Bart Eduard Vos
Current Organizations / Institutes
The organizations/institutes from the scholar's latest article
Previous Organizations / Institutes
The organizations / institutes from the scholar's other articles in the past ten years
Research Subjects
Bart Eduard Vos has a total of 227 co-authors. Here are the top co-authors by number of shared publications:
- Timo Betz
Third Institute of Physics, University of Göttingen, Göttingen, Germany
16 shared publications - Gijsje Hendrika Koenderink
Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands
11 shared publications Nicholas A. Kurniawan
AMOLF Biological Soft Matter group Amsterdam The Netherlands
4 shared publications- Erez Raz
Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster, 48149 Münster, Germany
3 shared publications - Federica Burla
Biological Soft Matter Group, Department of Living Matter, AMOLF, 1098 XG Amsterdam, The Netherlands
3 shared publications - Frederick C. MacKintosh
Rice University
3 shared publications
Latest Publications
- Open Access
Structural order emerges without mechanical order inside living cells
Intracellular organization is vital for cell function, and disruption of organelle positioning is connected to severe diseases, such as cancer. Given the small length scale of cells and the importance of Brownian motion, maintaining intracellular organization requires mechanical interactions to remain stable. Here, we test the common view that intracellular organization is reflected in intracellular mechanical properties. Using the recently introduced active mechanical fingerprint, we quantify intracellular mechanical properties and active forces to create mechanical maps of patterned RPE1 cells. The organization of actin, microtubules, the Golgi apparatus, the endoplasmic reticulum, and the nucleus reveals pronounced structural polarization across the cell population. To overcome limitations of simple averages, we use a Wasserstein barycenter to calculate an optimal intracellular organization that explains all measurements with minimal cellular distortion. To our surprise, and in contrast to previous reports, we find neither a statistically significant spatial mechanical pattern nor any relevant correlation between the tested structures and intracellular mechanical properties. While there is clear local mechanical anisotropy, the large heterogeneity of mechanical values outweighs any intracellular mechanical gradient. This is further supported by large cell-to-cell variability. Thus, despite having the same genome, cells function properly while their intracellular mechanical properties vary over two orders of magnitude.
Open AccessStructural order emerges without mechanical order inside living cells
Intracellular organization is vital for cell function, and disruption of organelle positioning is connected to severe diseases, such as cancer. Given the small length scale of cells and the importance of Brownian motion, maintaining intracellular organization requires mechanical interactions to remain stable. Here, we test the common view that intracellular organization is reflected in intracellular mechanical properties. Using the recently introduced active mechanical fingerprint, we quantify intracellular mechanical properties and active forces to create mechanical maps of patterned RPE1 cells. The organization of actin, microtubules, the Golgi apparatus, the endoplasmic reticulum, and the nucleus reveals pronounced structural polarization across the cell population. To overcome limitations of simple averages, we use a Wasserstein barycenter to calculate an optimal intracellular organization that explains all measurements with minimal cellular distortion. To our surprise, and in contrast to previous reports, we find neither a statistically significant spatial mechanical pattern nor any relevant correlation between the tested structures and intracellular mechanical properties. While there is clear local mechanical anisotropy, the large heterogeneity of mechanical values outweighs any intracellular mechanical gradient. This is further supported by large cell-to-cell variability. Thus, despite having the same genome, cells function properly while their intracellular mechanical properties vary over two orders of magnitude.
- Open Access
- 17 September 2026
- Published by Elsevier in Biophysical Journal
Zebrafish embryos are robust to local mechanical perturbations
- 17 September 2026
- Published by Elsevier in Biophysical Journal
Open AccessZebrafish embryos are robust to local mechanical perturbations
- Open Access
Zebrafish embryos are robust to mechanical perturbations
The investigation of morphogenesis during organism development has massively benefited from the interaction between developmental biology and biophysics, which gave new quantitative insights into nature’s physical working principles. The process of zebrafish epiboly provides a beautiful model system as cells exhibit collective migration, meanwhile requiring symmetry breaking for gastrulation and the subsequent tissue differentiation. These elegantly robust processes are facilitated by both biochemical and mechanical cues. Here we test the hypothesis that the future body axis is robust against mechanical perturbations of tissue flow and tissue stress fields. For this, we trigger tissue flow by photoablation, which leads to an externally enforced symmetry breaking before natural symmetry breaking of gastrulation occurs. Using 3D light sheet microscopy, we obtained nuclei trajectories as a proxy for the migration of individual cells. Analyzing the derived tissue velocity field, we observed that epiboly is highly robust and mostly unaffected by ablation damage. However, the photoablation induced a convergent motion of cells towards an azimuthal angle resembling shield formation. We extensively characterized this convergent motion and checked if this tissue flow is able to reorient natural symmetry breaking during shield formation. While ablations can transiently disrupt or reorient the convergent motion, we cannot confirm any redirection of the location where the future body axis of the animal develops. The observations were also highly dependent on the developmental stage of the embryo, which cast a greater and more permanent impact, suggesting strong control exerted by factors other than mechanical signals. Significance statement: Morphogenesis emerges from the interplay between biochemical patterning and mechanical forces, yet the extent to which mechanical cues influence embryo developmental remains unclear. Using zebrafish epiboly as model system, we imposed controlled mechanical perturbations through targeted photoablation and tracking resulting 3D cell movements. We show that although ablations generate transient convergent motions, epiboly is remarkably robust to externally induced tissue flows. Our findings indicate that the future body axis is strongly buffered against mechanical disturbances, highlighting the dominant role of developmental stage and non-mechanical cues in guiding development.
Open AccessZebrafish embryos are robust to mechanical perturbations
The investigation of morphogenesis during organism development has massively benefited from the interaction between developmental biology and biophysics, which gave new quantitative insights into nature’s physical working principles. The process of zebrafish epiboly provides a beautiful model system as cells exhibit collective migration, meanwhile requiring symmetry breaking for gastrulation and the subsequent tissue differentiation. These elegantly robust processes are facilitated by both biochemical and mechanical cues. Here we test the hypothesis that the future body axis is robust against mechanical perturbations of tissue flow and tissue stress fields. For this, we trigger tissue flow by photoablation, which leads to an externally enforced symmetry breaking before natural symmetry breaking of gastrulation occurs. Using 3D light sheet microscopy, we obtained nuclei trajectories as a proxy for the migration of individual cells. Analyzing the derived tissue velocity field, we observed that epiboly is highly robust and mostly unaffected by ablation damage. However, the photoablation induced a convergent motion of cells towards an azimuthal angle resembling shield formation. We extensively characterized this convergent motion and checked if this tissue flow is able to reorient natural symmetry breaking during shield formation. While ablations can transiently disrupt or reorient the convergent motion, we cannot confirm any redirection of the location where the future body axis of the animal develops. The observations were also highly dependent on the developmental stage of the embryo, which cast a greater and more permanent impact, suggesting strong control exerted by factors other than mechanical signals. Significance statement: Morphogenesis emerges from the interplay between biochemical patterning and mechanical forces, yet the extent to which mechanical cues influence embryo developmental remains unclear. Using zebrafish epiboly as model system, we imposed controlled mechanical perturbations through targeted photoablation and tracking resulting 3D cell movements. We show that although ablations generate transient convergent motions, epiboly is remarkably robust to externally induced tissue flows. Our findings indicate that the future body axis is strongly buffered against mechanical disturbances, highlighting the dominant role of developmental stage and non-mechanical cues in guiding development.
- Open Access
- 18 August 2025
- Published by Elsevier in Biophysical Journal
- Vol. 125 (12) , 2978-2990
Direct mechanical communication of cellular to nuclear shapes in oocytes
- 18 August 2025
- Published by Elsevier in Biophysical Journal
- Vol. 125 (12) , 2978-2990
Open AccessDirect mechanical communication of cellular to nuclear shapes in oocytes
- Open Access
Direct mechanical communication of cellular to nuclear shape in oocytes
The mechanical properties of the cytoplasm and nucleoplasm are crucial for the correct and robust functioning of a cell and play a key role in understanding how mechanical signals are transferred to the nucleus. Here, we demonstrate remarkable shape mimicry between the cellular and nuclear shape of oocytes, following the externally applied deformation without direct contact between the cell cortex and the nucleus. This effect arises from a surprisingly soft and fluid-like nucleoplasm that is barely resisting any external strain, while the viscoelastic cytoplasm drives shape transmission. Comparative studies in jellyfish, starfish, and mouse oocytes reveal that lower cytoplasmic elasticity in jellyfish leads to reduced nuclear shape mimicry, highlighting the role of cytoplasmic mechanics in nuclear deformation. Significance Statement: Mechanosensing of the nucleus is, in addition to chemical signalling, an important factor in gene expression. Although nuclei are often thought to be rigid inclusions in the cytoplasm of a cell, we show that in oocytes nuclei are much more deformable. Using a combination of intranuclear, intracellular and extracellular measurements, we attribute our findings to a fine balance between the soft nucleoplasm surrounded by an elastic shell and the viscoelastic properties of the cytoplasm.
Open AccessDirect mechanical communication of cellular to nuclear shape in oocytes
The mechanical properties of the cytoplasm and nucleoplasm are crucial for the correct and robust functioning of a cell and play a key role in understanding how mechanical signals are transferred to the nucleus. Here, we demonstrate remarkable shape mimicry between the cellular and nuclear shape of oocytes, following the externally applied deformation without direct contact between the cell cortex and the nucleus. This effect arises from a surprisingly soft and fluid-like nucleoplasm that is barely resisting any external strain, while the viscoelastic cytoplasm drives shape transmission. Comparative studies in jellyfish, starfish, and mouse oocytes reveal that lower cytoplasmic elasticity in jellyfish leads to reduced nuclear shape mimicry, highlighting the role of cytoplasmic mechanics in nuclear deformation. Significance Statement: Mechanosensing of the nucleus is, in addition to chemical signalling, an important factor in gene expression. Although nuclei are often thought to be rigid inclusions in the cytoplasm of a cell, we show that in oocytes nuclei are much more deformable. Using a combination of intranuclear, intracellular and extracellular measurements, we attribute our findings to a fine balance between the soft nucleoplasm surrounded by an elastic shell and the viscoelastic properties of the cytoplasm.
- Open Access
Intracellular mechanical fingerprint reveals cell type-specific mechanical differences
Living cells are complex entities that perform various tasks with astonishing robustness. While the direct dependence of biological processes on controlled protein expression is well established, we have only begun to understand how intracellular mechanical characteristics guide and support biological function. This is in stark contrast to the expected functional role that intracellular mechanical properties should have for many core cellular functions such as organization, homeostasis, and transport. From a mechanical point of view, cells are complex viscoelastic materials that are continuously driven out of thermodynamic equilibrium, which makes both a physical measurement and mathematical modeling of their properties difficult. Here, we define a “mechanical fingerprint” that can not only characterize the intracellular mechanical state, but also carve out the mechanical differences between cell types with the potential to relate these to proper cell function. By analyzing the frequency-dependent viscoelastic properties and intracellular activity of cells using microrheology, we distilled the complex active mechanical state into just 6 parameters that comprise the mechanical fingerprint. The systematic investigation of the fingerprint illustrates a parameter tuning that could be related to functional cellular requirements. However, the full potential of the mechanical fingerprint is given by a statistical analysis of its parameters across all investigated cell types, which suggests that cells can modify mechanical parameters in a correlated way to position their intracellular mechanical properties within a well-defined phase-space that is spanned between activity, mechanical resistance, and fluidity. This paves the way for a systematic study of the interdependence of biological function and intracellular active mechanics.
Open AccessIntracellular mechanical fingerprint reveals cell type-specific mechanical differences
Living cells are complex entities that perform various tasks with astonishing robustness. While the direct dependence of biological processes on controlled protein expression is well established, we have only begun to understand how intracellular mechanical characteristics guide and support biological function. This is in stark contrast to the expected functional role that intracellular mechanical properties should have for many core cellular functions such as organization, homeostasis, and transport. From a mechanical point of view, cells are complex viscoelastic materials that are continuously driven out of thermodynamic equilibrium, which makes both a physical measurement and mathematical modeling of their properties difficult. Here, we define a “mechanical fingerprint” that can not only characterize the intracellular mechanical state, but also carve out the mechanical differences between cell types with the potential to relate these to proper cell function. By analyzing the frequency-dependent viscoelastic properties and intracellular activity of cells using microrheology, we distilled the complex active mechanical state into just 6 parameters that comprise the mechanical fingerprint. The systematic investigation of the fingerprint illustrates a parameter tuning that could be related to functional cellular requirements. However, the full potential of the mechanical fingerprint is given by a statistical analysis of its parameters across all investigated cell types, which suggests that cells can modify mechanical parameters in a correlated way to position their intracellular mechanical properties within a well-defined phase-space that is spanned between activity, mechanical resistance, and fluidity. This paves the way for a systematic study of the interdependence of biological function and intracellular active mechanics.
- Open Access
- 23 June 2023
- Published by Springer Nature in Nature Communications
- Vol. 14 (1) , 1-12
Rapid and reversible optical switching of cell membrane area by an amphiphilic azobenzene
Cellular membrane area is a key parameter for any living cell that is tightly regulated to avoid membrane damage. Changes in area-to-volume ratio are known to be critical for cell shape, but are mostly investigated by changing the cell volume via osmotic shocks. In turn, many important questions relating to cellular shape, membrane tension homeostasis and local membrane area cannot be easily addressed because experimental tools for controlled modulation of cell membrane area are lacking. Here we show that photoswitching an amphiphilic azobenzene can trigger its intercalation into the plasma membrane of various mammalian cells ranging from erythrocytes to myoblasts and cancer cells. The photoisomerization leads to a rapid (250-500 ms) and highly reversible membrane area change (ca 2 % for erythrocytes) that triggers a dramatic shape modulation of living cells.
- 23 June 2023
- Published by Springer Nature in Nature Communications
- Vol. 14 (1) , 1-12
Open AccessRapid and reversible optical switching of cell membrane area by an amphiphilic azobenzene
Cellular membrane area is a key parameter for any living cell that is tightly regulated to avoid membrane damage. Changes in area-to-volume ratio are known to be critical for cell shape, but are mostly investigated by changing the cell volume via osmotic shocks. In turn, many important questions relating to cellular shape, membrane tension homeostasis and local membrane area cannot be easily addressed because experimental tools for controlled modulation of cell membrane area are lacking. Here we show that photoswitching an amphiphilic azobenzene can trigger its intercalation into the plasma membrane of various mammalian cells ranging from erythrocytes to myoblasts and cancer cells. The photoisomerization leads to a rapid (250-500 ms) and highly reversible membrane area change (ca 2 % for erythrocytes) that triggers a dramatic shape modulation of living cells.
- Top Cited PapersOpen Access
- 1 April 2023
- Published by IOP Publishing in Journal of Physics: Photonics
- Vol. 5 (2) , 022501
Roadmap for optical tweezers
Optical tweezers are tools made of light that enable contactless pushing, trapping, and manipulation of objects, ranging from atoms to space light sails. Since the pioneering work by Arthur Ashkin in the 1970s, optical tweezers have evolved into sophisticated instruments and have been employed in a broad range of applications in the life sciences, physics, and engineering. These include accurate force and torque measurement at the femtonewton level, microrheology of complex fluids, single micro- and nano-particle spectroscopy, single-cell analysis, and statistical-physics experiments. This roadmap provides insights into current investigations involving optical forces and optical tweezers from their theoretical foundations to designs and setups. It also offers perspectives for applications to a wide range of research fields, from biophysics to space exploration.
- 1 April 2023
- Published by IOP Publishing in Journal of Physics: Photonics
- Vol. 5 (2) , 022501
Top Cited PapersOpen AccessRoadmap for optical tweezers
Optical tweezers are tools made of light that enable contactless pushing, trapping, and manipulation of objects, ranging from atoms to space light sails. Since the pioneering work by Arthur Ashkin in the 1970s, optical tweezers have evolved into sophisticated instruments and have been employed in a broad range of applications in the life sciences, physics, and engineering. These include accurate force and torque measurement at the femtonewton level, microrheology of complex fluids, single micro- and nano-particle spectroscopy, single-cell analysis, and statistical-physics experiments. This roadmap provides insights into current investigations involving optical forces and optical tweezers from their theoretical foundations to designs and setups. It also offers perspectives for applications to a wide range of research fields, from biophysics to space exploration.
- Open Access
- 15 January 2023
- Published by The Company of Biologists in Development
- Vol. 150 (2)
Primordial germ cells adjust their protrusion type while migrating in different tissue contexts in vivo
In both physiological processes and disease contexts, migrating cells have the ability to adapt to conditions in their environment. As an in vivo model for this process, we use zebrafish primordial germ cells that migrate throughout the developing embryo. When migrating within an ectodermal environment, the germ cells form fewer and smaller blebs when compared with their behavior within mesodermal environment. We find that cortical tension of neighboring cells is a parameter that affects blebbing frequency. Interestingly, the change in blebbing activity is accompanied by the formation of more actin-rich protrusions. These alterations in cell behavior that correlate with changes in RhoA activity could allow the cells to maintain dynamic motility parameters, such as migration speed and track straightness, in different settings. In addition, we find that the polarity of the cells can be affected by stiff structures positioned in their migration path This article has an associated ‘The people behind the papers’ interview.
- 15 January 2023
- Published by The Company of Biologists in Development
- Vol. 150 (2)
Open AccessPrimordial germ cells adjust their protrusion type while migrating in different tissue contexts in vivo
In both physiological processes and disease contexts, migrating cells have the ability to adapt to conditions in their environment. As an in vivo model for this process, we use zebrafish primordial germ cells that migrate throughout the developing embryo. When migrating within an ectodermal environment, the germ cells form fewer and smaller blebs when compared with their behavior within mesodermal environment. We find that cortical tension of neighboring cells is a parameter that affects blebbing frequency. Interestingly, the change in blebbing activity is accompanied by the formation of more actin-rich protrusions. These alterations in cell behavior that correlate with changes in RhoA activity could allow the cells to maintain dynamic motility parameters, such as migration speed and track straightness, in different settings. In addition, we find that the polarity of the cells can be affected by stiff structures positioned in their migration path This article has an associated ‘The people behind the papers’ interview.
- Open Access
- 20 February 2022
- Published by Wiley in Advanced Science
- Vol. 9 (12) , 2105325
Nonswelling and Hydrolytically Stable Hydrogels Uncover Cellular Mechanosensing in 3D
While matrix stiffness regulates cell behavior on 2D substrates, recent studies using synthetic hydrogels have suggested that in 3D environments, cell behavior is primarily impacted by matrix degradability, independent of stiffness. However, these studies did not consider the potential impact of other confounding matrix parameters that typically covary with changes in stiffness, particularly, hydrogel swelling and hydrolytic stability, which may explain the previously observed distinctions in cell response in 2D versus 3D settings. To investigate how cells sense matrix stiffness in 3D environments, a nonswelling, hydrolytically stable, linearly elastic synthetic hydrogel model is developed in which matrix stiffness and degradability can be tuned independently. It is found that matrix degradability regulates cell spreading kinetics, while matrix stiffness dictates the final spread area once cells achieve equilibrium spreading. Importantly, the differentiation of human mesenchymal stromal cells toward adipocytes or osteoblasts is regulated by the spread state of progenitor cells upon initiating differentiation. These studies uncover matrix stiffness as a major regulator of cell function not just in 2D, but also in 3D environments, and identify matrix degradability as a critical microenvironmental feature in 3D that in conjunction with matrix stiffness dictates cell spreading, cytoskeletal state, and stem cell differentiation outcomes.
- 20 February 2022
- Published by Wiley in Advanced Science
- Vol. 9 (12) , 2105325
Open AccessNonswelling and Hydrolytically Stable Hydrogels Uncover Cellular Mechanosensing in 3D
While matrix stiffness regulates cell behavior on 2D substrates, recent studies using synthetic hydrogels have suggested that in 3D environments, cell behavior is primarily impacted by matrix degradability, independent of stiffness. However, these studies did not consider the potential impact of other confounding matrix parameters that typically covary with changes in stiffness, particularly, hydrogel swelling and hydrolytic stability, which may explain the previously observed distinctions in cell response in 2D versus 3D settings. To investigate how cells sense matrix stiffness in 3D environments, a nonswelling, hydrolytically stable, linearly elastic synthetic hydrogel model is developed in which matrix stiffness and degradability can be tuned independently. It is found that matrix degradability regulates cell spreading kinetics, while matrix stiffness dictates the final spread area once cells achieve equilibrium spreading. Importantly, the differentiation of human mesenchymal stromal cells toward adipocytes or osteoblasts is regulated by the spread state of progenitor cells upon initiating differentiation. These studies uncover matrix stiffness as a major regulator of cell function not just in 2D, but also in 3D environments, and identify matrix degradability as a critical microenvironmental feature in 3D that in conjunction with matrix stiffness dictates cell spreading, cytoskeletal state, and stem cell differentiation outcomes.