficiency but provides a potential method to test gene functions in live plants. By using young leaves for agroinfiltration, direct injection showed a better transgenic effect compared with vacuum penetration. In juxtaposition, the transformation systems using both hairy root and leaf infiltration establish an efficient and convenient way to manipulate and analyze gene functions in quinoa, and a potential strategy for transgenic quinoa.
- 2 August 2023
- Published by Sciencedomain International in Journal of Advances in Biology & Biotechnology
- Vol. 26 (6) , 20-31
The Establishment of Two Efficient Transformation Systems to Manipulate and Analyze Gene Functions in Quinoa (Chenopodium quinoa Willd.)
Quinoa (C. quinoa) is considered a gluten-free food with abundant nutrients and high tolerance to multiple abiotic stresses, which is the potential to become a major crop in future. Genetic manipulation will provide powerful tools to investigate the function and mechanism of those important genes in the regulation of quinoa development and stress responses, and further improve the quinoa in the field. However, the efficient plant transformation system for quinoa has not been well developed yet. Here, we established two rapid and efficient transformation systems for quinoa by using hairy roots and agroinfiltration of leaves, which provide useful tools for quick analysis of gene function. Hairy roots were obtained from three types of explants: cotyledon-nod with hypocotyl, cotyledon itself, and hypocotyl pieces. Interestingly, explants of cotyledon-nod with hypocotyl showed the highest transformation efficiency at 67.9%, and cotyledon displayed medium efficiency at 42.2%, while hypocotyl explants with the lowest at 31.6%. We also obtained transgenic quinoa roots successfully in-vivo, which showed low efficiency but provides a potential method to test gene functions in live plants. By using young leaves for agroinfiltration, direct injection showed a better transgenic effect compared with vacuum penetration. In juxtaposition, the transformation systems using both hairy root and leaf infiltration establish an efficient and convenient way to manipulate and analyze gene functions in quinoa, and a potential strategy for transgenic quinoa.
- Open Access
- 6 November 2021
- Published by MDPI AG in International Journal of Molecular Sciences
- Vol. 22 (21) , 12017
MATE-Type Proteins Are Responsible for Isoflavone Transportation and Accumulation in Soybean Seeds
Soybeans are nutritionally important as human food and animal feed. Apart from the macronutrients such as proteins and oils, soybeans are also high in health-beneficial secondary metabolites and are uniquely enriched in isoflavones among food crops. Isoflavone biosynthesis has been relatively well characterized, but the mechanism of their transportation in soybean cells is largely unknown. Using the yeast model, we showed that GmMATE1 and GmMATE2 promoted the accumulation of isoflavones, mainly in the aglycone forms. Using the tobacco BrightYellow-2 (BY-2) cell model, GmMATE1 and GmMATE2 were found to be localized in the vacuolar membrane. Such subcellular localization supports the notion that GmMATE1 and GmMATE2 function by compartmentalizing isoflavones in the vacuole. Expression analyses showed that GmMATE1 was mainly expressed in the developing soybean pod. Soybean mutants defective in GmMATE1 had significantly reduced total seed isoflavone contents, whereas the overexpression of GmMATE1 in transgenic soybean promoted the accumulation of seed isoflavones. Our results showed that GmMATE1, and possibly also GmMATE2, are bona fide isoflavone transporters that promote the accumulation of isoflavones in soybean seeds.
- 6 November 2021
- Published by MDPI AG in International Journal of Molecular Sciences
- Vol. 22 (21) , 12017
Open AccessMATE-Type Proteins Are Responsible for Isoflavone Transportation and Accumulation in Soybean Seeds
Soybeans are nutritionally important as human food and animal feed. Apart from the macronutrients such as proteins and oils, soybeans are also high in health-beneficial secondary metabolites and are uniquely enriched in isoflavones among food crops. Isoflavone biosynthesis has been relatively well characterized, but the mechanism of their transportation in soybean cells is largely unknown. Using the yeast model, we showed that GmMATE1 and GmMATE2 promoted the accumulation of isoflavones, mainly in the aglycone forms. Using the tobacco BrightYellow-2 (BY-2) cell model, GmMATE1 and GmMATE2 were found to be localized in the vacuolar membrane. Such subcellular localization supports the notion that GmMATE1 and GmMATE2 function by compartmentalizing isoflavones in the vacuole. Expression analyses showed that GmMATE1 was mainly expressed in the developing soybean pod. Soybean mutants defective in GmMATE1 had significantly reduced total seed isoflavone contents, whereas the overexpression of GmMATE1 in transgenic soybean promoted the accumulation of seed isoflavones. Our results showed that GmMATE1, and possibly also GmMATE2, are bona fide isoflavone transporters that promote the accumulation of isoflavones in soybean seeds.
- Open Access
- 28 April 2021
- Published by Springer Nature in Research Square
The Establishment of Two Efficient Transformation Systems in Quinoa
Quinoa (Chenopodium quinoa Willd.) provides a gluten-free food with abundant nutrition and is potential to become a major crop in future. Quinoa has a lot of unique features including the high tolerance to multiple stresses, of which the underlying mechanisms may help improve other crops. Genetic manipulation will provide powerful tools to investigate the function of key genes in regulation of quinoa development and stress responses, which will further improve quinoa planting in the fields. However, the efficient transformation system for quinoa has not been well developed yet. Here, we established two rapid and efficient transformation systems for quinoa by using hairy root and leaf agroinfiltration, which provide useful tools for quick analyses of genes function in quinoa. Hairy roots were obtained from three types of explants, including cotyledon-nod with hypocotyl, cotyledon itself, and hypocotyl pieces. Interestingly, explants of cotyledon-nod with hypocotyl showed the highest transformation efficiency at 67.9%, and cotyledon displayed medium efficiency at 42.2%, while hypocotyl with the lowest at 31.6%. We also obtained transgenic quinoa roots successfully in-vivo, which showed low efficiency, but this provides a potential method to test gene function in live plants. By using young leaves for agroinfiltration, direct injection showed a better transgenic effect compared with vacuum penetration. Overall, the transformation systems using both hairy root and leaf agroinfiltration provide efficient and convenient ways to manipulate and analyse gene functions in quinoa.
- 28 April 2021
- Published by Springer Nature in Research Square
Open AccessThe Establishment of Two Efficient Transformation Systems in Quinoa
Quinoa (Chenopodium quinoa Willd.) provides a gluten-free food with abundant nutrition and is potential to become a major crop in future. Quinoa has a lot of unique features including the high tolerance to multiple stresses, of which the underlying mechanisms may help improve other crops. Genetic manipulation will provide powerful tools to investigate the function of key genes in regulation of quinoa development and stress responses, which will further improve quinoa planting in the fields. However, the efficient transformation system for quinoa has not been well developed yet. Here, we established two rapid and efficient transformation systems for quinoa by using hairy root and leaf agroinfiltration, which provide useful tools for quick analyses of genes function in quinoa. Hairy roots were obtained from three types of explants, including cotyledon-nod with hypocotyl, cotyledon itself, and hypocotyl pieces. Interestingly, explants of cotyledon-nod with hypocotyl showed the highest transformation efficiency at 67.9%, and cotyledon displayed medium efficiency at 42.2%, while hypocotyl with the lowest at 31.6%. We also obtained transgenic quinoa roots successfully in-vivo, which showed low efficiency, but this provides a potential method to test gene function in live plants. By using young leaves for agroinfiltration, direct injection showed a better transgenic effect compared with vacuum penetration. Overall, the transformation systems using both hairy root and leaf agroinfiltration provide efficient and convenient ways to manipulate and analyse gene functions in quinoa.
- Open Access
Quinoa: In Perspective of Global Challenges
The global population is on the path of an increasing trajectory with a simultaneous decline in arable land resources through salinization and desertification that have resulted mainly from climate change and other anthropogenic activities. Rising temperatures will cause changes in the entire ecosystem, resulting in significant alterations in global climate paradigms and a threat to food security. This review focuses on how the highly resilient Chenopodium quinoa Willd. can sustainably mitigate some of the detrimental impacts, such as starvation, and support or provide ecosystem services. In comparison, compared with the traditional staple food crops, quinoa has remarkable tolerance to abiotic stresses and is highly nutritious, with a unique balance and higher amounts of nutrients, and can therefore be an important crop for food security and nutritional adequacy. This crop has the potential to ameliorate global challenges with respect to increase in global population, effects of climate change, desalinization, phytoremediation, satisfying nutrient deficiency, and alleviating poverty.
Open AccessQuinoa: In Perspective of Global Challenges
The global population is on the path of an increasing trajectory with a simultaneous decline in arable land resources through salinization and desertification that have resulted mainly from climate change and other anthropogenic activities. Rising temperatures will cause changes in the entire ecosystem, resulting in significant alterations in global climate paradigms and a threat to food security. This review focuses on how the highly resilient Chenopodium quinoa Willd. can sustainably mitigate some of the detrimental impacts, such as starvation, and support or provide ecosystem services. In comparison, compared with the traditional staple food crops, quinoa has remarkable tolerance to abiotic stresses and is highly nutritious, with a unique balance and higher amounts of nutrients, and can therefore be an important crop for food security and nutritional adequacy. This crop has the potential to ameliorate global challenges with respect to increase in global population, effects of climate change, desalinization, phytoremediation, satisfying nutrient deficiency, and alleviating poverty.