Jimei Han
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Jimei Han has a total of 51 co-authors. Here are the top co-authors by number of shared publications:
- Ying Sun
School of Integrative Plant Science Soil and Crop Science Section Cornell University Ithaca NY USA
7 shared publications - Lianhong Gu
Environmental Sciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA
6 shared publications - Yong-Jiang Zhang
School of Biology and Ecology University of Maine Orono Maine USA
5 shared publications - Yang Song
Department of Hydrology and Atmospheric Sciences University of Arizona Tucson Arizona USA
4 shared publications Bernard Grodzinski
Department of Plant Agriculture University of Guelph Guelph Ontario Canada
3 shared publicationsFuliang Cao
3 shared publications
Latest Publications
- Open Access
Elevated CO2 Decouples the Short-Term Thermal Responses of Mesophyll and Stomatal Conductance, Enhancing Carbon Gain and Water Use at Moderate Heat but Failing at Extreme Temperatures
Rising atmospheric CO2 concentration and global warming jointly affect plant photosynthesis and water use, but how elevated CO2 regulates photosynthetic short-term thermal response and its implications for leaf carbon-water balance remain poorly understood. We investigated the temperature responses (25â45 °C) of net photosynthetic rate (An), intrinsic water use efficiency (iWUE), stomatal conductance (gs), and mesophyll conductance (gm) in Liriodendron tulipifera L., a fast-growing and economically important hardwood species sensitive to heat stress, under five CO2 concentrations (150â800 Îźmol molâ1), and quantified the partitioning of stomatal, mesophyll, and biochemical limitations. Elevated CO2 increased the optimal temperature (Topt) of An, iWUE, and gm, but decreased that of gs, creating a divergent thermal response pattern that decoupled carbon acquisition from water loss. The upward shift in the Topt of gm enhanced CO2 supply to chloroplast carboxylation sites at high temperatures, sustaining higher carboxylation rates, indicating that improved mesophyll diffusion, rather than biochemical capacity, drove photosynthetic short-term thermal response. The downward shift in Topt of gs aligned with optimal stomatal behavior theory, promoting earlier stomatal closure to conserve water, which together with enhanced mesophyll diffusion resulted in a net improvement in water use efficiency below 40 °C. At 45 °C, however, mesophyll limitation (lm) became dominant (~70% of total limitation), indicating that elevated CO2 cannot prevent photosynthetic breakdown under extreme heat, and the water-saving benefit was lost. We suggest that terrestrial biosphere models incorporating separate temperature dependencies of gm and gs would improve predictions of tree carbon-water balance under future climates.
Open AccessElevated CO2 Decouples the Short-Term Thermal Responses of Mesophyll and Stomatal Conductance, Enhancing Carbon Gain and Water Use at Moderate Heat but Failing at Extreme Temperatures
Rising atmospheric CO2 concentration and global warming jointly affect plant photosynthesis and water use, but how elevated CO2 regulates photosynthetic short-term thermal response and its implications for leaf carbon-water balance remain poorly understood. We investigated the temperature responses (25â45 °C) of net photosynthetic rate (An), intrinsic water use efficiency (iWUE), stomatal conductance (gs), and mesophyll conductance (gm) in Liriodendron tulipifera L., a fast-growing and economically important hardwood species sensitive to heat stress, under five CO2 concentrations (150â800 Îźmol molâ1), and quantified the partitioning of stomatal, mesophyll, and biochemical limitations. Elevated CO2 increased the optimal temperature (Topt) of An, iWUE, and gm, but decreased that of gs, creating a divergent thermal response pattern that decoupled carbon acquisition from water loss. The upward shift in the Topt of gm enhanced CO2 supply to chloroplast carboxylation sites at high temperatures, sustaining higher carboxylation rates, indicating that improved mesophyll diffusion, rather than biochemical capacity, drove photosynthetic short-term thermal response. The downward shift in Topt of gs aligned with optimal stomatal behavior theory, promoting earlier stomatal closure to conserve water, which together with enhanced mesophyll diffusion resulted in a net improvement in water use efficiency below 40 °C. At 45 °C, however, mesophyll limitation (lm) became dominant (~70% of total limitation), indicating that elevated CO2 cannot prevent photosynthetic breakdown under extreme heat, and the water-saving benefit was lost. We suggest that terrestrial biosphere models incorporating separate temperature dependencies of gm and gs would improve predictions of tree carbon-water balance under future climates.
- Open Access
- 28 February 2026
- Published by Elsevier in Plant Phenomics
- Vol. 8  (1)
Conditional reliability of chlorophyll fluorescence for inferring photosynthesis in Ginkgo biloba: evidence from fluctuating light and drought conditions
- 28 February 2026
- Published by Elsevier in Plant Phenomics
- Vol. 8  (1)
Open AccessConditional reliability of chlorophyll fluorescence for inferring photosynthesis in Ginkgo biloba: evidence from fluctuating light and drought conditions
- Open Access
Compensatory Regulation and Temporal Dynamics of Photosynthetic Limitations in Ginkgo Biloba Under Combined DroughtâSalt Stress
Photosynthesis in higher plants is highly sensitive to drought and salinity. While studies have examined the individual effects of drought or salt stress on photosynthesis, their combined impact remains poorly understood. In this study, we investigated the diurnal dynamics and primary limiting factors (stomatal, mesophyll, and biochemical) affecting the net photosynthetic rate (An) in Ginkgo (G.) biloba under drought, salt, and combined droughtâsalt stress. The results revealed that G. biloba exhibited a bimodal pattern of An under control conditions, primarily driven by mesophyll conductance (gm). Under drought, this pattern shifted, with stomatal limitations dominant in the late afternoon. In contrast, salt and combined stress induced a unimodal An pattern due to a flattened gm curve and reduced correlation between gm and An. Interestingly, combined stress caused significantly lower mesophyll limitations than salt stress alone, compensating for increased stomatal limitations and leading to a higher An. Our findings reveal a dynamic shift in the limiting factors over time and stress types, suggesting that G. biloba has mechanisms to mitigate combined droughtâsalt stress. These insights deepen our understanding of plant resilience under complex environmental conditions.
Open AccessCompensatory Regulation and Temporal Dynamics of Photosynthetic Limitations in Ginkgo Biloba Under Combined DroughtâSalt Stress
Photosynthesis in higher plants is highly sensitive to drought and salinity. While studies have examined the individual effects of drought or salt stress on photosynthesis, their combined impact remains poorly understood. In this study, we investigated the diurnal dynamics and primary limiting factors (stomatal, mesophyll, and biochemical) affecting the net photosynthetic rate (An) in Ginkgo (G.) biloba under drought, salt, and combined droughtâsalt stress. The results revealed that G. biloba exhibited a bimodal pattern of An under control conditions, primarily driven by mesophyll conductance (gm). Under drought, this pattern shifted, with stomatal limitations dominant in the late afternoon. In contrast, salt and combined stress induced a unimodal An pattern due to a flattened gm curve and reduced correlation between gm and An. Interestingly, combined stress caused significantly lower mesophyll limitations than salt stress alone, compensating for increased stomatal limitations and leading to a higher An. Our findings reveal a dynamic shift in the limiting factors over time and stress types, suggesting that G. biloba has mechanisms to mitigate combined droughtâsalt stress. These insights deepen our understanding of plant resilience under complex environmental conditions.
- Open Access
Monitoring Nitrogen Nutrition in Ginkgo Using Unmanned Aerial Vehicle RGB Imagery and the Gaussian Process Regression Model
Nitrogen nutrition monitoring is crucial in agriculture and forestry. With the development of Unmanned Aerial Vehicle (UAV) imaging technology, its application in nitrogen nutrition monitoring has gained attention. Traditional regression methods often struggle to accurately capture the nonlinear relationships between image features and nitrogen nutrition parameters. This study introduces Gaussian regression models to better model the relationship between UAV image features and nitrogen nutrition in Ginkgo. UAV RGB imagery of three-year-old Ginkgo biloba L. seedlings was used to extract nitrogen-related image features. Gaussian regression models were employed to select and model these features, creating regression models for nitrogen accumulation and nitrogen content in Ginkgo. The accuracy of the models was validated. Results indicated that the optimal canopy type for monitoring nitrogen accumulation in Ginkgo was the shadowed canopy, with the color feature BMR being the most important feature. For monitoring nitrogen content, sunlight and shadow canopy types were suitable, with BMR and b* being the key features. Gaussian regression demonstrated superior accuracy and robustness compared to traditional regression models. This study emphasizes the potential of Gaussian regression models to improve nitrogen monitoring through UAV imagery, offering valuable applications in precision agriculture and forestry management, particularly in supporting nitrogen fertilization and nutrition management for Ginkgo.
Open AccessMonitoring Nitrogen Nutrition in Ginkgo Using Unmanned Aerial Vehicle RGB Imagery and the Gaussian Process Regression Model
Nitrogen nutrition monitoring is crucial in agriculture and forestry. With the development of Unmanned Aerial Vehicle (UAV) imaging technology, its application in nitrogen nutrition monitoring has gained attention. Traditional regression methods often struggle to accurately capture the nonlinear relationships between image features and nitrogen nutrition parameters. This study introduces Gaussian regression models to better model the relationship between UAV image features and nitrogen nutrition in Ginkgo. UAV RGB imagery of three-year-old Ginkgo biloba L. seedlings was used to extract nitrogen-related image features. Gaussian regression models were employed to select and model these features, creating regression models for nitrogen accumulation and nitrogen content in Ginkgo. The accuracy of the models was validated. Results indicated that the optimal canopy type for monitoring nitrogen accumulation in Ginkgo was the shadowed canopy, with the color feature BMR being the most important feature. For monitoring nitrogen content, sunlight and shadow canopy types were suitable, with BMR and b* being the key features. Gaussian regression demonstrated superior accuracy and robustness compared to traditional regression models. This study emphasizes the potential of Gaussian regression models to improve nitrogen monitoring through UAV imagery, offering valuable applications in precision agriculture and forestry management, particularly in supporting nitrogen fertilization and nutrition management for Ginkgo.
- Open Access
- 26 May 2025
- Published by Wiley in Plant Direct
- Vol. 9  (5) , e70080
Regulatory Coordination of Photophysical, Photochemical, and Biochemical Reactions in the Photosynthesis of Land Plants
Balance among the sequential photophysical, photochemical, and biochemical reactions of photosynthesis is needed for converting fleeting energy in light to stable energy in chemical bonds. Any imbalance acts as either a bottleneck for limiting photosynthetic efficiency or an agent for inducing structural and functional damage to photosynthetic apparatus. Not only must each reaction be carefully regulated, but regulatory processes must also be coordinated across the reactions. However, regulations of different stages of photosynthesis have rarely been studied jointly. Nonâphotochemical quenching ( NPQ ) and stomatal conductance ( g s ) are key regulators of photophysical and biochemical reactions, respectively. Existing evidence suggests that the redox state of plastoquinone regulates g s and that the photochemical reactions are partially regulated by the ultrastructural dynamics of thylakoids induced by osmotic water fluxes in chloroplasts of land plants. To examine how these regulations are coordinated and feedback to each other, we simultaneously measured NPQ and g s and inferred the redox state of plastoquinone and the lightâinduced thylakoid swelling/shrinking on numerous C 3 and C 4 species. For all species measured, NPQ and g s covary with the redox states of the electron transport chain, particularly plastoquinone, and increase as thylakoid swelling is inferred. NPQ has the maximal sensitivity at the light intensity at which thylakoid is inferred to be fully swollen. Our findings suggest that plant energy and water use strategies are intimately linked by evolution, and studying the regulations of different photosynthetic stages as a whole can lead to new insights of the functioning of photosynthetic machinery in dynamic environments.
- 26 May 2025
- Published by Wiley in Plant Direct
- Vol. 9  (5) , e70080
Open AccessRegulatory Coordination of Photophysical, Photochemical, and Biochemical Reactions in the Photosynthesis of Land Plants
Balance among the sequential photophysical, photochemical, and biochemical reactions of photosynthesis is needed for converting fleeting energy in light to stable energy in chemical bonds. Any imbalance acts as either a bottleneck for limiting photosynthetic efficiency or an agent for inducing structural and functional damage to photosynthetic apparatus. Not only must each reaction be carefully regulated, but regulatory processes must also be coordinated across the reactions. However, regulations of different stages of photosynthesis have rarely been studied jointly. Nonâphotochemical quenching ( NPQ ) and stomatal conductance ( g s ) are key regulators of photophysical and biochemical reactions, respectively. Existing evidence suggests that the redox state of plastoquinone regulates g s and that the photochemical reactions are partially regulated by the ultrastructural dynamics of thylakoids induced by osmotic water fluxes in chloroplasts of land plants. To examine how these regulations are coordinated and feedback to each other, we simultaneously measured NPQ and g s and inferred the redox state of plastoquinone and the lightâinduced thylakoid swelling/shrinking on numerous C 3 and C 4 species. For all species measured, NPQ and g s covary with the redox states of the electron transport chain, particularly plastoquinone, and increase as thylakoid swelling is inferred. NPQ has the maximal sensitivity at the light intensity at which thylakoid is inferred to be fully swollen. Our findings suggest that plant energy and water use strategies are intimately linked by evolution, and studying the regulations of different photosynthetic stages as a whole can lead to new insights of the functioning of photosynthetic machinery in dynamic environments.
- 28 March 2025
- Published by Oxford University Press (OUP) in Tree Physiology
- Vol. 45  (4)
Estimation of mesophyll conductance in Ginkgo biloba from the PSII redox state using a machine learning approach
Mesophyll conductance (gm) has been proved to be one of the important factors limiting photosynthesis and thus affects the estimation of plant productivity and terrestrial carbon balance. However, beyond the leaf scale, gm is usually assumed to be infinite because of the unavailability of the estimating technology. In this study, we first verified the important role of gm on photosynthesis by utilizing a wide range of ginkgo (Ginkgo biloba L.) families. Then, the dataset was adopted to establish a random forest-based gm estimation approach with the drivers being selected under the guidance of several mechanistic models (e.g. ďťżFarquhar, von Caemmerer, Berry model, the mechanistic light reaction model of photosynthesis). This model exhibited high predictive accuracy, utilizing both the measured fraction of open reaction centers in PSII (qL) (R2 = 0.71, RMSE = 0.008) and the estimated qL (R2 = 0.70, RMSE = 0.008) as inputs. Since qL, a key physiological driver in the model, can be obtained from chlorophyll fluorescence of PSII (SIFPSII) using the open-closed (OC) redox model of photosynthetic electron transport, this leaf-scale model could potentially be applied beyond the leaf scale, provided that environmental data are available. Direct measurements also confirmed the close relationship between qL and gm under ambient CO2 concentration and saturated light conditions. Our findings pave the way for additional attempts to estimate gm across a variety of scales.
- 28 March 2025
- Published by Oxford University Press (OUP) in Tree Physiology
- Vol. 45  (4)
Estimation of mesophyll conductance in Ginkgo biloba from the PSII redox state using a machine learning approach
Mesophyll conductance (gm) has been proved to be one of the important factors limiting photosynthesis and thus affects the estimation of plant productivity and terrestrial carbon balance. However, beyond the leaf scale, gm is usually assumed to be infinite because of the unavailability of the estimating technology. In this study, we first verified the important role of gm on photosynthesis by utilizing a wide range of ginkgo (Ginkgo biloba L.) families. Then, the dataset was adopted to establish a random forest-based gm estimation approach with the drivers being selected under the guidance of several mechanistic models (e.g. ďťżFarquhar, von Caemmerer, Berry model, the mechanistic light reaction model of photosynthesis). This model exhibited high predictive accuracy, utilizing both the measured fraction of open reaction centers in PSII (qL) (R2 = 0.71, RMSE = 0.008) and the estimated qL (R2 = 0.70, RMSE = 0.008) as inputs. Since qL, a key physiological driver in the model, can be obtained from chlorophyll fluorescence of PSII (SIFPSII) using the open-closed (OC) redox model of photosynthetic electron transport, this leaf-scale model could potentially be applied beyond the leaf scale, provided that environmental data are available. Direct measurements also confirmed the close relationship between qL and gm under ambient CO2 concentration and saturated light conditions. Our findings pave the way for additional attempts to estimate gm across a variety of scales.
- Open Access
- 12 February 2025
- Published by Frontiers Media SA in Frontiers in Plant Science
- Vol. 16, 1557412
Leaf nitrogen allocation to non-photosynthetic apparatus reduces mesophyll conductance under combined drought-salt stress in Ginkgo biloba
Leaf nitrogen allocation plays a crucial role in determining both photosynthetic function and structural development of plants. However, the effects of drought, salt stress, and their combination on leaf nitrogen allocation, and how these affect mesophyll conductance (gm) and photosynthesis, remain poorly understood. In this study, we first investigated variations in photosynthetic characteristics and leaf nitrogen allocation, and analyzed the relationship between gm and leaf nitrogen allocation ratios in Ginkgo biloba under drought, salt and combined drought-salt stress. The results showed that all stress treatments significantly reduced the photosynthesis in G. biloba, with the combined drought-salt stress having the most significant inhibitory effect on the plantâs physiological characteristics. Under combined drought-salt stress, the limitation of photosynthesis due to gm (MCL) was significantly greater than under individual drought or salt stress. In contrast, the limitation due to stomatal conductance (SL) was similar to that observed under drought but higher than under salt stress. No significant differences in biochemical limitations (BL) were found across all stress treatments. Further research suggests that the increase in MCL under combined drought-stress treatment may be linked to a greater allocation of leaf nitrogen to non-photosynthetic apparatus (e.g., cell structure) and a smaller allocation to photosynthetic enzymes (i.e., ribulose-1,5-bisphosphate carboxylase/oxygenase, Rubisco). This is supported by the positive correlation between gm and the proportion of nitrogen allocated to the carboxylation system (Pr), as well as the negative correlation with the non-photosynthetic nitrogen ratio (Pnp). These findings help to advance our understanding of the mechanisms of photosynthesis and plant adaptability under combined drought-salt stress.
- 12 February 2025
- Published by Frontiers Media SA in Frontiers in Plant Science
- Vol. 16, 1557412
Open AccessLeaf nitrogen allocation to non-photosynthetic apparatus reduces mesophyll conductance under combined drought-salt stress in Ginkgo biloba
Leaf nitrogen allocation plays a crucial role in determining both photosynthetic function and structural development of plants. However, the effects of drought, salt stress, and their combination on leaf nitrogen allocation, and how these affect mesophyll conductance (gm) and photosynthesis, remain poorly understood. In this study, we first investigated variations in photosynthetic characteristics and leaf nitrogen allocation, and analyzed the relationship between gm and leaf nitrogen allocation ratios in Ginkgo biloba under drought, salt and combined drought-salt stress. The results showed that all stress treatments significantly reduced the photosynthesis in G. biloba, with the combined drought-salt stress having the most significant inhibitory effect on the plantâs physiological characteristics. Under combined drought-salt stress, the limitation of photosynthesis due to gm (MCL) was significantly greater than under individual drought or salt stress. In contrast, the limitation due to stomatal conductance (SL) was similar to that observed under drought but higher than under salt stress. No significant differences in biochemical limitations (BL) were found across all stress treatments. Further research suggests that the increase in MCL under combined drought-stress treatment may be linked to a greater allocation of leaf nitrogen to non-photosynthetic apparatus (e.g., cell structure) and a smaller allocation to photosynthetic enzymes (i.e., ribulose-1,5-bisphosphate carboxylase/oxygenase, Rubisco). This is supported by the positive correlation between gm and the proportion of nitrogen allocated to the carboxylation system (Pr), as well as the negative correlation with the non-photosynthetic nitrogen ratio (Pnp). These findings help to advance our understanding of the mechanisms of photosynthesis and plant adaptability under combined drought-salt stress.
- 5 April 2023
- Published by Wiley in Plant, Cell & Environment
- Vol. 46  (5)
Cover Image
- Open Access
- 19 February 2023
- Published by Wiley in Plant, Cell & Environment
- Vol. 46  (5) , 1540-1561
An exploratory steadyâstate redox model of photosynthetic linear electron transport for use in complete modelling of photosynthesis for broad applications
A photochemical model of photosynthetic electron transport (PET) is needed to integrate photophysics, photochemistry, and biochemistry to determine redox conditions of electron carriers and enzymes for plant stress assessment and mechanistically link sunâinduced chlorophyll fluorescence to carbon assimilation for remotely sensing photosynthesis. Towards this goal, we derived photochemical equations governing the states and redox reactions of complexes and electron carriers along the PET chain. These equations allow the redox conditions of the mobile plastoquinone pool and the cytochrome b6f complex (Cyt) to be inferred with typical fluorometry. The equations agreed well with fluorometry measurements from diverse C3/C4species across environments in the relationship between the PET rate and fraction of open photosystem II reaction centres. We found the oxidation of plastoquinol by Cyt is the bottleneck of PET, and genetically improving the oxidation of plastoquinol by Cyt may enhance the efficiency of PET and photosynthesis across species. Redox reactions and photochemical and biochemical interactions are highly redundant in their complex controls of PET. Although individual reaction rate constants cannot be resolved, they appear in parameter groups which can be collectively inferred with fluorometry measurements for broad applications. The new photochemical model developed enables advances in different fronts of photosynthesis research.
- 19 February 2023
- Published by Wiley in Plant, Cell & Environment
- Vol. 46  (5) , 1540-1561
Open AccessAn exploratory steadyâstate redox model of photosynthetic linear electron transport for use in complete modelling of photosynthesis for broad applications
A photochemical model of photosynthetic electron transport (PET) is needed to integrate photophysics, photochemistry, and biochemistry to determine redox conditions of electron carriers and enzymes for plant stress assessment and mechanistically link sunâinduced chlorophyll fluorescence to carbon assimilation for remotely sensing photosynthesis. Towards this goal, we derived photochemical equations governing the states and redox reactions of complexes and electron carriers along the PET chain. These equations allow the redox conditions of the mobile plastoquinone pool and the cytochrome b6f complex (Cyt) to be inferred with typical fluorometry. The equations agreed well with fluorometry measurements from diverse C3/C4species across environments in the relationship between the PET rate and fraction of open photosystem II reaction centres. We found the oxidation of plastoquinol by Cyt is the bottleneck of PET, and genetically improving the oxidation of plastoquinol by Cyt may enhance the efficiency of PET and photosynthesis across species. Redox reactions and photochemical and biochemical interactions are highly redundant in their complex controls of PET. Although individual reaction rate constants cannot be resolved, they appear in parameter groups which can be collectively inferred with fluorometry measurements for broad applications. The new photochemical model developed enables advances in different fronts of photosynthesis research.
- Open Access
- 3 August 2022
- Published by Wiley in New Phytologist
- Vol. 236  (2) , 319-329
Granal thylakoid structure and function: explaining an enduring mystery of higher plants
Summary: In higher plants, photosystems II and I are found in grana stacks and unstacked stroma lamellae, respectively. To connect them, electron carriers negotiate tortuous multiâmedia paths and are subject to macromolecular blocking. Why does evolution select an apparently unnecessary, inefficient bipartition? Here we systematically explain this perplexing phenomenon. We propose that grana stacks, acting like bellows in accordions, increase the degree of ultrastructural control on photosynthesis through thylakoid swelling/shrinking induced by osmotic water fluxes. This control coordinates with variations in stomatal conductance and the turgor of guard cells, which act like an accordion's air button. Thylakoid ultrastructural dynamics regulate macromolecular blocking/collision probability, direct diffusional pathlengths, division of function of Cytochrome b6f complex between linear and cyclic electron transport, luminal pH via osmotic water fluxes, and the separation of pH dynamics between granal and lamellar lumens in response to environmental variations. With the two functionally asymmetrical photosystems located distantly from each other, the ultrastructural control, nonphotochemical quenching, and carbonâreaction feedbacks maximally cooperate to balance electron transport with gas exchange, provide homeostasis in fluctuating light environments, and protect photosystems in drought. Grana stacks represent a dry/high irradiance adaptation of photosynthetic machinery to improve fitness in challenging land environments. Our theory unifies many wellâknown but seemingly unconnected phenomena of thylakoid structure and function in higher plants.
- 3 August 2022
- Published by Wiley in New Phytologist
- Vol. 236  (2) , 319-329
Open AccessGranal thylakoid structure and function: explaining an enduring mystery of higher plants
Summary: In higher plants, photosystems II and I are found in grana stacks and unstacked stroma lamellae, respectively. To connect them, electron carriers negotiate tortuous multiâmedia paths and are subject to macromolecular blocking. Why does evolution select an apparently unnecessary, inefficient bipartition? Here we systematically explain this perplexing phenomenon. We propose that grana stacks, acting like bellows in accordions, increase the degree of ultrastructural control on photosynthesis through thylakoid swelling/shrinking induced by osmotic water fluxes. This control coordinates with variations in stomatal conductance and the turgor of guard cells, which act like an accordion's air button. Thylakoid ultrastructural dynamics regulate macromolecular blocking/collision probability, direct diffusional pathlengths, division of function of Cytochrome b6f complex between linear and cyclic electron transport, luminal pH via osmotic water fluxes, and the separation of pH dynamics between granal and lamellar lumens in response to environmental variations. With the two functionally asymmetrical photosystems located distantly from each other, the ultrastructural control, nonphotochemical quenching, and carbonâreaction feedbacks maximally cooperate to balance electron transport with gas exchange, provide homeostasis in fluctuating light environments, and protect photosystems in drought. Grana stacks represent a dry/high irradiance adaptation of photosynthetic machinery to improve fitness in challenging land environments. Our theory unifies many wellâknown but seemingly unconnected phenomena of thylakoid structure and function in higher plants.