Siham Yousfi
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Research Subjects
Siham Yousfi has a total of 18 co-authors. Here are the top co-authors by number of shared publications:
- Maryem Rhanoui
University Claude Bernard Lyon 1, University of Lyon
12 shared publications - Mounia Mikram
Meridian Team, LYRICA Laboratory, School of Information Sciences, Rabat 10100, Morocco
11 shared publications - Kamelia Amazian
Higher Institute of Nursing Professions and Health Technology, Fez 30050, Morocco
3 shared publications - Nour Eddine Zekaoui
School of Information Sciences
3 shared publications - Dalila Chiadmi
SIP Research Team, Ecole Mohammadia d’Ingenieurs, Mohammed V University in Rabat, Rabat, Morocco
2 shared publications - Khaoula Chtouki
LYRICA Laboratory School of Information Sciences Rabat Meridian Team Morocco
2 shared publications
Latest Publications
- 22 June 2025
- Published by Elsevier in Computers in Biology and Medicine
- Vol. 195, 110651
SSMT-PANBERT: A single-stage multitask model for phenotype extraction and assertion negation detection in unstructured clinical text
- 22 June 2025
- Published by Elsevier in Computers in Biology and Medicine
- Vol. 195, 110651
SSMT-PANBERT: A single-stage multitask model for phenotype extraction and assertion negation detection in unstructured clinical text
- 20 February 2025
- Published by Springer Nature
- p. 399-410
BioMed-LLaMa-3: Instruction-Efficient Fine-Tuning of Large Language Models for Improved Biomedical Language Understanding
- 20 February 2025
- Published by Springer Nature
- p. 399-410
BioMed-LLaMa-3: Instruction-Efficient Fine-Tuning of Large Language Models for Improved Biomedical Language Understanding
- Open Access
- 21 November 2024
- Published by MDPI AG in Journal of Imaging
- Vol. 10 (12) , 297
Multimodal Machine Learning for Predicting Post-Surgery Quality of Life in Colorectal Cancer Patients
Colorectal cancer is a major public health issue, causing significant morbidity and mortality worldwide. Treatment for colorectal cancer often has a significant impact on patients’ quality of life, which can vary over time and across individuals. The application of artificial intelligence and machine learning techniques has great potential for optimizing patient outcomes by providing valuable insights. In this paper, we propose a multimodal machine learning framework for the prediction of quality of life indicators in colorectal cancer patients at various temporal stages, leveraging both clinical data and computed tomography scan images. Additionally, we identify key predictive factors for each quality of life indicator, thereby enabling clinicians to make more informed treatment decisions and ultimately enhance patient outcomes. Our approach integrates data from multiple sources, enhancing the performance of our predictive models. The analysis demonstrates a notable improvement in accuracy for some indicators, with results for the Wexner score increasing from 24% to 48% and for the Anorectal Ultrasound score from 88% to 96% after integrating data from different modalities. These results highlight the potential of multimodal learning to provide valuable insights and improve patient care in real-world applications.
- 21 November 2024
- Published by MDPI AG in Journal of Imaging
- Vol. 10 (12) , 297
Open AccessMultimodal Machine Learning for Predicting Post-Surgery Quality of Life in Colorectal Cancer Patients
Colorectal cancer is a major public health issue, causing significant morbidity and mortality worldwide. Treatment for colorectal cancer often has a significant impact on patients’ quality of life, which can vary over time and across individuals. The application of artificial intelligence and machine learning techniques has great potential for optimizing patient outcomes by providing valuable insights. In this paper, we propose a multimodal machine learning framework for the prediction of quality of life indicators in colorectal cancer patients at various temporal stages, leveraging both clinical data and computed tomography scan images. Additionally, we identify key predictive factors for each quality of life indicator, thereby enabling clinicians to make more informed treatment decisions and ultimately enhance patient outcomes. Our approach integrates data from multiple sources, enhancing the performance of our predictive models. The analysis demonstrates a notable improvement in accuracy for some indicators, with results for the Wexner score increasing from 24% to 48% and for the Anorectal Ultrasound score from 88% to 96% after integrating data from different modalities. These results highlight the potential of multimodal learning to provide valuable insights and improve patient care in real-world applications.
- Open Access
- 1 December 2023
- Published by Institute of Advanced Engineering and Science in IAES International Journal of Artificial Intelligence (IJ-AI)
- Vol. 12 (4) , 1995-2010
Analysis of the evolution of advanced transformer-based language models: experiments on opinion mining
Opinion mining, also known as sentiment analysis, is a subfield of natural language processing (NLP) that focuses on identifying and extracting subjective information in textual material. This can include determining the overall sentiment of a piece of text (e.g., positive or negative), as well as identifying specific emotions or opinions expressed in the text, that involves the use of advanced machine and deep learning techniques. Recently, transformer-based language models make this task of human emotion analysis intuitive, thanks to the attention mechanism and parallel computation. These advantages make such models very powerful on linguistic tasks, unlike recurrent neural networks that spend a lot of time on sequential processing, making them prone to fail when it comes to processing long text. The scope of our paper aims to study the behaviour of the cutting-edge Transformer-based language models on opinion mining and provide a high-level comparison between them to highlight their key particularities. Additionally, our comparative study shows leads and paves the way for production engineers regarding the approach to focus on and is useful for researchers as it provides guidelines for future research subjects.
- 1 December 2023
- Published by Institute of Advanced Engineering and Science in IAES International Journal of Artificial Intelligence (IJ-AI)
- Vol. 12 (4) , 1995-2010
Open AccessAnalysis of the evolution of advanced transformer-based language models: experiments on opinion mining
Opinion mining, also known as sentiment analysis, is a subfield of natural language processing (NLP) that focuses on identifying and extracting subjective information in textual material. This can include determining the overall sentiment of a piece of text (e.g., positive or negative), as well as identifying specific emotions or opinions expressed in the text, that involves the use of advanced machine and deep learning techniques. Recently, transformer-based language models make this task of human emotion analysis intuitive, thanks to the attention mechanism and parallel computation. These advantages make such models very powerful on linguistic tasks, unlike recurrent neural networks that spend a lot of time on sequential processing, making them prone to fail when it comes to processing long text. The scope of our paper aims to study the behaviour of the cutting-edge Transformer-based language models on opinion mining and provide a high-level comparison between them to highlight their key particularities. Additionally, our comparative study shows leads and paves the way for production engineers regarding the approach to focus on and is useful for researchers as it provides guidelines for future research subjects.
- Open Access
- 1 August 2023
- Published by Institute of Advanced Engineering and Science in International Journal of Electrical and Computer Engineering (IJECE)
- Vol. 13 (4) , 4649-4660
Towards a new intelligent traffic system based on deep learning and data integration
Time series forecasting is an important technique to study the behavior of temporal data in order to forecast the future values, which is widely applied in intelligent traffic systems (ITS). In this paper, several deep learning models were designed to deal with the multivariate time series forecasting problem for the purpose of long-term predicting traffic volume. Simulation results showed that the best forecasts are obtained with the use of two hidden long short-term memory (LSTM) layers: the first with 64 neurons and the second with 32 neurons. Over 93% of the forecasts were made with less than ±2.0% error. The analysis of variances is mainly due to peaks in some extreme conditions. For this purpose, the data was then merged between two different sources: electromagnetic loops and cameras. Data fusion is based on a calibration of the reliability of the sources according to the visibility conditions and time of the day. The integration results were then compared with the real data to prove the improvement of the prediction results in peak periods after the data fusion step.
- 1 August 2023
- Published by Institute of Advanced Engineering and Science in International Journal of Electrical and Computer Engineering (IJECE)
- Vol. 13 (4) , 4649-4660
Open AccessTowards a new intelligent traffic system based on deep learning and data integration
Time series forecasting is an important technique to study the behavior of temporal data in order to forecast the future values, which is widely applied in intelligent traffic systems (ITS). In this paper, several deep learning models were designed to deal with the multivariate time series forecasting problem for the purpose of long-term predicting traffic volume. Simulation results showed that the best forecasts are obtained with the use of two hidden long short-term memory (LSTM) layers: the first with 64 neurons and the second with 32 neurons. Over 93% of the forecasts were made with less than ±2.0% error. The analysis of variances is mainly due to peaks in some extreme conditions. For this purpose, the data was then merged between two different sources: electromagnetic loops and cameras. Data fusion is based on a calibration of the reliability of the sources according to the visibility conditions and time of the day. The integration results were then compared with the real data to prove the improvement of the prediction results in peak periods after the data fusion step.
- 25 July 2023
- Published by Springer Nature
- p. 321-331
Deep Learning-Based Multi-task Approach for Neuronal Cells Classification and Segmentation
- 25 July 2023
- Published by Springer Nature
- p. 321-331
Deep Learning-Based Multi-task Approach for Neuronal Cells Classification and Segmentation
- Open Access
Supervised Machine Learning for Breast Cancer Risk Factors Analysis and Survival Prediction
The choice of the most effective treatment may eventually be influenced by breast cancer survival prediction. To predict the chances of a patient surviving, a variety of techniques were employed, such as statistical, machine learning, and deep learning models. In the current study, 1904 patient records from the METABRIC dataset were utilized to predict a 5-year breast cancer survival using a machine learning approach. In this study, we compare the outcomes of seven classification models to evaluate how well they perform using the following metrics: recall, AUC, confusion matrix, accuracy, precision, false positive rate, and true positive rate. The findings demonstrate that the classifiers for Logistic Regression (LR), Support Vector Machines (SVM), Decision Tree (DT), Random Forest (RD), Extremely Randomized Trees (ET), K-Nearest Neighbor (KNN), and Adaptive Boosting (AdaBoost) can accurately predict the survival rate of the tested samples, which is 75,4\%, 74,7\%, 71,5\%, 75,5\%, 70,3\%, and 78 percent.
Open AccessSupervised Machine Learning for Breast Cancer Risk Factors Analysis and Survival Prediction
The choice of the most effective treatment may eventually be influenced by breast cancer survival prediction. To predict the chances of a patient surviving, a variety of techniques were employed, such as statistical, machine learning, and deep learning models. In the current study, 1904 patient records from the METABRIC dataset were utilized to predict a 5-year breast cancer survival using a machine learning approach. In this study, we compare the outcomes of seven classification models to evaluate how well they perform using the following metrics: recall, AUC, confusion matrix, accuracy, precision, false positive rate, and true positive rate. The findings demonstrate that the classifiers for Logistic Regression (LR), Support Vector Machines (SVM), Decision Tree (DT), Random Forest (RD), Extremely Randomized Trees (ET), K-Nearest Neighbor (KNN), and Adaptive Boosting (AdaBoost) can accurately predict the survival rate of the tested samples, which is 75,4\%, 74,7\%, 71,5\%, 75,5\%, 70,3\%, and 78 percent.
- 29 March 2023
- Published by Springer Nature
- p. 59-71
Supervised Machine Learning for Breast Cancer Risk Factors Analysis and Survival Prediction
- 29 March 2023
- Published by Springer Nature
- p. 59-71
Supervised Machine Learning for Breast Cancer Risk Factors Analysis and Survival Prediction
- Open Access
- 1 December 2019
- Published by Institute of Advanced Engineering and Science in IAES International Journal of Artificial Intelligence (IJ-AI)
- Vol. 8 (4) , 317-327
Forecasting Financial Budget Time Series: ARIMA Random Walk vs LSTM Neural Network
Financial time series are volatile, non-stationary and non-linear data that are affected by external economic factors. There is several performant predictive approaches such as univariate ARIMA model and more recently Recurrent Neural Network. The accurate forecasting of budget data is a strategic and challenging task for an optimal management of resources, it requires the use of the most accurate model. We propose a predictive approach that uses and compares the Machine Learning ARIMA model and Deep Learning Recurrent LSTM model. The application and the comparative analysis shows that the LSTM model outperforms the ARIMA model, mainly thanks to the LSTMs ability to learn non-linear relationship from data.
- 1 December 2019
- Published by Institute of Advanced Engineering and Science in IAES International Journal of Artificial Intelligence (IJ-AI)
- Vol. 8 (4) , 317-327
Open AccessForecasting Financial Budget Time Series: ARIMA Random Walk vs LSTM Neural Network
Financial time series are volatile, non-stationary and non-linear data that are affected by external economic factors. There is several performant predictive approaches such as univariate ARIMA model and more recently Recurrent Neural Network. The accurate forecasting of budget data is a strategic and challenging task for an optimal management of resources, it requires the use of the most accurate model. We propose a predictive approach that uses and compares the Machine Learning ARIMA model and Deep Learning Recurrent LSTM model. The application and the comparative analysis shows that the LSTM model outperforms the ARIMA model, mainly thanks to the LSTMs ability to learn non-linear relationship from data.
- Top Cited PapersOpen Access
- 25 July 2019
- Published by MDPI AG in Machine Learning and Knowledge Extraction
- Vol. 1 (3) , 832-847
A CNN-BiLSTM Model for Document-Level Sentiment Analysis
Document-level sentiment analysis is a challenging task given the large size of the text, which leads to an abundance of words and opinions, at times contradictory, in the same document. This analysis is particularly useful in analyzing press articles and blog posts about a particular product or company, and it requires a high concentration, especially when the topic being discussed is sensitive. Nevertheless, most existing models and techniques are designed to process short text from social networks and collaborative platforms. In this paper, we propose a combination of Convolutional Neural Networks (CNN) and Bidirectional Long Short-Term Memory (BiLSTM) models, with Doc2vec embedding, suitable for opinion analysis in long texts. The CNN-BiLSTM model is compared with CNN, LSTM, BiLSTM and CNN-LSTM models with Word2vec/Doc2vec embeddings. The Doc2vec with CNN-BiLSTM model was applied on French newspapers articles and outperformed the other models with 90.66% accuracy.
- 25 July 2019
- Published by MDPI AG in Machine Learning and Knowledge Extraction
- Vol. 1 (3) , 832-847
Top Cited PapersOpen AccessA CNN-BiLSTM Model for Document-Level Sentiment Analysis
Document-level sentiment analysis is a challenging task given the large size of the text, which leads to an abundance of words and opinions, at times contradictory, in the same document. This analysis is particularly useful in analyzing press articles and blog posts about a particular product or company, and it requires a high concentration, especially when the topic being discussed is sensitive. Nevertheless, most existing models and techniques are designed to process short text from social networks and collaborative platforms. In this paper, we propose a combination of Convolutional Neural Networks (CNN) and Bidirectional Long Short-Term Memory (BiLSTM) models, with Doc2vec embedding, suitable for opinion analysis in long texts. The CNN-BiLSTM model is compared with CNN, LSTM, BiLSTM and CNN-LSTM models with Word2vec/Doc2vec embeddings. The Doc2vec with CNN-BiLSTM model was applied on French newspapers articles and outperformed the other models with 90.66% accuracy.